BLASTX nr result
ID: Coptis21_contig00018989
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00018989
(1531 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002451486.1| hypothetical protein SORBIDRAFT_04g002725 [S... 243 1e-61
gb|AEF33496.1| putative transposase [Saccharum hybrid cultivar R... 236 1e-59
ref|NP_001060325.2| Os07g0624100 [Oryza sativa Japonica Group] g... 215 2e-53
gb|AAO18461.1| hypothetical protein [Oryza sativa Japonica Group] 215 3e-53
ref|NP_001051732.2| Os03g0822100 [Oryza sativa Japonica Group] g... 215 3e-53
>ref|XP_002451486.1| hypothetical protein SORBIDRAFT_04g002725 [Sorghum bicolor]
gi|241931317|gb|EES04462.1| hypothetical protein
SORBIDRAFT_04g002725 [Sorghum bicolor]
Length = 604
Score = 243 bits (620), Expect = 1e-61
Identities = 129/403 (32%), Positives = 238/403 (59%), Gaps = 9/403 (2%)
Frame = +1
Query: 334 KSDSWNHFDVVDVKKDDGTLETKARCRYCRKLMSCVASNGTSHLRRHTESCLSK-KTHSI 510
+S W D + DG + + RC++C ++ + ++GTSH+RRH E+C + K H +
Sbjct: 6 RSAIWKDMDPI---YQDGKV-IQGRCKHCYEVFAAARTSGTSHMRRHLENCEPRLKMHDL 61
Query: 511 RPEQVTTTPPGEVVVNSPFDQAQACRDTAKLVIELELPFSWAEDSHFEEWVHSFNPHLEP 690
+ + + V+ N FD + +L++ ELPFS+ E F + S NP E
Sbjct: 62 VEKLQSVSTESAVLTNWRFDPKLTRCELVRLIVLHELPFSFVEYDGFRRYSASLNPLAET 121
Query: 691 ISRHTIKDIVLEKFEEEKSVLRSLLQSISGKVCLTSTLWTTDQSMGYVCITAHFVDQDWK 870
+SR TIK+ +LE ++ ++ L+ + ++ + + LT+ LWT++Q++GY+C+T H++D DWK
Sbjct: 122 VSRTTIKENILEAYKNHRTALKEMFENCNFRFSLTADLWTSNQNIGYMCVTCHYIDDDWK 181
Query: 871 LNKRTISFPMPEYPNTEFTIFEAIYSSILSWNLSEKVFTITLDDDISTDVTRRLKDLLFT 1050
+ KR I F + + P+ F ++ ++ +I +N+ +K+F+ITLD+ S + + D+L
Sbjct: 182 VQKRIIKFCVVKTPHDGFNLYTSMLRTIRFYNIEDKLFSITLDNATSNNT---MMDILKA 238
Query: 1051 N------NHSLGEQLFHVRCSTYILNKIVDEGLEGIHHSLENIRRSIRHVRSSKVNLQKF 1212
N H G+ LFHVRC+ +++N IV +GL+ I + NIR S++++R S+ +KF
Sbjct: 239 NLLKMDLLHCDGD-LFHVRCAAHVINLIVKDGLQAIDGVINNIRESVKYIRGSQSRKEKF 297
Query: 1213 RELCKRAGMIYKNLPP-DIPCHWNTTYYMLDAAIPYQRIF-ELFFYDSIHDFIPSIIDWK 1386
++ + G+ ++ P D+ WN+TY M+ +A+P++ F EL DS + + PS DW+
Sbjct: 298 EDIIEELGIRCRSAPQIDVANRWNSTYDMIQSAMPFKDAFLELKVKDSNYTYCPSSQDWQ 357
Query: 1387 NATVMRDLLKAFCESSKLFSGISNVSSSKFCHQLSNICLILSK 1515
A + LLK F +++K+ SG + +S+ + HQ+ ++ +L +
Sbjct: 358 RANAVCKLLKVFKKATKVVSGSTYPTSNLYFHQIWSVRQVLEE 400
