BLASTX nr result

ID: Coptis21_contig00018915 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018915
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528212.1| PREDICTED: zinc finger Ran-binding domain-co...   195   4e-48
ref|XP_002281382.2| PREDICTED: zinc finger Ran-binding domain-co...   192   2e-47
emb|CBI15155.3| unnamed protein product [Vitis vinifera]              192   2e-47
ref|XP_002514699.1| ATP binding protein, putative [Ricinus commu...   186   1e-45
ref|XP_004155056.1| PREDICTED: LOW QUALITY PROTEIN: DNA annealin...   182   3e-44

>ref|XP_003528212.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like
            [Glycine max]
          Length = 1193

 Score =  195 bits (495), Expect = 4e-48
 Identities = 95/152 (62%), Positives = 115/152 (75%), Gaps = 4/152 (2%)
 Frame = -2

Query: 470  KVEHGVCRGCGLDCHKLVRFIRPLSVARRKEYIVKVAPKVASDKRLLDKLVNEPREGNAW 291
            K+EHGVC  C  DCHKLV  IRPLS+ RR+EYI KVAPKVA  K++ +KLVNEP EGNAW
Sbjct: 1040 KIEHGVCTNCQFDCHKLVEDIRPLSLERRREYIEKVAPKVAKRKKMFEKLVNEPTEGNAW 1099

Query: 290  HADHMVAVYKGGGECTVDNMRTLCVACHKEVTAAQAAERRVTRINAKKRLKGILCGLSNG 111
            HADH+V VY GGGEC ++N+RTLCVACH +VTAAQ AERR+ + NA+K+LK ++  + NG
Sbjct: 1100 HADHIVPVYDGGGECKLENLRTLCVACHYDVTAAQCAERRIAKANARKQLKALMNSMKNG 1159

Query: 110  SK----IETINSSLMVDDEDELLVKVPGSAYT 27
             K      T     MV  EDELLV+VPGSAY+
Sbjct: 1160 IKGATGTNTKEEGSMV--EDELLVEVPGSAYS 1189


>ref|XP_002281382.2| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like
            [Vitis vinifera]
          Length = 1280

 Score =  192 bits (489), Expect = 2e-47
 Identities = 95/160 (59%), Positives = 123/160 (76%), Gaps = 9/160 (5%)
 Frame = -2

Query: 470  KVEHGVCRGCGLDCHKLVRFIRPLSVARRKEYIVKVAPKVASDKRLLDKLVNEPREGNAW 291
            ++EHG+C  C LDCHKLV++I+PLS+  R+EYI KVAP++A  K LLDKLVN+P EGNAW
Sbjct: 1091 QIEHGICTSCQLDCHKLVQYIKPLSLTGRREYIEKVAPRLAVRKNLLDKLVNDPTEGNAW 1150

Query: 290  HADHMVAVYKGGGECTVDNMRTLCVACHKEVTAAQAAERRVTRINAKKRLKGILCGLSNG 111
            HADH+V VY+GGGEC ++NMRTLCV CH +VTAAQ AERR  RI AKK+LK I+  L + 
Sbjct: 1151 HADHIVPVYQGGGECRLENMRTLCVGCHSDVTAAQCAERRSVRIKAKKQLKVIMNSLKDD 1210

Query: 110  SKIE-TINSS-----LMVDD---EDELLVKVPGSAYTGSE 18
            +K++ T  +S     L + +   EDELL+KVPGSAY+G +
Sbjct: 1211 AKMKHTCGNSKNQGHLEIHEDILEDELLIKVPGSAYSGQK 1250


>emb|CBI15155.3| unnamed protein product [Vitis vinifera]
          Length = 1201

 Score =  192 bits (489), Expect = 2e-47
 Identities = 95/160 (59%), Positives = 123/160 (76%), Gaps = 9/160 (5%)
 Frame = -2

Query: 470  KVEHGVCRGCGLDCHKLVRFIRPLSVARRKEYIVKVAPKVASDKRLLDKLVNEPREGNAW 291
            ++EHG+C  C LDCHKLV++I+PLS+  R+EYI KVAP++A  K LLDKLVN+P EGNAW
Sbjct: 1012 QIEHGICTSCQLDCHKLVQYIKPLSLTGRREYIEKVAPRLAVRKNLLDKLVNDPTEGNAW 1071

