BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018673
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31113.3| unnamed protein product [Vitis vinifera]               95   5e-18
ref|YP_006460166.1| hypothetical protein A565_p03 (mitochondrion...    72   4e-11
emb|CBJ20728.1| hypothetical protein [Beta vulgaris subsp. marit...    66   3e-09
ref|YP_006291808.1| atp1 gene product (mitochondrion) [Daucus ca...    64   1e-08
ref|YP_004927815.1| cox2-2 (mitochondrion) [Brassica rapa subsp....    61   1e-07

>emb|CBI31113.3| unnamed protein product [Vitis vinifera]
          Length = 405

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 48/78 (61%), Positives = 61/78 (78%), Gaps = 3/78 (3%)
 Frame = -1

Query: 225 IAPPG---DEAGPSHQGSVVQNKNASLESSMRNRIVRLDQENGPYLLDKAKGEYWANIKQ 55
           + PP    DEAGPSHQ S+V  KN+SL+SS++NRI+RL+++  P+LLDK KGEYW NI+ 
Sbjct: 128 VNPPSVARDEAGPSHQPSIV--KNSSLKSSIKNRILRLERDQTPFLLDKEKGEYWNNIQT 185

Query: 54  ELDHASSLREYNRLLEFE 1
            LD A S +EYNRLLEFE
Sbjct: 186 ALDQAPSQKEYNRLLEFE 203


>ref|YP_006460166.1| hypothetical protein A565_p03 (mitochondrion) [Mimulus guttatus]
           gi|340007680|gb|AEK26544.1| hypothetical protein
           (mitochondrion) [Mimulus guttatus]
          Length = 290

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 42/71 (59%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
 Frame = -1

Query: 210 DEAGPSHQGSVVQNKNASLESSMRNRIVRLDQ-ENGPYLLDKAKGEYWANIKQELDHASS 34
           DEAGPS QGSVV  +NASLESSMRNRI++L++  N  +LL K +G Y  ++  EL  A+S
Sbjct: 127 DEAGPSGQGSVV--RNASLESSMRNRILQLERVPNQTFLLGKPRGTYVQDLLGELRKATS 184

Query: 33  LREYNRLLEFE 1
             EYNRLL+FE
Sbjct: 185 QAEYNRLLDFE 195


>emb|CBJ20728.1| hypothetical protein [Beta vulgaris subsp. maritima]
          Length = 360

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
 Frame = -1

Query: 210 DEAGPSHQGSVVQ-NKNASLESSMRNRIVRLDQENGPYLLDKAKGEYWANIKQELDHASS 34
           DE GPSHQ   +   KN SLE+S++ R+  L++   P+L  + +G+YW ++K++L  A  
Sbjct: 198 DEGGPSHQDPGIPFTKNLSLEASLKGRVEALEKTKSPFLPQEEQGQYWKSLKKDLYEAPD 257

Query: 33  LREYNRLLEFE 1
             EYNR LEFE
Sbjct: 258 QSEYNRKLEFE 268


>ref|YP_006291808.1| atp1 gene product (mitochondrion) [Daucus carota subsp. sativus]
           gi|374081940|gb|AEY81132.1| ATP synthase F1 subunit 1
           (mitochondrion) [Daucus carota subsp. sativus]
          Length = 755

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/56 (53%), Positives = 41/56 (73%)
 Frame = -1

Query: 168 KNASLESSMRNRIVRLDQENGPYLLDKAKGEYWANIKQELDHASSLREYNRLLEFE 1
           +N+ LE+S+ NRI+RLD  + PYLLD+   + WA++K ELD A S REY R L+FE
Sbjct: 608 RNSGLEASIHNRILRLDNLDSPYLLDRKGVDSWADVKAELDGADSQREYYRRLDFE 663


>ref|YP_004927815.1| cox2-2 (mitochondrion) [Brassica rapa subsp. campestris]
           gi|353531333|ref|YP_004927718.1| cox2-2 (mitochondrion)
           [Brassica juncea] gi|335355066|gb|AEH43619.1| cox2-2
           [Brassica juncea] gi|335954429|gb|AEH76228.1| cox2-2
           [Brassica rapa subsp. campestris]
           gi|339511261|emb|CBX48316.1| cox2-2 [Brassica napus]
          Length = 440

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/52 (59%), Positives = 38/52 (73%)
 Frame = -1

Query: 156 LESSMRNRIVRLDQENGPYLLDKAKGEYWANIKQELDHASSLREYNRLLEFE 1
           LESS+ NRI  L+  N P+LL KAKGEYWA IK+ L ++S  REY R L+FE
Sbjct: 297 LESSIVNRIRVLEAANSPFLLGKAKGEYWAEIKESLRNSSYQREYYRGLDFE 348