BLASTX nr result
ID: Coptis21_contig00018737
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00018737
(1091 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN70922.1| hypothetical protein VITISV_016266 [Vitis vinifera] 59 3e-17
emb|CAN60595.1| hypothetical protein VITISV_015221 [Vitis vinifera] 60 1e-16
emb|CAN64256.1| hypothetical protein VITISV_040148 [Vitis vinifera] 55 5e-16
emb|CAN73982.1| hypothetical protein VITISV_007640 [Vitis vinifera] 53 2e-15
emb|CAN76604.1| hypothetical protein VITISV_012933 [Vitis vinifera] 54 2e-15
>emb|CAN70922.1| hypothetical protein VITISV_016266 [Vitis vinifera]
Length = 945
Score = 59.3 bits (142), Expect(3) = 3e-17
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 2/127 (1%)
Frame = +1
Query: 238 GSWNLLLRRFSNEWEVQQSANLVAFLD-SVILSDQSDVWCWRWTSSGVFLLSSFYCSLDE 414
G WN R N+WEV+++++ + L S ++ D D W T SG F + S Y +++
Sbjct: 713 GGWNPCFVRAFNDWEVEEASSFMERLHRSRVIEDVEDRVSWTETKSGKFSVKSLYLAIEA 772
Query: 415 PNSDITCITEKFPLKLVLKVPILHEDQAVVWSAVHGRTLTADSFIQRGTNFL-PCALCVV 591
S +FP L+ V + W A G+ LT D +RG C LC+
Sbjct: 773 GGS------ARFPSSLIWNVYVQPNISFFAWEATWGKALTLDKVQKRGWALANRCFLCLE 826
Query: 592 SNENIMH 612
+ E I H
Sbjct: 827 NEETIDH 833
Score = 43.5 bits (101), Expect(3) = 3e-17
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +3
Query: 90 FSLGNGKTIRFWVDIWVADEPL*PKFPLIYQVPILKDGTVSEFCSSEQNG 239
F +GNG+ +RFW D W D PL FP ++ + + K+ +V++ S G
Sbjct: 661 FIVGNGRRVRFWRDKWCGDSPLCSSFPSLFALTVDKEESVADVWDSLAEG 710
Score = 32.3 bits (72), Expect(3) = 3e-17
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +3
Query: 702 SLEEWLAIWPKIRGNGFGAKLWRLTPCAVIWAVWKTRN 815
S++E L W K+WR P + W VWK RN
Sbjct: 861 SIKETLLSWHGSFVGKKRKKVWRAAPLHIFWTVWKARN 898
>emb|CAN60595.1| hypothetical protein VITISV_015221 [Vitis vinifera]
Length = 849
Score = 60.5 bits (145), Expect(3) = 1e-16
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 2/127 (1%)
Frame = +1
Query: 238 GSWNLLLRRFSNEWEVQQSANLVAFLD-SVILSDQSDVWCWRWTSSGVFLLSSFYCSLDE 414
G WN R N+WEV+++++ + L S ++ D D W T SG F + S Y +++
Sbjct: 617 GGWNPCFVRAFNDWEVEEASSFMERLHHSRVIEDVEDRVSWTKTKSGKFSVKSLYLAIEA 676
Query: 415 PNSDITCITEKFPLKLVLKVPILHEDQAVVWSAVHGRTLTADSFIQRGTNFL-PCALCVV 591
S +FP L+ V + + W A G+ LT D +RG C LC+
Sbjct: 677 GGS------ARFPSSLIWNVNVQPKISFFAWEATWGKALTLDKMQKRGWALANRCFLCLE 730
Query: 592 SNENIMH 612
+ E I H
Sbjct: 731 NEETIDH 737
Score = 40.4 bits (93), Expect(3) = 1e-16
