BLASTX nr result

ID: Coptis21_contig00018567 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018567
         (700 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69131.1| hypothetical protein VITISV_012047 [Vitis vinifera]   181   2e-43
ref|XP_003534716.1| PREDICTED: uncharacterized protein LOC100804...   165   7e-39
gb|ABD32654.1| Zinc finger, RING-type [Medicago truncatula]           160   2e-37
ref|XP_003547273.1| PREDICTED: uncharacterized protein LOC100804...   159   7e-37
ref|XP_003610487.1| hypothetical protein MTR_4g132760 [Medicago ...   156   4e-36

>emb|CAN69131.1| hypothetical protein VITISV_012047 [Vitis vinifera]
          Length = 207

 Score =  181 bits (458), Expect = 2e-43
 Identities = 104/198 (52%), Positives = 122/198 (61%), Gaps = 20/198 (10%)
 Frame = -1

Query: 610 KWKSFKQRLGLKKMSCCGGSWSFRATSNMVXXXXXXXXE---LTATANA-----GQNQVG 455
           +W+S K+RLG KKMSCCG SW FR ++  V        +     A A A      Q +VG
Sbjct: 9   RWRSIKRRLGFKKMSCCGASWGFRPSTMTVREDDNDDDDGVQTQAQAQAQSMAQAQEEVG 68

Query: 454 NLMD-LDPDPDCVGDI-LATGMNLATALAAEREFRAAQEWEGGSVGPTSA--------SP 305
                + PD  CVG+  ++  MNLATALAAER+ RAAQ+     VGPT+         +P
Sbjct: 69  QASPGISPDRGCVGEAPVSPRMNLATALAAERQMRAAQDVATVXVGPTNGGTSEGAPGTP 128

Query: 304 KRVSLIRLLXXXXXXXXXXXXXXXXES--MCCVCMGRKKGAAFIPCGHTFCRVCSREIWL 131
            RVSL+RLL                 S  +CCVCMGRKKGAAFIPCGHTFCRVCSRE+WL
Sbjct: 129 LRVSLLRLLEESDGGDGEMEKERGAGSDQLCCVCMGRKKGAAFIPCGHTFCRVCSRELWL 188

Query: 130 NRGSCPLCNRSILEILDI 77
           NRGSCPLCNRSILEILDI
Sbjct: 189 NRGSCPLCNRSILEILDI 206


>ref|XP_003534716.1| PREDICTED: uncharacterized protein LOC100804292 [Glycine max]
          Length = 196

 Score =  165 bits (418), Expect = 7e-39
 Identities = 95/189 (50%), Positives = 112/189 (59%), Gaps = 5/189 (2%)
 Frame = -1

Query: 628 VDHRGKKWKSFKQRLGLKKMSCCGGSWSFRATSNMVXXXXXXXXELTATANAGQNQVGNL 449
           VD   ++ +SFK+R G   M CCG +W FR+ +            L+ T    Q Q    
Sbjct: 30  VDSGTRRRRSFKERFGFIGMGCCGATWGFRSDA------------LSVTQGEQQQQ---- 73

Query: 448 MDLDPDPDCVGDI-LATGMNLATALAAEREFRAAQEWEGGSVGPTSASPKRVSLIRLLXX 272
              + DP+CVG   L +GMNLA ALAAER+ R  QE    + G    +P RVSL+RLL  
Sbjct: 74  ---ETDPECVGPAGLGSGMNLAAALAAERQLRGPQEEAVRAPG----TPWRVSLMRLLEE 126

Query: 271 XXXXXXXXXXXXXXE----SMCCVCMGRKKGAAFIPCGHTFCRVCSREIWLNRGSCPLCN 104
                              S+CCVCMGRKKGAAFIPCGHTFCRVCSRE+WLNRGSCPLCN
Sbjct: 127 TEAEKEKEKEKEENVVGNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCN 186

Query: 103 RSILEILDI 77
           RSILEILDI
Sbjct: 187 RSILEILDI 195


>gb|ABD32654.1| Zinc finger, RING-type [Medicago truncatula]
          Length = 304

 Score =  160 bits (406), Expect = 2e-37
 Identities = 93/199 (46%), Positives = 115/199 (57%), Gaps = 15/199 (7%)
 Frame = -1

Query: 628 VDHRGKKWKSFKQRLGLKKMSCCGGSWSFRATSNMVXXXXXXXXELTATANAGQNQVGNL 449
           VD   ++ +SFK+RLG   + CCG +W FR++S+               +++ QNQ   +
Sbjct: 123 VDGVPRRRRSFKERLGF--IGCCGANWGFRSSSS---------------SDSQQNQQ-RI 164

