BLASTX nr result

ID: Coptis21_contig00018825 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018825
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511558.1| conserved hypothetical protein [Ricinus comm...   116   2e-24
ref|XP_002330097.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_002318604.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
gb|ABK93021.1| unknown [Populus trichocarpa]                          116   2e-24
ref|XP_004137403.1| PREDICTED: microtubule-associated protein RP...   113   1e-23

>ref|XP_002511558.1| conserved hypothetical protein [Ricinus communis]
           gi|223550673|gb|EEF52160.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 249

 Score =  116 bits (291), Expect = 2e-24
 Identities = 56/61 (91%), Positives = 58/61 (95%)
 Frame = +1

Query: 142 MATNIGMMDGAYFVGRNEILTWINATLQLNLSRIEEAASGAVQCQMMDMTHPGVVPMHKV 321
           MA+NIGMMD AYFVGRNEILTWIN  LQLNLSRIEEAASGAVQCQMMDMT+PGVVPMHKV
Sbjct: 1   MASNIGMMDSAYFVGRNEILTWINNRLQLNLSRIEEAASGAVQCQMMDMTYPGVVPMHKV 60

Query: 322 N 324
           N
Sbjct: 61  N 61


>ref|XP_002330097.1| predicted protein [Populus trichocarpa] gi|222871231|gb|EEF08362.1|
           predicted protein [Populus trichocarpa]
          Length = 274

 Score =  116 bits (291), Expect = 2e-24
 Identities = 56/61 (91%), Positives = 58/61 (95%)
 Frame = +1

Query: 142 MATNIGMMDGAYFVGRNEILTWINATLQLNLSRIEEAASGAVQCQMMDMTHPGVVPMHKV 321
           MA+NIGMMD AYFVGRNEILTWIN  LQLNLSRIEEAASGAVQCQMMDMT+PGVVPMHKV
Sbjct: 1   MASNIGMMDSAYFVGRNEILTWINNRLQLNLSRIEEAASGAVQCQMMDMTYPGVVPMHKV 60

Query: 322 N 324
           N
Sbjct: 61  N 61


>ref|XP_002318604.1| predicted protein [Populus trichocarpa] gi|222859277|gb|EEE96824.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score =  116 bits (291), Expect = 2e-24
 Identities = 56/61 (91%), Positives = 58/61 (95%)
 Frame = +1

Query: 142 MATNIGMMDGAYFVGRNEILTWINATLQLNLSRIEEAASGAVQCQMMDMTHPGVVPMHKV 321
           MA+NIGMMD AYFVGRNEILTWIN  LQLNLSRIEEAASGAVQCQMMDMT+PGVVPMHKV
Sbjct: 1   MASNIGMMDSAYFVGRNEILTWINNRLQLNLSRIEEAASGAVQCQMMDMTYPGVVPMHKV 60

Query: 322 N 324
           N
Sbjct: 61  N 61


>gb|ABK93021.1| unknown [Populus trichocarpa]
          Length = 276

 Score =  116 bits (291), Expect = 2e-24
 Identities = 56/61 (91%), Positives = 58/61 (95%)
 Frame = +1

Query: 142 MATNIGMMDGAYFVGRNEILTWINATLQLNLSRIEEAASGAVQCQMMDMTHPGVVPMHKV 321
           MA+NIGMMD AYFVGRNEILTWIN  LQLNLSRIEEAASGAVQCQMMDMT+PGVVPMHKV
Sbjct: 1   MASNIGMMDSAYFVGRNEILTWINNRLQLNLSRIEEAASGAVQCQMMDMTYPGVVPMHKV 60

Query: 322 N 324
           N
Sbjct: 61  N 61


>ref|XP_004137403.1| PREDICTED: microtubule-associated protein RP/EB family member
           1B-like [Cucumis sativus]
           gi|449531603|ref|XP_004172775.1| PREDICTED:
           microtubule-associated protein RP/EB family member
           1B-like [Cucumis sativus]
          Length = 272

 Score =  113 bits (283), Expect = 1e-23
 Identities = 54/61 (88%), Positives = 57/61 (93%)
 Frame = +1

Query: 142 MATNIGMMDGAYFVGRNEILTWINATLQLNLSRIEEAASGAVQCQMMDMTHPGVVPMHKV 321
           MA+NIGMMD AYFVGRNEILTWIN  LQLNLSRIEEAASGAVQCQM+DMT+PG VPMHKV
Sbjct: 1   MASNIGMMDSAYFVGRNEILTWINNCLQLNLSRIEEAASGAVQCQMIDMTYPGAVPMHKV 60

Query: 322 N 324
           N
Sbjct: 61  N 61


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