BLASTX nr result

ID: Coptis21_contig00018729 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018729
         (810 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315903.1| predicted protein [Populus trichocarpa] gi|2...   201   1e-49
ref|XP_002532228.1| TRANSPARENT TESTA 12 protein, putative [Rici...   201   2e-49
ref|XP_003534150.1| PREDICTED: MATE efflux family protein DTX1-l...   198   1e-48
gb|EAZ02302.1| hypothetical protein OsI_24403 [Oryza sativa Indi...   198   1e-48
ref|XP_003634196.1| PREDICTED: MATE efflux family protein 6 [Vit...   197   2e-48

>ref|XP_002315903.1| predicted protein [Populus trichocarpa] gi|222864943|gb|EEF02074.1|
           predicted protein [Populus trichocarpa]
          Length = 481

 Score =  201 bits (512), Expect = 1e-49
 Identities = 96/149 (64%), Positives = 116/149 (77%)
 Frame = +1

Query: 1   STRVSNELGSGKPRNARFAIHAMVVLSXXXXXXXXXXXXLVRKLWGKLYSNEEEVIRYVA 180
           STRVSNELG+G+P+ AR AI  M++++            LVR++WG LYSNEEEVI YVA
Sbjct: 326 STRVSNELGAGRPQGARLAICVMIIIALSEGAAVGITTILVRQVWGNLYSNEEEVITYVA 385

Query: 181 TMLPLLALSNFMDGLQCVLSGAARGCGWQNICSLINLVAYYGVGIPSAVLFAFLFKIGGK 360
            M+PLLALS+F+DG QCVLSGAARGCGWQN+C+ INL AYY V IPSAVL AF+F IGG 
Sbjct: 386 NMMPLLALSDFLDGFQCVLSGAARGCGWQNLCAFINLGAYYVVAIPSAVLLAFIFHIGGM 445

Query: 361 GLWMGIICALFVQLLMLVTIILRTDWDKE 447
           GLWMGIIC L VQ++ LV++   TDWD+E
Sbjct: 446 GLWMGIICGLVVQVVALVSVNACTDWDRE 474


>ref|XP_002532228.1| TRANSPARENT TESTA 12 protein, putative [Ricinus communis]
           gi|223528085|gb|EEF30159.1| TRANSPARENT TESTA 12
           protein, putative [Ricinus communis]
          Length = 485

 Score =  201 bits (511), Expect = 2e-49
 Identities = 96/157 (61%), Positives = 121/157 (77%)
 Frame = +1

Query: 1   STRVSNELGSGKPRNARFAIHAMVVLSXXXXXXXXXXXXLVRKLWGKLYSNEEEVIRYVA 180
           STRVSNELG+G+P  A+ A+  M++++            L+R++WGKLYSNEEEVI+YVA
Sbjct: 322 STRVSNELGAGRPEGAQLALCVMIIMALSEGLVVGIVTVLLRQVWGKLYSNEEEVIKYVA 381

Query: 181 TMLPLLALSNFMDGLQCVLSGAARGCGWQNICSLINLVAYYGVGIPSAVLFAFLFKIGGK 360
            +LPLLALS+F+DG QCVLSGAARGCGWQ +C+ INL AYY V IP A+LFAF+F IGG 
Sbjct: 382 NILPLLALSDFLDGFQCVLSGAARGCGWQTLCACINLGAYYVVAIPCALLFAFVFHIGGM 441

Query: 361 GLWMGIICALFVQLLMLVTIILRTDWDKEARKTMDGV 471
           GLWMGIIC L VQ++ LVTI   T+WD+EA K ++ V
Sbjct: 442 GLWMGIICGLLVQIVALVTINACTNWDQEAAKAINRV 478


>ref|XP_003534150.1| PREDICTED: MATE efflux family protein DTX1-like [Glycine max]
          Length = 489

 Score =  198 bits (504), Expect = 1e-48
 Identities = 94/157 (59%), Positives = 117/157 (74%)
 Frame = +1

