BLASTX nr result

ID: Coptis21_contig00018644 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018644
         (745 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519872.1| conserved hypothetical protein [Ricinus comm...   157   3e-36
ref|XP_002326584.1| predicted protein [Populus trichocarpa] gi|2...   155   6e-36
ref|XP_002266174.1| PREDICTED: protein PAM68, chloroplastic [Vit...   155   6e-36
emb|CBI24589.3| unnamed protein product [Vitis vinifera]              150   3e-34
ref|XP_003612620.1| hypothetical protein MTR_5g027010 [Medicago ...   148   1e-33

>ref|XP_002519872.1| conserved hypothetical protein [Ricinus communis]
           gi|223540918|gb|EEF42476.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 220

 Score =  157 bits (396), Expect = 3e-36
 Identities = 93/188 (49%), Positives = 104/188 (55%), Gaps = 1/188 (0%)
 Frame = -3

Query: 638 STYSISSRNKLTTSQFPVTQNTEIFYLNQT-CXXXXXXXXXLKSPRGFGXXXXXXXXXXX 462
           ST++ S       SQFP+++    FY NQ            L SPRGFG           
Sbjct: 35  STFTFSLSPIKQASQFPISKQN--FYPNQYHFSYPKPLYATLNSPRGFGPSPKKTKRTKK 92

Query: 461 XPTRXXXXXXXXXXXXXXXXXXXDSVIPEVVTNRMMGRMGLSXXXXXXXXXXXXXXXXXL 282
             T                      +IPEVVTNRM+ RMG S                 L
Sbjct: 93  LKT-VNPNDDDDDDNNDDDDEQDAGIIPEVVTNRMISRMGFSVGVPLFIGLLFFPFFYYL 151

Query: 281 KVGLKIDVPTWVPFIVSFIFFGSALFGVSYGIVSTSWDPMREGSLLGWNEAKKNWPVFWQ 102
           KVGLKIDVPTWVP+IVSF FFG+AL GVSYGIVS+SWDPMREGSLLGWNEA+KNWPVFWQ
Sbjct: 152 KVGLKIDVPTWVPYIVSFFFFGTALLGVSYGIVSSSWDPMREGSLLGWNEAQKNWPVFWQ 211

Query: 101 SLRGRSGK 78
           S  GRSGK
Sbjct: 212 SFWGRSGK 219


>ref|XP_002326584.1| predicted protein [Populus trichocarpa] gi|222833906|gb|EEE72383.1|
           predicted protein [Populus trichocarpa]
          Length = 226

 Score =  155 bits (393), Expect = 6e-36
 Identities = 77/103 (74%), Positives = 80/103 (77%)
 Frame = -3

Query: 386 VIPEVVTNRMMGRMGLSXXXXXXXXXXXXXXXXXLKVGLKIDVPTWVPFIVSFIFFGSAL 207
           VIPEVVTNRMM RMG+S                 LKVGLKIDVPTWVPFIVSFIFFGSAL
Sbjct: 123 VIPEVVTNRMMTRMGISVGAPLFVGVLFFPFFYYLKVGLKIDVPTWVPFIVSFIFFGSAL 182

Query: 206 FGVSYGIVSTSWDPMREGSLLGWNEAKKNWPVFWQSLRGRSGK 78
            GVSYGIVS+SWDP REGS  GWNEA+KNWPVFWQSLRGR GK
Sbjct: 183 LGVSYGIVSSSWDPKREGSFWGWNEAQKNWPVFWQSLRGRPGK 225


>ref|XP_002266174.1| PREDICTED: protein PAM68, chloroplastic [Vitis vinifera]
           gi|147866231|emb|CAN79943.1| hypothetical protein
           VITISV_021078 [Vitis vinifera]
          Length = 196

 Score =  155 bits (393), Expect = 6e-36
 Identities = 94/200 (47%), Positives = 105/200 (52%)
 Frame = -3

Query: 677 MESCQFARIPPLTSTYSISSRNKLTTSQFPVTQNTEIFYLNQTCXXXXXXXXXLKSPRGF 498
           ME C F+   PL S  S  S   L  SQFP++  T   Y              L  P+GF
Sbjct: 1   MECCSFSTTTPLISPPS--STPALYISQFPIS--TPKLYSKNRLLHSTPPCASLNRPKGF 56

Query: 497 GXXXXXXXXXXXXPTRXXXXXXXXXXXXXXXXXXXDSVIPEVVTNRMMGRMGLSXXXXXX 318
           G              +                   + VIPE+VTNRM+ RMG S      
Sbjct: 57  GPSPRKTEKRKKLK-KNYSDDEDEEEEEEEGAEAEEGVIPEIVTNRMISRMGFSVGIPLM 115

Query: 317 XXXXXXXXXXXLKVGLKIDVPTWVPFIVSFIFFGSALFGVSYGIVSTSWDPMREGSLLGW 138
                      LKVGLKIDVPTWVPFIVSF FFGSAL GVSYGIVS+SWDP+REGS LGW
Sbjct: 116 IGLLFFPFFYYLKVGLKIDVPTWVPFIVSFFFFGSALLGVSYGIVSSSWDPLREGSFLGW 175

Query: 137 NEAKKNWPVFWQSLRGRSGK 78
            EA+ NWPVFWQSL GRSGK
Sbjct: 176 TEAQNNWPVFWQSLWGRSGK 195


>emb|CBI24589.3| unnamed protein product [Vitis vinifera]
          Length = 136

 Score =  150 bits (379), Expect = 3e-34
 Identities = 73/103 (70%), Positives = 78/103 (75%)
 Frame = -3

Query: 386 VIPEVVTNRMMGRMGLSXXXXXXXXXXXXXXXXXLKVGLKIDVPTWVPFIVSFIFFGSAL 207
           VIPE+VTNRM+ RMG S                 LKVGLKIDVPTWVPFIVSF FFGSAL
Sbjct: 33  VIPEIVTNRMISRMGFSVGIPLMIGLLFFPFFYYLKVGLKIDVPTWVPFIVSFFFFGSAL 92

Query: 206 FGVSYGIVSTSWDPMREGSLLGWNEAKKNWPVFWQSLRGRSGK 78
            GVSYGIVS+SWDP+REGS LGW EA+ NWPVFWQSL GRSGK
Sbjct: 93  LGVSYGIVSSSWDPLREGSFLGWTEAQNNWPVFWQSLWGRSGK 135


>ref|XP_003612620.1| hypothetical protein MTR_5g027010 [Medicago truncatula]
           gi|355513955|gb|AES95578.1| hypothetical protein
           MTR_5g027010 [Medicago truncatula]
          Length = 202

 Score =  148 bits (374), Expect = 1e-33
 Identities = 72/104 (69%), Positives = 79/104 (75%)
 Frame = -3

Query: 386 VIPEVVTNRMMGRMGLSXXXXXXXXXXXXXXXXXLKVGLKIDVPTWVPFIVSFIFFGSAL 207
           +IPEVVTNRM+GRM LS                 LKVGLKIDVP WVPF+VSF FFGSAL
Sbjct: 99  IIPEVVTNRMIGRMALSVGIPLSVGLLFFPFFYYLKVGLKIDVPNWVPFLVSFFFFGSAL 158

Query: 206 FGVSYGIVSTSWDPMREGSLLGWNEAKKNWPVFWQSLRGRSGKN 75
            GVSYGIVS SWDP+REGSLLGW EA+KNWPVFW+SLRG S K+
Sbjct: 159 LGVSYGIVSASWDPLREGSLLGWTEAQKNWPVFWKSLRGGSQKD 202


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