>gb|AEF33496.1| putative transposase [Saccharum hybrid cultivar R570]
Length = 607
Score = 236 bits (602), Expect = 1e-59
Identities = 129/404 (31%), Positives = 236/404 (58%), Gaps = 10/404 (2%)
Frame = +1
Query: 334 KSDSWNHFDVVDVKKDDGTLETKARCRYCRKLMSCVASNGTSHLRRHTESCLSK-KTHSI 510
+S W D + DG + + RC++C ++ + ++GTSH+RRH E C + K H
Sbjct: 9 RSAIWKDMDPI---YQDGKV-IQGRCKHCYEVFAAARTSGTSHMRRHLEICEPRLKMHDF 64
Query: 511 RPE-QVTTTPPGEVVVNSPFDQAQACRDTAKLVIELELPFSWAEDSHFEEWVHSFNPHLE 687
+ Q + T ++ N FD + +L++ ELPFS+ E F + S NP E
Sbjct: 65 VDKLQSSVTTKSAILTNWRFDPKLTRCELVRLIVLHELPFSFVEYDEFRSYSASLNPLAE 124
Query: 688 PISRHTIKDIVLEKFEEEKSVLRSLLQSISGKVCLTSTLWTTDQSMGYVCITAHFVDQDW 867
+SR TIK+ LE ++ ++ LR + ++ + + LT+ LWT++Q++GY+C+T H++D DW
Sbjct: 125 TVSRTTIKENYLEAYKNHRTTLREMFENCNFRFSLTADLWTSNQNIGYMCVTCHYIDDDW 184
Query: 868 KLNKRTISFPMPEYPNTEFTIFEAIYSSILSWNLSEKVFTITLDDDISTDVTRRLKDLLF 1047
K+ KR I F + + P+ F ++ ++ +I +N+ +K+F+ITLD+ + + + D+L
Sbjct: 185 KVRKRIIRFCVVKTPHDGFNLYTSMLRTIKFYNIEDKLFSITLDNAATNNT---MMDILK 241
Query: 1048 TN------NHSLGEQLFHVRCSTYILNKIVDEGLEGIHHSLENIRRSIRHVRSSKVNLQK 1209
N H G+ LFH+RC+ +++N IV +GL+ I + NIR S+++VR+S+ +K
Sbjct: 242 ANLLKMDMLHCDGD-LFHIRCAAHVINLIVKDGLQAIDGVINNIRESVKYVRASQSRKEK 300
Query: 1210 FRELCKRAGMIYKNLPP-DIPCHWNTTYYMLDAAIPYQRIF-ELFFYDSIHDFIPSIIDW 1383
F ++ G+ +++P D+ WN+T M+++A+P++ F EL DS + + PS DW
Sbjct: 301 FEDIVVELGIRCRSVPKIDVENRWNSTCDMIESAMPFKEAFLELKVKDSNYSYCPSSQDW 360
Query: 1384 KNATVMRDLLKAFCESSKLFSGISNVSSSKFCHQLSNICLILSK 1515
+ A + LLK F ++ ++ SG S +S+ + H++ +I +L +
Sbjct: 361 ERANAVCKLLKVFKKAMEVVSGTSYPTSNLYFHEIWSIKQVLEE 404
>ref|NP_001060325.2| Os07g0624100 [Oryza sativa Japonica Group]
gi|255677983|dbj|BAF22239.2| Os07g0624100 [Oryza sativa
Japonica Group]
Length = 762
Score = 215 bits (548), Expect = 2e-53
Identities = 119/405 (29%), Positives = 222/405 (54%), Gaps = 8/405 (1%)
Frame = +1
Query: 340 DSWNHFDVVDVKKDDGTLETKARCRYCRKLMSCVASNGTSHLRRHTESCLSKKTHSIRPE 519
++W F + + + G +C++C + GTS LR+H C K+ +++
Sbjct: 125 EAWKEFVPILIDNEVGA----GKCKHCDTEIRAKRGAGTSSLRKHLTRC-KKRISALKIV 179
Query: 520 ---QVTTTPPGEV-VVNSPFDQAQACRDTAKLVIELELPFSWAEDSHFEEWVHSFNPHLE 687
T P V + N FD + ++ ++++ ELPF + E F + S NP+ +
Sbjct: 180 GNLDFTLMSPNSVRLKNWSFDPEVSRKELMRMIVLHELPFQFVEYDGFRSFAASLNPYFK 239
