BLASTX nr result

ID: Coptis21_contig00019007 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019007
         (646 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263559.1| PREDICTED: LOB domain-containing protein 16 ...   172   3e-51
ref|XP_003554283.1| PREDICTED: LOB domain-containing protein 16-...   177   6e-51
ref|XP_003521280.1| PREDICTED: LOB domain-containing protein 16-...   172   2e-49
ref|XP_002306833.1| predicted protein [Populus trichocarpa] gi|2...   174   3e-48
ref|XP_002302057.1| predicted protein [Populus trichocarpa] gi|2...   172   2e-47

>ref|XP_002263559.1| PREDICTED: LOB domain-containing protein 16 [Vitis vinifera]
           gi|297744118|emb|CBI37088.3| unnamed protein product
           [Vitis vinifera]
          Length = 195

 Score =  172 bits (436), Expect(2) = 3e-51
 Identities = 90/126 (71%), Positives = 97/126 (76%), Gaps = 1/126 (0%)
 Frame = +3

Query: 3   IFAPYFSSEQSSTRFAAIHKVFGASNVSKLLLHVPIPDRCEAVVTIAYEAQARIRDPVYG 182
           +FAPYF SEQ   RFAAIHKVFGASNVSKLLLHVP+ DRCEAVVTIAYEAQARIRDPVYG
Sbjct: 24  VFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHVPVADRCEAVVTIAYEAQARIRDPVYG 83

Query: 183 CVAHIFALQQQVGYLQNQLMQVKAQLSNNLVEAQSLGN-HQYWTGNLVGGAQNLLYPTYM 359
           CVAHIFALQQQV  LQ QLMQ+KAQL+NN       GN    W GN+ G      +P YM
Sbjct: 84  CVAHIFALQQQVACLQAQLMQLKAQLANN------TGNLENQWQGNVSGAPSFQNFPGYM 137

Query: 360 QSISPQ 377
            S+SPQ
Sbjct: 138 NSVSPQ 143



 Score = 55.5 bits (132), Expect(2) = 3e-51
 Identities = 27/52 (51%), Positives = 40/52 (76%)
 Frame = +1

Query: 382 SLESVDNSNDRESAMQDMQIREDISLQPCTRRRLTQNDLGELQAMALRMLRD 537
           SLE +D+++D  + MQD+Q R++ S Q C+R+R   NDLGELQ +ALRM+R+
Sbjct: 145 SLELIDHNSDGMT-MQDIQSRDEFSFQTCSRKRPPHNDLGELQELALRMMRN 195


>ref|XP_003554283.1| PREDICTED: LOB domain-containing protein 16-like [Glycine max]
          Length = 213

 Score =  177 bits (450), Expect(2) = 6e-51
 Identities = 93/129 (72%), Positives = 104/129 (80%), Gaps = 4/129 (3%)
 Frame = +3

Query: 3   IFAPYFSSEQSSTRFAAIHKVFGASNVSKLLLHVPIPDRCEAVVTIAYEAQARIRDPVYG 182
           IFAPYF SEQ   RFAAIHKVFGASNVSKLLLH+P  DRCEAVVTIAYEAQARIRDPVYG
Sbjct: 32  IFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHIPAHDRCEAVVTIAYEAQARIRDPVYG 91

Query: 183 CVAHIFALQQQVGYLQNQLMQVKAQLSNNLVEAQSLGNHQYWTGN---LVGGAQNLLY-P 350
           CV+HIFALQQQV  LQ QLMQVKAQL+ NLVE++++ ++  WTGN   + G   N  + P
Sbjct: 92  CVSHIFALQQQVACLQAQLMQVKAQLAQNLVESRNIESNHQWTGNNNSVSGQPMNHPFCP 151

Query: 351 TYMQSISPQ 377
           TYM  ISPQ
Sbjct: 152 TYMNPISPQ 160



 Score = 49.3 bits (116), Expect(2) = 6e-51
 Identities = 27/55 (49%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
 Frame = +1

Query: 376 RDSLESVDNSNDRES-AMQDMQIREDISLQPCTRRRLTQNDLGELQAMALRMLRD 537
           + SLES+D+S+  +  +MQD+Q RED  +Q    R    NDLGELQ +ALRM+R+
Sbjct: 160 QSSLESIDHSSINDGMSMQDIQSREDFQIQ-AKERPYNNNDLGELQELALRMMRN 213


>ref|XP_003521280.1| PREDICTED: LOB domain-containing protein 16-like [Glycine max]
          Length = 213

 Score =  172 bits (437), Expect(2) = 2e-49
 Identities = 91/129 (70%), Positives = 102/129 (79%), Gaps = 4/129 (3%)
 Frame = +3

Query: 3   IFAPYFSSEQSSTRFAAIHKVFGASNVSKLLLHVPIPDRCEAVVTIAYEAQARIRDPVYG 182
           IFAPYF SEQ   RFAAIHKVFGASNVSKLLLH+P  DRCEAVVTI YEAQARIRDPVYG
Sbjct: 32  IFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHIPAHDRCEAVVTITYEAQARIRDPVYG 91

