BLASTX nr result

ID: Coptis21_contig00018706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018706
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299528.1| predicted protein [Populus trichocarpa] gi|2...    99   1e-29
gb|AEW69821.1| Hop-interacting protein THI138 [Solanum lycopersi...   100   1e-29
ref|NP_176555.4| Mur-ligase, Mur-ligase-C and Mur-ligase-M domai...   101   5e-29
gb|AAG52413.1|AC011622_1 putative UDP-N-acetylmuramoylalanyl-D-g...   101   5e-29
ref|XP_002887945.1| PDE316 [Arabidopsis lyrata subsp. lyrata] gi...   101   5e-29

>ref|XP_002299528.1| predicted protein [Populus trichocarpa] gi|222846786|gb|EEE84333.1|
           predicted protein [Populus trichocarpa]
          Length = 777

 Score = 98.6 bits (244), Expect(2) = 1e-29
 Identities = 50/69 (72%), Positives = 54/69 (78%)
 Frame = -2

Query: 306 ELSLFETQVLVNTPQGILEISSGLLGRHNTYNXXXXXXXXXXXXAPLEGIVRGIEEVDSV 127
           ELSLFETQVLVNTP GILEISSGLLG+HN YN            APLE IVRGIEE+D+V
Sbjct: 523 ELSLFETQVLVNTPHGILEISSGLLGKHNIYNILAAVAVGIAVGAPLEDIVRGIEEIDAV 582

Query: 126 PGRCQLIDE 100
           PGRC+LIDE
Sbjct: 583 PGRCELIDE 591



 Score = 56.2 bits (134), Expect(2) = 1e-29
 Identities = 29/37 (78%), Positives = 31/37 (83%)
 Frame = -1

Query: 112 IDR*RTFVVIVDYAHTLDALSRLLDSVRELSPRRIIT 2
           ID  + F VIVDYAHT DALSRLLDSVREL P+RIIT
Sbjct: 589 IDEEQAFGVIVDYAHTPDALSRLLDSVRELRPKRIIT 625


>gb|AEW69821.1| Hop-interacting protein THI138 [Solanum lycopersicum]
          Length = 771

 Score = 99.8 bits (247), Expect(2) = 1e-29
 Identities = 51/69 (73%), Positives = 55/69 (79%)
 Frame = -2

Query: 306 ELSLFETQVLVNTPQGILEISSGLLGRHNTYNXXXXXXXXXXXXAPLEGIVRGIEEVDSV 127
           +LSLFETQVLVNTPQGILEISSGLLGRHN YN            APLE IV+GIEEVD+V
Sbjct: 517 QLSLFETQVLVNTPQGILEISSGLLGRHNIYNILAAVAVGIAVGAPLEDIVKGIEEVDAV 576

Query: 126 PGRCQLIDE 100
           PGRC+LIDE
Sbjct: 577 PGRCELIDE 585



 Score = 55.1 bits (131), Expect(2) = 1e-29
 Identities = 28/37 (75%), Positives = 30/37 (81%)
 Frame = -1

Query: 112 IDR*RTFVVIVDYAHTLDALSRLLDSVRELSPRRIIT 2
           ID  + F VIVDYAHT DALSRLLD VREL PRR+IT
Sbjct: 583 IDEEQAFGVIVDYAHTPDALSRLLDYVRELGPRRVIT 619


>ref|NP_176555.4| Mur-ligase, Mur-ligase-C and Mur-ligase-M domain-containing protein
           [Arabidopsis thaliana] gi|332196011|gb|AEE34132.1|
           Mur-ligase, Mur-ligase-C and Mur-ligase-M
           domain-containing protein [Arabidopsis thaliana]
          Length = 772

 Score =  101 bits (252), Expect(2) = 5e-29
 Identities = 52/69 (75%), Positives = 55/69 (79%)
 Frame = -2

Query: 306 ELSLFETQVLVNTPQGILEISSGLLGRHNTYNXXXXXXXXXXXXAPLEGIVRGIEEVDSV 127
           ELSLFETQVLVNTPQGILEISSGLLGRHN YN            APLE IVRG+EEVD+V
Sbjct: 518 ELSLFETQVLVNTPQGILEISSGLLGRHNIYNILAAVAVGIAVGAPLEDIVRGVEEVDAV 577

Query: 126 PGRCQLIDE 100
           PGRC+LIDE
Sbjct: 578 PGRCELIDE 586



 Score = 51.2 bits (121), Expect(2) = 5e-29
 Identities = 26/37 (70%), Positives = 30/37 (81%)
 Frame = -1

Query: 112 IDR*RTFVVIVDYAHTLDALSRLLDSVRELSPRRIIT 2
           ID  + F VIVD+A+T D LSRLLDS+REL PRRIIT
Sbjct: 584 IDEEQAFGVIVDHANTPDGLSRLLDSIRELKPRRIIT 620


>gb|AAG52413.1|AC011622_1 putative UDP-N-acetylmuramoylalanyl-D-glutamate--2,
           6-diaminopimelate ligase; 54319-51679 [Arabidopsis
           thaliana]
          Length = 767

 Score =  101 bits (252), Expect(2) = 5e-29
 Identities = 52/69 (75%), Positives = 55/69 (79%)
 Frame = -2

Query: 306 ELSLFETQVLVNTPQGILEISSGLLGRHNTYNXXXXXXXXXXXXAPLEGIVRGIEEVDSV 127
           ELSLFETQVLVNTPQGILEISSGLLGRHN YN            APLE IVRG+EEVD+V
Sbjct: 518 ELSLFETQVLVNTPQGILEISSGLLGRHNIYNILAAVAVGIAVGAPLEDIVRGVEEVDAV 577

Query: 126 PGRCQLIDE 100
           PGRC+LIDE
Sbjct: 578 PGRCELIDE 586



 Score = 51.2 bits (121), Expect(2) = 5e-29
 Identities = 26/37 (70%), Positives = 30/37 (81%)
 Frame = -1

Query: 112 IDR*RTFVVIVDYAHTLDALSRLLDSVRELSPRRIIT 2
           ID  + F VIVD+A+T D LSRLLDS+REL PRRIIT
Sbjct: 584 IDEEQAFGVIVDHANTPDGLSRLLDSIRELKPRRIIT 620


>ref|XP_002887945.1| PDE316 [Arabidopsis lyrata subsp. lyrata]
           gi|297333786|gb|EFH64204.1| PDE316 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 767

 Score =  101 bits (252), Expect(2) = 5e-29
 Identities = 52/69 (75%), Positives = 55/69 (79%)
 Frame = -2

Query: 306 ELSLFETQVLVNTPQGILEISSGLLGRHNTYNXXXXXXXXXXXXAPLEGIVRGIEEVDSV 127
           ELSLFETQVLVNTPQGILEISSGLLGRHN YN            APLE IVRG+EEVD+V
Sbjct: 518 ELSLFETQVLVNTPQGILEISSGLLGRHNIYNILAAVAVGIAVGAPLEDIVRGVEEVDAV 577

Query: 126 PGRCQLIDE 100
           PGRC+LIDE
Sbjct: 578 PGRCELIDE 586



 Score = 51.2 bits (121), Expect(2) = 5e-29
 Identities = 26/37 (70%), Positives = 30/37 (81%)
 Frame = -1

Query: 112 IDR*RTFVVIVDYAHTLDALSRLLDSVRELSPRRIIT 2
           ID  + F VIVD+A+T D LSRLLDS+REL PRRIIT
Sbjct: 584 IDEEQAFGVIVDHANTPDGLSRLLDSIRELKPRRIIT 620


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