Query: 688 PISRHTIKDIVLEKFEEEKSVLRSLLQSISGKVCLTSTLWTTDQSMGYVCITAHFVDQDW 867
ISR TI++ + F+E+K ++ + + + + LT+ +WT++Q+MGY+C+T HF+D DW
Sbjct: 240 IISRTTIRNDCIAAFKEQKLAMKDMFKGANCRFSLTADMWTSNQTMGYMCVTCHFIDTDW 299
Query: 868 KLNKRTISFPMPEYPNTEFTIFEAIYSSILSWNLSEKVFTITLDDDISTDVTRRLK--DL 1041
++ KR I F + P+T +F A+ S I WN+++K+F++TLD+ + D +L +L
Sbjct: 300 RVQKRIIKFFGVKTPHTGVQMFNAMLSCIQDWNIADKIFSVTLDNASANDSMAKLLKCNL 359
Query: 1042 LFTNNHSLGEQLFHVRCSTYILNKIVDEGLEGIHHSLENIRRSIRHVRSSKVNLQKFREL 1221
G +L H RC +++N I +GL+ I + NIR S++++ +S +KF E+
Sbjct: 360 KAKKTIPAGGKLLHNRCVAHVINLIAKDGLKVIDSIVCNIRESVKYMDNSPSRKEKFEEI 419
Query: 1222 CKRAGMIYKNLPP-DIPCHWNTTYYMLDAAIPYQRIF-ELFFYDSIHDFIPSIIDWKNAT 1395
+ G+ + P D+ HWN+TY ML+AA P+ R + L + + + PS W+ AT
Sbjct: 420 IAQEGITCELHPTVDVCTHWNSTYLMLNAAFPFMRAYASLVVQEKNYKYAPSPDQWERAT 479
Query: 1396 VMRDLLKAFCESSKLFSGISNVSSSKFCHQLSNICLILSKYENDS 1530
++ +LK +++ + SG +S+ + H++ I L+L K +++
Sbjct: 480 IVSGILKVLYDATMVVSGSLYPTSNLYFHEMWKIKLVLDKERSNN 524
>gb|AAO18461.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 669
Score = 215 bits (547), Expect = 3e-53
Identities = 118/407 (28%), Positives = 223/407 (54%), Gaps = 8/407 (1%)
Frame = +1
Query: 334 KSDSWNHFDVVDVKKDDGTLETKARCRYCRKLMSCVASNGTSHLRRHTESCLSKKTHSIR 513
+S++W F + + + G +C++C + GTS LR+H C K+ +++
Sbjct: 160 RSEAWKEFVPILIDNEVGA----GKCKHCDTEIRAKRGAGTSSLRKHLTRC-KKRISALK 214
Query: 514 P----EQVTTTPPGEVVVNSPFDQAQACRDTAKLVIELELPFSWAEDSHFEEWVHSFNPH 681
+ +P + N FD + ++ ++++ ELPF + E F + S NP+
Sbjct: 215 IVGNLDSTLMSPNSVRLKNWSFDPEVSRKELMRMIVLHELPFQFVEYDGFRSFAASLNPY 274
Query: 682 LEPISRHTIKDIVLEKFEEEKSVLRSLLQSISGKVCLTSTLWTTDQSMGYVCITAHFVDQ 861
+ ISR TI++ + F+E+K ++ + + + + LT+ +WT++Q+MGY+C+T HF+D
Sbjct: 275 FKIISRTTIRNDCIAAFKEQKLAMKDMFKGANCRFSLTADMWTSNQTMGYMCVTCHFIDT 334
Query: 862 DWKLNKRTISFPMPEYPNTEFTIFEAIYSSILSWNLSEKVFTITLDDDISTDVTRRLK-- 1035
DW++ KR I F + P+T +F A+ S I WN+++K+F++TLD + D +L
Sbjct: 335 DWRVQKRIIKFFGVKTPHTGVQMFNAMLSCIQDWNIADKIFSVTLDYASANDSMAKLLKC 394
Query: 1036 DLLFTNNHSLGEQLFHVRCSTYILNKIVDEGLEGIHHSLENIRRSIRHVRSSKVNLQKFR 1215
+L G +L H RC+T+++N I +GL+ I + NIR S+++ +S +KF
Sbjct: 395 NLKAKKTIPAGGKLLHNRCATHVINLIAKDGLKVIDSIVCNIRESVKYRDNSLSRKEKFE 454
Query: 1216 ELCKRAGMIYKNLPP-DIPCHWNTTYYMLDAAIPYQRIF-ELFFYDSIHDFIPSIIDWKN 1389
