BLASTX nr result

ID: Coptis21_contig00018785 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018785
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE00252.1| photosystem I P700 apoprotein A1, partial (chlor...    59   4e-07
gb|AFU96283.1| PsaA, partial (chloroplast) [Hypericum perforatum]      59   4e-07
ref|YP_001430108.1| photosystem I P700 chlorophyll a apoprotein ...    59   4e-07
ref|YP_007507111.1| photosystem I P700 apoprotein A1 (chloroplas...    58   9e-07
gb|AGE93456.1| photosystem I P700 apoprotein A1 [Xiphidium caeru...    58   9e-07

>dbj|BAE00252.1| photosystem I P700 apoprotein A1, partial (chloroplast)
           [Selaginella uncinata]
          Length = 749

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/30 (86%), Positives = 29/30 (96%)
 Frame = +3

Query: 381 GTQLSLFTHNMWIGGFPIVGAAAHASIFML 470
           GTQ SLFTH+MWIGGFPIVGAAAHA+IFM+
Sbjct: 382 GTQPSLFTHHMWIGGFPIVGAAAHAAIFMV 411


>gb|AFU96283.1| PsaA, partial (chloroplast) [Hypericum perforatum]
          Length = 758

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/30 (90%), Positives = 29/30 (96%)
 Frame = +3

Query: 381 GTQLSLFTHNMWIGGFPIVGAAAHASIFML 470
           GTQLSLFTH+MWIGGF IVGAAAHASIFM+
Sbjct: 390 GTQLSLFTHHMWIGGFLIVGAAAHASIFMV 419


>ref|YP_001430108.1| photosystem I P700 chlorophyll a apoprotein A1 [Cuscuta reflexa]
           gi|156556011|emb|CAM98394.1| PSI P700 apoprotein A1
           [Cuscuta reflexa]
          Length = 748

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/30 (90%), Positives = 29/30 (96%)
 Frame = +3

Query: 381 GTQLSLFTHNMWIGGFPIVGAAAHASIFML 470
           GTQLSLFTH+MWIGGF IVGAAAHA+IFML
Sbjct: 382 GTQLSLFTHHMWIGGFLIVGAAAHAAIFML 411


>ref|YP_007507111.1| photosystem I P700 apoprotein A1 (chloroplast) [Salvia
           miltiorrhiza] gi|401879742|gb|AFQ30929.1| photosystem I
           P700 apoprotein A1 (chloroplast) [Salvia miltiorrhiza]
          Length = 750

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/30 (86%), Positives = 29/30 (96%)
 Frame = +3

Query: 381 GTQLSLFTHNMWIGGFPIVGAAAHASIFML 470
           GTQLSLFTH+MWIGGF IVGAAAHA+IFM+
Sbjct: 382 GTQLSLFTHHMWIGGFLIVGAAAHAAIFMV 411


>gb|AGE93456.1| photosystem I P700 apoprotein A1 [Xiphidium caeruleum]
          Length = 750

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/30 (86%), Positives = 29/30 (96%)
 Frame = +3

Query: 381 GTQLSLFTHNMWIGGFPIVGAAAHASIFML 470
           GTQLSLFTH+MWIGGF IVGAAAHA+IFM+
Sbjct: 382 GTQLSLFTHHMWIGGFLIVGAAAHAAIFMV 411


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