Query: 290  HADHMVAVYKGGGECTVDNMRTLCVACHKEVTAAQAAERRVTRINAKKRLKGILCGLSNG 111
            HADH+V VY+GGGEC ++NMRTLCV CH +VTAAQ AERR  RI AKK+LK I+  L + 
Sbjct: 1072 HADHIVPVYQGGGECRLENMRTLCVGCHSDVTAAQCAERRSVRIKAKKQLKVIMNSLKDD 1131

Query: 110  SKIE-TINSS-----LMVDD---EDELLVKVPGSAYTGSE 18
            +K++ T  +S     L + +   EDELL+KVPGSAY+G +
Sbjct: 1132 AKMKHTCGNSKNQGHLEIHEDILEDELLIKVPGSAYSGQK 1171


>ref|XP_002514699.1| ATP binding protein, putative [Ricinus communis]
            gi|223546303|gb|EEF47805.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 1229

 Score =  186 bits (473), Expect = 1e-45
 Identities = 94/155 (60%), Positives = 118/155 (76%), Gaps = 7/155 (4%)
 Frame = -2

Query: 470  KVEHGVCRGCGLDCHKLVRFIRPLSVARRKEYIVKVAPKVASDKRLLDKLVNEPREGNAW 291
            ++E+GVC  C LDCHKLV+ I+PL++ RR+EYI KVAP +AS K+L DKLVN P EGNAW
Sbjct: 1057 QIEYGVCTNCQLDCHKLVKTIQPLTLERRREYIEKVAPNLASRKKLFDKLVNAPSEGNAW 1116

Query: 290  HADHMVAVYKGGGECTVDNMRTLCVACHKEVTAAQAAERRVTRINAKKRLKGILCGLSNG 111
            HADH++ VY+GGGEC ++NMRTLCVACH +VTAAQ AERR T   A+ +LK I+  L + 
Sbjct: 1117 HADHIIPVYRGGGECRLENMRTLCVACHYDVTAAQRAERRATWAKARAQLKIIMNNLKSD 1176

Query: 110  SKIETINSSL-------MVDDEDELLVKVPGSAYT 27
             K+E+ +SS        MV  EDELLVKVPGSAY+
Sbjct: 1177 QKMESDSSSKGQGHSEDMV--EDELLVKVPGSAYS 1209


>ref|XP_004155056.1| PREDICTED: LOW QUALITY PROTEIN: DNA annealing helicase and
            endonuclease ZRANB3-like [Cucumis sativus]
          Length = 1241

 Score =  182 bits (461), Expect = 3e-44
 Identities = 88/157 (56%), Positives = 115/157 (73%), Gaps = 9/157 (5%)
 Frame = -2

Query: 470  KVEHGVCRGCGLDCHKLVRFIRPLSVARRKEYIVKVAPKVASDKRLLDKLVNEPREGNAW 291
            ++EHGVC  C LDCHKLV+ I+PL++  R++YI KVAP +AS K+LL+K+VN P EGNAW
Sbjct: 1064 QMEHGVCSNCRLDCHKLVKHIQPLTLDMRRDYIEKVAPNLASRKKLLEKIVNNPTEGNAW 1123

Query: 290  HADHMVAVYKGGGECTVDNMRTLCVACHKEVTAAQAAERRVTRINAKKRLKGILCGLSNG 111
            HADH+V VY+GGGEC ++NMRTLCVACH +VTA Q AERR+ R+ AKK+LK  +  +  G
Sbjct: 1124 HADHIVPVYRGGGECRLENMRTLCVACHFDVTAEQRAERRLVRLKAKKQLKDAIIDIKKG 1183

Query: 110  SKIETINSSL--MVDDEDE-------LLVKVPGSAYT 27
                 I++ +   V DE E       +LVKVPGSAY+
Sbjct: 1184 GNTGRIDTDIQKQVHDEQESVIDDQLILVKVPGSAYS 1220


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