BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018697
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303374.1| predicted protein [Populus trichocarpa] gi|2...   177   6e-43
ref|NP_680717.2| tetratricopeptide repeat domain-containing prot...   170   1e-40
emb|CAA06832.1| DYW10 protein [Arabidopsis thaliana]                  169   2e-40
ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containi...   168   4e-40
ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containi...   168   4e-40

>ref|XP_002303374.1| predicted protein [Populus trichocarpa] gi|222840806|gb|EEE78353.1|
           predicted protein [Populus trichocarpa]
          Length = 569

 Score =  177 bits (450), Expect = 6e-43
 Identities = 81/102 (79%), Positives = 91/102 (89%)
 Frame = +2

Query: 2   ELEKSMKLAGYKPDLDFALHDVGEEQKEMLVMRHSEKLAVAFGLISSPPGTRIRVFKNLR 181
           ELEK MKLAGY PDL+FALHDVGEEQKE L++ HSEKLA+A+GLI  PPGT IRVFKNLR
Sbjct: 468 ELEKKMKLAGYVPDLEFALHDVGEEQKEQLLLWHSEKLAIAYGLIKLPPGTPIRVFKNLR 527

Query: 182 ICGDCHNAIKCISDIKRREIIVRDTTRFHHFRNGNCSCGDYW 307
           +CGDCH AIK IS I+RREIIVRDTTRFHHF++G+CSC DYW
Sbjct: 528 VCGDCHRAIKYISQIERREIIVRDTTRFHHFKDGHCSCADYW 569


>ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
           thaliana] gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g16835, mitochondrial; AltName: Full=Protein DYW10;
           Flags: Precursor gi|332658412|gb|AEE83812.1|
           tetratricopeptide repeat domain-containing protein
           [Arabidopsis thaliana]
          Length = 656

 Score =  170 bits (431), Expect = 1e-40
 Identities = 78/102 (76%), Positives = 92/102 (90%)
 Frame = +2

Query: 2   ELEKSMKLAGYKPDLDFALHDVGEEQKEMLVMRHSEKLAVAFGLISSPPGTRIRVFKNLR 181
           ELEK MKLAGYKP+L+FALH+V EEQKE L++ HSEKLAVAFG I  P G++I+VFKNLR
Sbjct: 555 ELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLR 614

Query: 182 ICGDCHNAIKCISDIKRREIIVRDTTRFHHFRNGNCSCGDYW 307
           ICGDCH AIK IS+I++REIIVRDTTRFHHF++G+CSCGDYW
Sbjct: 615 ICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656


>emb|CAA06832.1| DYW10 protein [Arabidopsis thaliana]
          Length = 105

 Score =  169 bits (428), Expect = 2e-40
 Identities = 78/102 (76%), Positives = 91/102 (89%)
 Frame = +2

Query: 2   ELEKSMKLAGYKPDLDFALHDVGEEQKEMLVMRHSEKLAVAFGLISSPPGTRIRVFKNLR 181
           ELEK MKLAGYKP+L+FALH+V EEQKE L++ HSEKLAVAFG I  P G+ I+VFKNLR
Sbjct: 4   ELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPEGSPIQVFKNLR 63

Query: 182 ICGDCHNAIKCISDIKRREIIVRDTTRFHHFRNGNCSCGDYW 307
           ICGDCH AIK IS+I++REIIVRDTTRFHHF++G+CSCGDYW
Sbjct: 64  ICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 105


>ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score =  168 bits (426), Expect = 4e-40
 Identities = 78/102 (76%), Positives = 88/102 (86%)
 Frame = +2

Query: 2   ELEKSMKLAGYKPDLDFALHDVGEEQKEMLVMRHSEKLAVAFGLISSPPGTRIRVFKNLR 181
           EL+  MKLAGY PDL+FALHDV EE KE L++ HSEKLA+AFGL+ + PGT IRVFKNLR
Sbjct: 566 ELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPIRVFKNLR 625

Query: 182 ICGDCHNAIKCISDIKRREIIVRDTTRFHHFRNGNCSCGDYW 307
           +CGDCH AIK IS I++REIIVRDTTRFHHFRNG CSCGDYW
Sbjct: 626 VCGDCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667


>ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score =  168 bits (426), Expect = 4e-40
 Identities = 78/102 (76%), Positives = 88/102 (86%)
 Frame = +2

Query: 2   ELEKSMKLAGYKPDLDFALHDVGEEQKEMLVMRHSEKLAVAFGLISSPPGTRIRVFKNLR 181
           EL+  MKLAGY PDL+FALHDV EE KE L++ HSEKLA+AFGL+ + PGT IRVFKNLR
Sbjct: 566 ELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPIRVFKNLR 625

Query: 182 ICGDCHNAIKCISDIKRREIIVRDTTRFHHFRNGNCSCGDYW 307
           +CGDCH AIK IS I++REIIVRDTTRFHHFRNG CSCGDYW
Sbjct: 626 VCGDCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667