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +3
Query: 90 FSLGNGKTIRFWVDIWVADEPL*PKFPLIYQVPILKDGTVSEFCSSEQNG 239
F +GNG+ +RFW D W D PL FP ++ + K+ +V+ S G
Sbjct: 565 FIVGNGRRVRFWRDKWCGDSPLCSSFPSLFALTNDKEESVANVWDSLAEG 614
Score = 32.3 bits (72), Expect(3) = 1e-16
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 645 WSLLMQLVCDAITCIIQIVSLEEWLAIWPKIRGNGFGAKLWRLTPCAVIWAVWKTRN 815
W LL ++ ++ ++ S++E L W K+WR P + W VWK RN
Sbjct: 749 WDLLFTIL--GVSWVLPC-SVKETLLSWHGSFVGKKRKKVWRAAPLHIFWTVWKARN 802
>emb|CAN64256.1| hypothetical protein VITISV_040148 [Vitis vinifera]
Length = 2099
Score = 55.1 bits (131), Expect(3) = 5e-16
Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 5/148 (3%)
Frame = +1
Query: 196 KMVRSASFVLVNRMGSWNLLLRRFSNEWEVQQSANLVAFLDSVILSDQ-SDVWCWRWTSS 372
K + +S + R SWNL RR ++ E++ L+ LD V LS D W +SS
Sbjct: 1701 KNIPISSVLGPTRPFSWNLNFRRNLSDSEIEDLEGLMRSLDGVHLSPSVPDAXLWPLSSS 1760
Query: 373 GVFLLSSFYCSLDEPNSDITCITEKFPLKLVLKVPILHEDQAVVWSAVHGRTLTADSF-I 549
G+F + SF+ +L S + FP K V I + Q+ +W H + T D +
Sbjct: 1761 GLFSVKSFFLAL----SQFFGSPQVFPSKFVWNSQIPFKVQSFIWLVAHKKVNTNDMLQV 1816
Query: 550 QRGTNFLP---CALCVVSNENIMHSFFF 624
+R L C LC+ E+ H F +
Sbjct: 1817 RRPYKALSPDICILCMKHGESADHIFLY 1844
Score = 45.8 bits (107), Expect(3) = 5e-16
Identities = 20/66 (30%), Positives = 38/66 (57%)
Frame = +3
Query: 15 LICYSHAAVFGKVYQFCRSSEMAFSFSLGNGKTIRFWVDIWVADEPL*PKFPLIYQVPIL 194
++ +SH + + Q + F +GNG+ IRFW D+W D+PL ++P +++V +
Sbjct: 1641 IVRWSHRCPWKAISQVFQEFSSFTRFVVGNGERIRFWEDLWWGDQPLGSQYPSLFRVVLD 1700
Query: 195 KDGTVS 212
K+ +S
Sbjct: 1701 KNIPIS 1706
Score = 30.0 bits (66), Expect(3) = 5e-16
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Frame = +3
Query: 735 IRGNGFGAK-----LWRLTPCAVIWAVWKTRN*RFSETREYKPKQ*AWE*KLFCDMVLRY 899
I+ NGFG+ LW+ A+I VW+ RN R E + + + W+ +F + Y
Sbjct: 1875 IKFNGFGSSKRGIALWQAANIALIQIVWRERNARIFEDKA-RNSESLWDSIVFLASLWAY 1933
Query: 900 TGKAYVNRL 926
K + L
Sbjct: 1934 CSKQLIVNL 1942
>emb|CAN73982.1| hypothetical protein VITISV_007640 [Vitis vinifera]
Length = 1927
Score = 53.1 bits (126), Expect(3) = 2e-15
Identities = 44/146 (30%), Positives = 66/146 (45%), Gaps = 5/146 (3%)
Frame = +1
Query: 196 KMVRSASFVLVNRMGSWNLLLRRFSNEWEVQQSANLVAFLDSVILSDQS-DVWCWRWTSS 372
K + +S + R SWNL RR ++ E++ L+ LD V LS D W +SS
Sbjct: 1672 KNIPISSVLGPTRPFSWNLNFRRNLSDSEIEDLEGLMRSLDGVHLSPSXPDARLWPLSSS 1731