Query: 448 MDLDPDPD---CVGDILATG-----MNLATALAAEREFRAAQEWEGGSVGPTSASPKRVS 293
           +D DP  D   CV  ++ TG     MNLA ALAAER+ R       G  G    +P RVS
Sbjct: 165 LDTDPSEDPNMCVAPVIQTGSSSSSMNLAAALAAERQLRGPAAETSGGGGRMPGTPWRVS 224

Query: 292 LIRLLXXXXXXXXXXXXXXXXE-------SMCCVCMGRKKGAAFIPCGHTFCRVCSREIW 134
           L+RLL                        S+CCVCMGR KGAAFIPCGHTFCRVCSRE+W
Sbjct: 225 LMRLLEETENGDTVVVKAEEKVGTMAGNDSVCCVCMGRNKGAAFIPCGHTFCRVCSRELW 284

Query: 133 LNRGSCPLCNRSILEILDI 77
           LNRGSCPLCNRSI+EILDI
Sbjct: 285 LNRGSCPLCNRSIIEILDI 303


>ref|XP_003547273.1| PREDICTED: uncharacterized protein LOC100804959 [Glycine max]
          Length = 209

 Score =  159 bits (401), Expect = 7e-37
 Identities = 96/197 (48%), Positives = 113/197 (57%), Gaps = 13/197 (6%)
 Frame = -1

Query: 628 VDHRGKKWKSFKQRLGLKKMSCCGGSWSFRATSNMVXXXXXXXXELTATANAGQNQVGNL 449
           VD   ++ +S K+R G   M CCG SW FR+ +  V              N G+ +    
Sbjct: 33  VDGGTRRRRSLKERFGFIGMGCCGASWGFRSDALSV--------------NQGEQE--QQ 76

Query: 448 MDLDPD----PDCVGDI-LATGMNLATALAAEREFRAAQEWEGGSVGPTSASPKRVSLIR 284
            + DP     P+CVG     +GMNLA ALAAER+ R  QE EGG V     +P RVSL+R
Sbjct: 77  QETDPGRVAAPECVGPAGSGSGMNLAAALAAERQLRVPQE-EGGGV----RAPWRVSLMR 131

Query: 283 LLXXXXXXXXXXXXXXXXE--------SMCCVCMGRKKGAAFIPCGHTFCRVCSREIWLN 128
           LL                +        S+CCVCMGRKKGAA IPCGHTFCRVCSRE+WLN
Sbjct: 132 LLEETEGGDAATAEKEKEKEENVLGNDSVCCVCMGRKKGAALIPCGHTFCRVCSRELWLN 191

Query: 127 RGSCPLCNRSILEILDI 77
           RGSCPLCNRSILEILDI
Sbjct: 192 RGSCPLCNRSILEILDI 208


>ref|XP_003610487.1| hypothetical protein MTR_4g132760 [Medicago truncatula]
           gi|355511542|gb|AES92684.1| hypothetical protein
           MTR_4g132760 [Medicago truncatula]
          Length = 217

 Score =  156 bits (394), Expect = 4e-36
 Identities = 88/184 (47%), Positives = 106/184 (57%), Gaps = 8/184 (4%)
 Frame = -1

Query: 604 KSFKQRLGLKKMSCCGGSWSFRATSNMVXXXXXXXXELTATANAGQNQVGNLMDLDPDP- 428
           +S K+R     M CCG +W FR    ++             A   Q Q   + D DP+P 
Sbjct: 40  RSLKERFRFTGMGCCGATWVFRP---IIRHEHHHQRNEEGEATVEQQQQLQVQDQDPNPV 96

Query: 427 ----DCVGDILATGMNLATALAAEREFRAAQEWEGGSVGPTSASPKRVSLIRLLXXXXXX 260
               +       +GMNLA ALAAER+ R ++E  GG      A+P RVSL++LL      
Sbjct: 97  EPECEAPAGSSGSGMNLAAALAAERQMRVSEEASGGE----GATPWRVSLMKLLEETEGE 152

Query: 259 XXXXXXXXXXE---SMCCVCMGRKKGAAFIPCGHTFCRVCSREIWLNRGSCPLCNRSILE 89
                     E   S+CCVCMGRKKGAAFIPCGHTFCRVCSRE+WLNRG+CPLCNRSILE
Sbjct: 153 NESNAGAVVVEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILE 212

Query: 88  ILDI 77
           ILDI
Sbjct: 213 ILDI 216


Top