E+ + G+ + P D+ WN+TY ML+AA P+ R + L D + + PS W+
Sbjct: 455 EIIAQEGITCELHPTVDVCTRWNSTYLMLNAAFPFMRAYASLAVQDKNYKYAPSPDQWER 514
Query: 1390 ATVMRDLLKAFCESSKLFSGISNVSSSKFCHQLSNICLILSKYENDS 1530
+T++ +LK +++ + SG +S+ + H++ I L+L K +++
Sbjct: 515 STIVSGILKVLYDATMVVSGSLYPTSNLYFHEMWKIKLVLDKEHSNN 561
>ref|NP_001051732.2| Os03g0822100 [Oryza sativa Japonica Group]
gi|108711807|gb|ABF99602.1| BED zinc finger family
protein, expressed [Oryza sativa Japonica Group]
gi|108711808|gb|ABF99603.1| BED zinc finger family
protein, expressed [Oryza sativa Japonica Group]
gi|215704882|dbj|BAG94910.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|255675011|dbj|BAF13646.2| Os03g0822100 [Oryza sativa
Japonica Group]
Length = 612
Score = 215 bits (547), Expect = 3e-53
Identities = 118/407 (28%), Positives = 223/407 (54%), Gaps = 8/407 (1%)
Frame = +1
Query: 334 KSDSWNHFDVVDVKKDDGTLETKARCRYCRKLMSCVASNGTSHLRRHTESCLSKKTHSIR 513
+S++W F + + + G +C++C + GTS LR+H C K+ +++
Sbjct: 103 RSEAWKEFVPILIDNEVGA----GKCKHCDTEIRAKRGAGTSSLRKHLTRC-KKRISALK 157
Query: 514 P----EQVTTTPPGEVVVNSPFDQAQACRDTAKLVIELELPFSWAEDSHFEEWVHSFNPH 681
+ +P + N FD + ++ ++++ ELPF + E F + S NP+
Sbjct: 158 IVGNLDSTLMSPNSVRLKNWSFDPEVSRKELMRMIVLHELPFQFVEYDGFRSFAASLNPY 217
Query: 682 LEPISRHTIKDIVLEKFEEEKSVLRSLLQSISGKVCLTSTLWTTDQSMGYVCITAHFVDQ 861
+ ISR TI++ + F+E+K ++ + + + + LT+ +WT++Q+MGY+C+T HF+D
Sbjct: 218 FKIISRTTIRNDCIAAFKEQKLAMKDMFKGANCRFSLTADMWTSNQTMGYMCVTCHFIDT 277
Query: 862 DWKLNKRTISFPMPEYPNTEFTIFEAIYSSILSWNLSEKVFTITLDDDISTDVTRRLK-- 1035
DW++ KR I F + P+T +F A+ S I WN+++K+F++TLD + D +L
Sbjct: 278 DWRVQKRIIKFFGVKTPHTGVQMFNAMLSCIQDWNIADKIFSVTLDYASANDSMAKLLKC 337
Query: 1036 DLLFTNNHSLGEQLFHVRCSTYILNKIVDEGLEGIHHSLENIRRSIRHVRSSKVNLQKFR 1215
+L G +L H RC+T+++N I +GL+ I + NIR S+++ +S +KF
Sbjct: 338 NLKAKKTIPAGGKLLHNRCATHVINLIAKDGLKVIDSIVCNIRESVKYRDNSLSRKEKFE 397
Query: 1216 ELCKRAGMIYKNLPP-DIPCHWNTTYYMLDAAIPYQRIF-ELFFYDSIHDFIPSIIDWKN 1389
E+ + G+ + P D+ WN+TY ML+AA P+ R + L D + + PS W+
Sbjct: 398 EIIAQEGITCELHPTVDVCTRWNSTYLMLNAAFPFMRAYASLAVQDKNYKYAPSPDQWER 457
Query: 1390 ATVMRDLLKAFCESSKLFSGISNVSSSKFCHQLSNICLILSKYENDS 1530
+T++ +LK +++ + SG +S+ + H++ I L+L K +++
Sbjct: 458 STIVSGILKVLYDATMVVSGSLYPTSNLYFHEMWKIKLVLDKEHSNN 504