Query: 373 GVFLLSSFYCSLDEPNSDITCITEKFPLKLVLKVPILHEDQAVVWSAVHGRTLTADSF-I 549
G+F + SF+ +L S + FP K V I + Q+ +W H + T D +
Sbjct: 1732 GLFSVKSFFLAL----SQFFGSPQVFPSKFVWNSQIPFKVQSFIWLVAHKKVNTNDMLQV 1787
Query: 550 QRGTNFLP---CALCVVSNENIMHSF 618
+R L C LC+ E+ H F
Sbjct: 1788 RRPYKALSPDICILCMKHGESADHIF 1813
Score = 45.8 bits (107), Expect(3) = 2e-15
Identities = 20/66 (30%), Positives = 38/66 (57%)
Frame = +3
Query: 15 LICYSHAAVFGKVYQFCRSSEMAFSFSLGNGKTIRFWVDIWVADEPL*PKFPLIYQVPIL 194
++ +SH + + Q + F +GNG+ IRFW D+W D+PL ++P +++V +
Sbjct: 1612 IVRWSHRCPWKAISQVFQEFSSFTRFVVGNGEXIRFWEDLWWGDQPLGSQYPSLFRVVLD 1671
Query: 195 KDGTVS 212
K+ +S
Sbjct: 1672 KNIPIS 1677
Score = 30.0 bits (66), Expect(3) = 2e-15
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Frame = +3
Query: 735 IRGNGFGAK-----LWRLTPCAVIWAVWKTRN*RFSETREYKPKQ*AWE*KLFCDMVLRY 899
I+ NGFG+ LW+ A+I VW+ RN R E + + + W+ +F + Y
Sbjct: 1846 IKFNGFGSSKRGIALWQAANIALIRIVWRERNARIFEDKA-RNSESLWDSIVFLASLWAY 1904
Query: 900 TGKAY 914
K +
Sbjct: 1905 CSKVF 1909
>emb|CAN76604.1| hypothetical protein VITISV_012933 [Vitis vinifera]
Length = 1863
Score = 53.5 bits (127), Expect(3) = 2e-15
Identities = 44/146 (30%), Positives = 66/146 (45%), Gaps = 5/146 (3%)
Frame = +1
Query: 196 KMVRSASFVLVNRMGSWNLLLRRFSNEWEVQQSANLVAFLDSVILSDQ-SDVWCWRWTSS 372
K + +S + R SWNL RR ++ E++ L+ LD V LS D W +SS
Sbjct: 1608 KNIPISSVLGPTRPFSWNLNFRRNLSDSEIEDLEGLMRSLDGVHLSPSVPDARLWPLSSS 1667
Query: 373 GVFLLSSFYCSLDEPNSDITCITEKFPLKLVLKVPILHEDQAVVWSAVHGRTLTADSF-I 549
G+F + SF+ +L S + FP K V I + Q+ +W H + T D +
Sbjct: 1668 GLFSIKSFFLAL----SQFFGSPQVFPSKFVWNSQIPFKVQSFIWLVAHKKVNTNDMLQV 1723
Query: 550 QRGTNFLP---CALCVVSNENIMHSF 618
+R L C LC+ E+ H F
Sbjct: 1724 RRPYKALSPDICILCMKHGESADHIF 1749
Score = 43.9 bits (102), Expect(3) = 2e-15
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = +3
Query: 27 SHAAVFGKVYQFCRSSEMAFSFSLGNGKTIRFWVDIWVADEPL*PKFPLIYQVPILKDGT 206
SH + + Q + F +GNG+ IRFW D+W D+PL ++P +++V + K+
Sbjct: 1552 SHRCPWKAISQVFQEFSSFTRFVVGNGERIRFWEDLWWEDQPLGSQYPSLFRVVLDKNIP 1611
Query: 207 VS 212
+S
Sbjct: 1612 IS 1613
Score = 31.6 bits (70), Expect(3) = 2e-15
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Frame = +3
Query: 735 IRGNGFGAK-----LWRLTPCAVIWAVWKTRN*RFSETREYKPKQ*AWE*KLFCDMVLRY 899
I+ NGFG+ LW+ T A+I VW+ RN R E + + + W+ +F + Y
Sbjct: 1782 IKFNGFGSTKRGIALWQATNIALIRIVWRERNARIFEDKA-RNSESLWDSIVFLASLWAY 1840
Query: 900 TGKAY 914
K +
Sbjct: 1841 CSKVF 1845