BLASTX nr result

ID: Coptis21_contig00018876 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018876
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314018.1| predicted protein [Populus trichocarpa] gi|2...   151   6e-35
ref|XP_002523229.1| cysteine desulfurylase, putative [Ricinus co...   150   1e-34
gb|ABK25420.1| unknown [Picea sitchensis]                             149   3e-34
ref|XP_002267920.1| PREDICTED: cysteine desulfurase 2, chloropla...   147   9e-34
ref|XP_004140178.1| PREDICTED: cysteine desulfurase 2, chloropla...   145   3e-33

>ref|XP_002314018.1| predicted protein [Populus trichocarpa] gi|222850426|gb|EEE87973.1|
           predicted protein [Populus trichocarpa]
          Length = 469

 Score =  151 bits (381), Expect = 6e-35
 Identities = 74/86 (86%), Positives = 78/86 (90%)
 Frame = +2

Query: 2   GAGFLYGKSKVLSRMPPFLGGGEMISDVFLDHSTYAERPPSRFEAGTPAIGEVIGLGAAI 181
           G GFLYGKS +LS MPPFLGGGEMISDVFLDHSTYAE PPSRFEAGTPAIGE IGLGAAI
Sbjct: 287 GVGFLYGKSDILSTMPPFLGGGEMISDVFLDHSTYAE-PPSRFEAGTPAIGEAIGLGAAI 345

Query: 182 DYLSGIGMQKIHDYETELATYLHESL 259
           DYL GIGMQKIH+YE ELA YL+E+L
Sbjct: 346 DYLQGIGMQKIHEYEMELANYLYENL 371


>ref|XP_002523229.1| cysteine desulfurylase, putative [Ricinus communis]
           gi|223537525|gb|EEF39150.1| cysteine desulfurylase,
           putative [Ricinus communis]
          Length = 469

 Score =  150 bits (379), Expect = 1e-34
 Identities = 74/86 (86%), Positives = 78/86 (90%)
 Frame = +2

Query: 2   GAGFLYGKSKVLSRMPPFLGGGEMISDVFLDHSTYAERPPSRFEAGTPAIGEVIGLGAAI 181
           G GFLYGKS +LS MPPFLGGGEMI+DVFLDHSTYA+ PPSRFEAGTPAIGE IGLGAAI
Sbjct: 287 GIGFLYGKSDILSTMPPFLGGGEMIADVFLDHSTYAD-PPSRFEAGTPAIGEAIGLGAAI 345

Query: 182 DYLSGIGMQKIHDYETELATYLHESL 259
           DYL GIGMQKIHDYE ELA YL+ESL
Sbjct: 346 DYLLGIGMQKIHDYEMELANYLYESL 371


>gb|ABK25420.1| unknown [Picea sitchensis]
          Length = 485

 Score =  149 bits (375), Expect = 3e-34
 Identities = 72/86 (83%), Positives = 80/86 (93%)
 Frame = +2

Query: 2   GAGFLYGKSKVLSRMPPFLGGGEMISDVFLDHSTYAERPPSRFEAGTPAIGEVIGLGAAI 181
           G GFLYGKS++L+ MPPFLGGGEMI+DVFLDHSTYAE PPSRFEAGTPAIGE IGLGAAI
Sbjct: 303 GIGFLYGKSELLTSMPPFLGGGEMIADVFLDHSTYAE-PPSRFEAGTPAIGEAIGLGAAI 361

Query: 182 DYLSGIGMQKIHDYETELATYLHESL 259
           DYLSGIGMQ+IH+YE ELA YL++SL
Sbjct: 362 DYLSGIGMQRIHEYELELANYLYQSL 387


>ref|XP_002267920.1| PREDICTED: cysteine desulfurase 2, chloroplastic [Vitis vinifera]
           gi|296083920|emb|CBI24308.3| unnamed protein product
           [Vitis vinifera]
          Length = 463

 Score =  147 bits (371), Expect = 9e-34
 Identities = 73/86 (84%), Positives = 77/86 (89%)
 Frame = +2

Query: 2   GAGFLYGKSKVLSRMPPFLGGGEMISDVFLDHSTYAERPPSRFEAGTPAIGEVIGLGAAI 181
           G GFLYGKS +L  MPPFLGGGEMISDVFLDHST+AE PPSRFEAGTPAIGE IGLGAAI
Sbjct: 281 GIGFLYGKSDLLFAMPPFLGGGEMISDVFLDHSTFAE-PPSRFEAGTPAIGEAIGLGAAI 339

Query: 182 DYLSGIGMQKIHDYETELATYLHESL 259
           DYLS IGMQKIHDYE +LA YL+ESL
Sbjct: 340 DYLSAIGMQKIHDYEVDLANYLYESL 365


>ref|XP_004140178.1| PREDICTED: cysteine desulfurase 2, chloroplastic-like [Cucumis
           sativus] gi|449481029|ref|XP_004156061.1| PREDICTED:
           cysteine desulfurase 2, chloroplastic-like [Cucumis
           sativus]
          Length = 485

 Score =  145 bits (367), Expect = 3e-33
 Identities = 72/86 (83%), Positives = 77/86 (89%)
 Frame = +2

Query: 2   GAGFLYGKSKVLSRMPPFLGGGEMISDVFLDHSTYAERPPSRFEAGTPAIGEVIGLGAAI 181
           G GFLYGK  +LS MPPFLGGGEMISDVFLDHST+A+ PPSRFEAGTPAIGE IGLGAAI
Sbjct: 303 GIGFLYGKIDLLSAMPPFLGGGEMISDVFLDHSTFAQ-PPSRFEAGTPAIGEAIGLGAAI 361

Query: 182 DYLSGIGMQKIHDYETELATYLHESL 259
           DYLSGIGMQKIH YE ELA YL+E+L
Sbjct: 362 DYLSGIGMQKIHSYEEELANYLYENL 387


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