Query: 1   STRVSNELGSGKPRNARFAIHAMVVLSXXXXXXXXXXXXLVRKLWGKLYSNEEEVIRYVA 180
           S RVSNELG+G+P NAR A+  ++VL+            LVR +WG  YSNE EV+ YVA
Sbjct: 322 SIRVSNELGAGRPWNARLAVRVVLVLAIIEGIIVGTVMILVRNIWGYAYSNEVEVVEYVA 381

Query: 181 TMLPLLALSNFMDGLQCVLSGAARGCGWQNICSLINLVAYYGVGIPSAVLFAFLFKIGGK 360
           TM P+LA SNF+DGLQCVLSG ARGCGWQ I + +NL +YY VGIPS+++FAF+  IGGK
Sbjct: 382 TMFPILAASNFLDGLQCVLSGTARGCGWQKIGAFVNLGSYYIVGIPSSIVFAFVLHIGGK 441

Query: 361 GLWMGIICALFVQLLMLVTIILRTDWDKEARKTMDGV 471
           GLW+GIICAL VQ+  L+ I +RTDWD+EA+K  D V
Sbjct: 442 GLWLGIICALIVQMCSLMIITIRTDWDQEAKKATDRV 478


>gb|EAZ02302.1| hypothetical protein OsI_24403 [Oryza sativa Indica Group]
          Length = 483

 Score =  198 bits (503), Expect = 1e-48
 Identities = 92/152 (60%), Positives = 116/152 (76%)
 Frame = +1

Query: 1   STRVSNELGSGKPRNARFAIHAMVVLSXXXXXXXXXXXXLVRKLWGKLYSNEEEVIRYVA 180
           S RVSNELG+  P+ AR ++    ++             LVR +WG LYSNEEEV++YVA
Sbjct: 317 SIRVSNELGARNPQAARLSVFVSGIMCLTEGILVAIITVLVRDIWGYLYSNEEEVVKYVA 376

Query: 181 TMLPLLALSNFMDGLQCVLSGAARGCGWQNICSLINLVAYYGVGIPSAVLFAFLFKIGGK 360
            M+P+LALS+FMDG+QC LSGAARGCGWQ +CS+INL AYY +GIPSAV FAF+ KIGGK
Sbjct: 377 AMMPILALSDFMDGIQCTLSGAARGCGWQKVCSVINLCAYYTIGIPSAVTFAFVLKIGGK 436

Query: 361 GLWMGIICALFVQLLMLVTIILRTDWDKEARK 456
           GLW+GIICA+ VQ+L LV ++LRT W++EA K
Sbjct: 437 GLWLGIICAMTVQILALVVMLLRTSWNEEAEK 468


>ref|XP_003634196.1| PREDICTED: MATE efflux family protein 6 [Vitis vinifera]
          Length = 399

 Score =  197 bits (502), Expect = 2e-48
 Identities = 93/167 (55%), Positives = 123/167 (73%)
 Frame = +1

Query: 1   STRVSNELGSGKPRNARFAIHAMVVLSXXXXXXXXXXXXLVRKLWGKLYSNEEEVIRYVA 180
           STRVSNELG+G P+ AR A+  ++V++            L+R +WG  YSNE EV++YVA
Sbjct: 230 STRVSNELGAGHPQAARLAVFVVLVMAIAEGTLLGLLLILIRNIWGYAYSNEIEVVKYVA 289

Query: 181 TMLPLLALSNFMDGLQCVLSGAARGCGWQNICSLINLVAYYGVGIPSAVLFAFLFKIGGK 360
            M+P++ALSNF+DG+QCVLSG ARGCGWQ I + +NL +YY VGIP A+L AF+F IGG+
Sbjct: 290 AMMPIVALSNFLDGMQCVLSGTARGCGWQKIGAFVNLGSYYLVGIPCAILLAFVFHIGGR 349

Query: 361 GLWMGIICALFVQLLMLVTIILRTDWDKEARKTMDGVKTFIITSDTG 501
           GLW+GIICAL VQ+L L+ + LRT+W+ EA+K  D V   II  +TG
Sbjct: 350 GLWLGIICALIVQVLSLLIVTLRTNWEDEAKKATDRVYDAIIPIETG 396


Top