Query: 183 CVAHIFALQQQVGYLQNQLMQVKAQLSNNLVEAQSLGNHQYWTG---NLVGGAQNLLY-P 350
           CV+HIFALQQQV  LQ QLMQVKAQL+ NLVE++++ N+ +  G   N+ G   N  + P
Sbjct: 92  CVSHIFALQQQVARLQAQLMQVKAQLTQNLVESRNIENNHHLQGNNNNVTGQLMNHPFCP 151

Query: 351 TYMQSISPQ 377
           TYM  ISPQ
Sbjct: 152 TYMNPISPQ 160



 Score = 49.3 bits (116), Expect(2) = 2e-49
 Identities = 27/55 (49%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
 Frame = +1

Query: 376 RDSLESVDNSNDRES-AMQDMQIREDISLQPCTRRRLTQNDLGELQAMALRMLRD 537
           + SLES+D+S+  +  +MQD+Q RED  +Q    R    NDLGELQ +ALRM+R+
Sbjct: 160 QSSLESIDHSSINDGMSMQDIQSREDFQIQ-AKERPYNNNDLGELQELALRMMRN 213


>ref|XP_002306833.1| predicted protein [Populus trichocarpa] gi|222856282|gb|EEE93829.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score =  174 bits (440), Expect(2) = 3e-48
 Identities = 89/129 (68%), Positives = 100/129 (77%), Gaps = 4/129 (3%)
 Frame = +3

Query: 3   IFAPYFSSEQSSTRFAAIHKVFGASNVSKLLLHVPIPDRCEAVVTIAYEAQARIRDPVYG 182
           IFAPYF SEQ   RFAAIHKVFGASNVSKLLLHVP+ +RCEAVVTIAYEAQARIRDPVYG
Sbjct: 27  IFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHVPVAERCEAVVTIAYEAQARIRDPVYG 86

Query: 183 CVAHIFALQQQVGYLQNQLMQVKAQLSNNLVEAQSLGN---HQYWTGNLVGGAQNL-LYP 350
           CVAHIFALQQQV  LQ QLMQVKAQL+ NL+++  +     H  W GN + G  +   +P
Sbjct: 87  CVAHIFALQQQVACLQAQLMQVKAQLAQNLIDSPRINAENIHHQWQGNNISGVPSFPTHP 146

Query: 351 TYMQSISPQ 377
            Y+  ISPQ
Sbjct: 147 NYINPISPQ 155



 Score = 44.3 bits (103), Expect(2) = 3e-48
 Identities = 25/55 (45%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
 Frame = +1

Query: 379 DSLESVDNSNDRESA-MQDMQIREDISLQPCTR-RRLTQNDLGELQAMALRMLRD 537
           DS++ + N+ DR    MQD+Q RE+ + Q   + +R   +DLGELQA+ALRM+R+
Sbjct: 159 DSVDLISNNIDRGMMNMQDIQSREEFAFQSRAKVKRPCNSDLGELQALALRMMRN 213


>ref|XP_002302057.1| predicted protein [Populus trichocarpa] gi|222843783|gb|EEE81330.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score =  172 bits (436), Expect(2) = 2e-47
 Identities = 89/129 (68%), Positives = 100/129 (77%), Gaps = 4/129 (3%)
 Frame = +3

Query: 3   IFAPYFSSEQSSTRFAAIHKVFGASNVSKLLLHVPIPDRCEAVVTIAYEAQARIRDPVYG 182
           IFAPYF SEQ + RFAAIHKVFGASNVSKLLLHVP+ DR EAVVTIAYEAQARIRDPVYG
Sbjct: 27  IFAPYFCSEQGTARFAAIHKVFGASNVSKLLLHVPVADRYEAVVTIAYEAQARIRDPVYG 86

Query: 183 CVAHIFALQQQVGYLQNQLMQVKAQLSNNLVEAQSL---GNHQYWTGNLVGGAQNL-LYP 350
           CVAHIF+LQQQV  LQ QLMQVKAQL+ NL+++  +     H  W GN + G  +   Y 
Sbjct: 87  CVAHIFSLQQQVACLQAQLMQVKAQLAQNLIDSTRINIENTHHQWQGNNISGVSSFPSYQ 146

Query: 351 TYMQSISPQ 377
           TY+  ISPQ
Sbjct: 147 TYINPISPQ 155



 Score = 42.7 bits (99), Expect(2) = 2e-47
 Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 5/59 (8%)
 Frame = +1

Query: 376 RDSLESVDNSNDRESA----MQDMQIREDISLQPCTR-RRLTQNDLGELQAMALRMLRD 537
           + SL+SVD +N         MQD++  E+ + Q C + +R   +DLGELQA+ALRM+R+
Sbjct: 155 QSSLDSVDLNNSNIDHGMMDMQDIKSGEEFAFQSCAKVKRPYNSDLGELQALALRMMRN 213


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