BLASTX nr result

ID: Coptis21_contig00018708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018708
         (625 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273746.1| PREDICTED: uncharacterized protein LOC100259...   221   6e-56
emb|CAN83784.1| hypothetical protein VITISV_008227 [Vitis vinifera]   221   6e-56
ref|XP_002312016.1| predicted protein [Populus trichocarpa] gi|2...   217   2e-54
ref|XP_002315304.1| predicted protein [Populus trichocarpa] gi|2...   216   2e-54
ref|XP_004158592.1| PREDICTED: uncharacterized protein LOC101230...   213   3e-53

>ref|XP_002273746.1| PREDICTED: uncharacterized protein LOC100259928 [Vitis vinifera]
           gi|296086014|emb|CBI31455.3| unnamed protein product
           [Vitis vinifera]
          Length = 270

 Score =  221 bits (564), Expect = 6e-56
 Identities = 104/129 (80%), Positives = 118/129 (91%)
 Frame = +1

Query: 4   DGNFGWSKGYVAGILTVDTVADFLPRKGPLRQRRTGIAYVSNVAVRERDRCKGIAKRLMT 183
           DG F ++KGYVAGILTVDTVADFLPRKGPLRQRR+GIAY+SNVAVRE  R KGIAKRL+ 
Sbjct: 142 DGKFSFNKGYVAGILTVDTVADFLPRKGPLRQRRSGIAYISNVAVRETFRRKGIAKRLIV 201

Query: 184 KAEAQARSWGCRAIALHCDMNNPAASRLYKGQGFKSIKVPERANWPQPKTSPNVQFSFMM 363
           KAEAQARSWGCRA+ALHCD+NNP A++LYKGQGFK IKVPE ANWPQPKTSP++QF FMM
Sbjct: 202 KAEAQARSWGCRAVALHCDLNNPGATKLYKGQGFKCIKVPEGANWPQPKTSPDIQFGFMM 261

Query: 364 KLLNTRTSS 390
           KLLNT +++
Sbjct: 262 KLLNTSSAA 270


>emb|CAN83784.1| hypothetical protein VITISV_008227 [Vitis vinifera]
          Length = 222

 Score =  221 bits (564), Expect = 6e-56
 Identities = 104/129 (80%), Positives = 118/129 (91%)
 Frame = +1

Query: 4   DGNFGWSKGYVAGILTVDTVADFLPRKGPLRQRRTGIAYVSNVAVRERDRCKGIAKRLMT 183
           DG F ++KGYVAGILTVDTVADFLPRKGPLRQRR+GIAY+SNVAVRE  R KGIAKRL+ 
Sbjct: 94  DGKFSFNKGYVAGILTVDTVADFLPRKGPLRQRRSGIAYISNVAVRETFRRKGIAKRLIV 153

Query: 184 KAEAQARSWGCRAIALHCDMNNPAASRLYKGQGFKSIKVPERANWPQPKTSPNVQFSFMM 363
           KAEAQARSWGCRA+ALHCD+NNP A++LYKGQGFK IKVPE ANWPQPKTSP++QF FMM
Sbjct: 154 KAEAQARSWGCRAVALHCDLNNPGATKLYKGQGFKCIKVPEGANWPQPKTSPDIQFGFMM 213

Query: 364 KLLNTRTSS 390
           KLLNT +++
Sbjct: 214 KLLNTSSAA 222


>ref|XP_002312016.1| predicted protein [Populus trichocarpa] gi|222851836|gb|EEE89383.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score =  217 bits (552), Expect = 2e-54
 Identities = 102/125 (81%), Positives = 115/125 (92%)
 Frame = +1

Query: 4   DGNFGWSKGYVAGILTVDTVADFLPRKGPLRQRRTGIAYVSNVAVRERDRCKGIAKRLMT 183
           DG F  ++GYV GILTVDTVADFLPRKGPLRQRRTGIAY+SNVAVRER R KGIAKRL+ 
Sbjct: 158 DGKFSLNRGYVTGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVRERFRRKGIAKRLIA 217

Query: 184 KAEAQARSWGCRAIALHCDMNNPAASRLYKGQGFKSIKVPERANWPQPKTSPNVQFSFMM 363
           KAEAQARSWGCR+IALHCD+NNP A++LYKGQGFK IKVPE A+WPQPKTSP+++F+FMM
Sbjct: 218 KAEAQARSWGCRSIALHCDLNNPGATKLYKGQGFKCIKVPEGASWPQPKTSPDIKFNFMM 277

Query: 364 KLLNT 378
           KLLNT
Sbjct: 278 KLLNT 282


>ref|XP_002315304.1| predicted protein [Populus trichocarpa] gi|222864344|gb|EEF01475.1|
           predicted protein [Populus trichocarpa]
          Length = 274

 Score =  216 bits (551), Expect = 2e-54
 Identities = 101/125 (80%), Positives = 115/125 (92%)
 Frame = +1

Query: 4   DGNFGWSKGYVAGILTVDTVADFLPRKGPLRQRRTGIAYVSNVAVRERDRCKGIAKRLMT 183
           DGNF  ++GY+AGILTVDTVA+FLPRKGPLRQRRTGIAY+SNVAVRER R KGI KRL+ 
Sbjct: 146 DGNFSLNRGYIAGILTVDTVANFLPRKGPLRQRRTGIAYISNVAVRERFRQKGIGKRLVA 205

Query: 184 KAEAQARSWGCRAIALHCDMNNPAASRLYKGQGFKSIKVPERANWPQPKTSPNVQFSFMM 363
           KAEAQAR+WGCR+IALHCD NNP A++LYKGQGFKSIKVPE ANWP PKTSP+++F+FMM
Sbjct: 206 KAEAQARNWGCRSIALHCDSNNPGATKLYKGQGFKSIKVPEGANWPHPKTSPDIKFNFMM 265

Query: 364 KLLNT 378
           KLLNT
Sbjct: 266 KLLNT 270


>ref|XP_004158592.1| PREDICTED: uncharacterized protein LOC101230411 [Cucumis sativus]
          Length = 291

 Score =  213 bits (541), Expect = 3e-53
 Identities = 101/128 (78%), Positives = 114/128 (89%)
 Frame = +1

Query: 4   DGNFGWSKGYVAGILTVDTVADFLPRKGPLRQRRTGIAYVSNVAVRERDRCKGIAKRLMT 183
           DG    +KGYVAGILTVDTVADFLPRKGP+RQRRTGIAY+SNVAVRER R KGIAK+L+ 
Sbjct: 163 DGKVSLNKGYVAGILTVDTVADFLPRKGPMRQRRTGIAYISNVAVRERFRRKGIAKKLIL 222

Query: 184 KAEAQARSWGCRAIALHCDMNNPAASRLYKGQGFKSIKVPERANWPQPKTSPNVQFSFMM 363
           KAEA+AR+WGCRAIALHCD NNP A++LYKGQGFKSIKVPE ANWPQPKTSP++++SFMM
Sbjct: 223 KAEAEARNWGCRAIALHCDTNNPGATKLYKGQGFKSIKVPEGANWPQPKTSPDIKYSFMM 282

Query: 364 KLLNTRTS 387
           KLL    S
Sbjct: 283 KLLKNPAS 290


Top