BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018545
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsi...    61   8e-08
emb|CAN67123.1| hypothetical protein VITISV_040164 [Vitis vinifera]    43   2e-07
emb|CAB10380.1| reverse transcriptase like protein [Arabidopsis ...    57   4e-07
emb|CAN67119.1| hypothetical protein VITISV_017483 [Vitis vinifera]    43   4e-07
emb|CAN60796.1| hypothetical protein VITISV_015834 [Vitis vinifera]    45   7e-07

>gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1149

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 26/45 (57%), Positives = 34/45 (75%)
 Frame = -1

Query: 243 PVSSFGGYKYYASIVDDWSRYCSIYPICNKSDFCSVFAKFQSIVE 109
           PVSS  G++YY   +D+ SR+C  YP+ +KSDFCS+F KFQS VE
Sbjct: 516 PVSSIQGFQYYVIFIDNRSRFCWFYPLKHKSDFCSLFMKFQSFVE 560


>emb|CAN67123.1| hypothetical protein VITISV_040164 [Vitis vinifera]
          Length = 982

 Score = 42.7 bits (99), Expect(2) = 2e-07
 Identities = 18/36 (50%), Positives = 25/36 (69%)
 Frame = -2

Query: 110 KQHRHLVETARTLMAHSGVQILYWVEVFHTSIYLIN 3
           +++RHLVET RTL+ HS V   +W +   T+ YLIN
Sbjct: 434 RKNRHLVETTRTLLLHSNVPFRFWEDAVLTTCYLIN 469



 Score = 37.0 bits (84), Expect(2) = 2e-07
 Identities = 13/40 (32%), Positives = 29/40 (72%)
 Frame = -1

Query: 225 GYKYYASIVDDWSRYCSIYPICNKSDFCSVFAKFQSIVET 106
           G++Y+A+ +DD+SR   ++ + N+++  S+F KF + ++T
Sbjct: 356 GFQYFATFIDDYSRCTWLFLMKNRAELFSIFQKFYAEIQT 395


>emb|CAB10380.1| reverse transcriptase like protein [Arabidopsis thaliana]
           gi|7268350|emb|CAB78643.1| reverse transcriptase like
           protein [Arabidopsis thaliana]
          Length = 1942

 Score = 57.0 bits (136), Expect(2) = 4e-07
 Identities = 23/45 (51%), Positives = 34/45 (75%)
 Frame = -1

Query: 243 PVSSFGGYKYYASIVDDWSRYCSIYPICNKSDFCSVFAKFQSIVE 109
           PV S  G++YY   +D++SRYC  YP+  KSDF ++FAKFQ++V+
Sbjct: 455 PVMSVQGFRYYVIFIDNYSRYCWFYPLKLKSDFYTIFAKFQALVQ 499



 Score = 57.0 bits (136), Expect(2) = 4e-07
 Identities = 23/45 (51%), Positives = 34/45 (75%)
 Frame = -1

Query: 243  PVSSFGGYKYYASIVDDWSRYCSIYPICNKSDFCSVFAKFQSIVE 109
            PV S  G++YY   +D++SRYC  YP+  KSDF ++FAKFQ++V+
Sbjct: 1355 PVMSVQGFRYYVIFIDNYSRYCWFYPLKLKSDFYTIFAKFQALVQ 1399



 Score = 21.6 bits (44), Expect(2) = 4e-07
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 44  YWVEVFHTSIYLIN 3
           +WVE F+T+ +L N
Sbjct: 525 HWVEAFYTTNFLSN 538



 Score = 21.6 bits (44), Expect(2) = 4e-07
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 44   YWVEVFHTSIYLIN 3
            +WVE F+T+ +L N
Sbjct: 1425 HWVEAFYTTNFLSN 1438


>emb|CAN67119.1| hypothetical protein VITISV_017483 [Vitis vinifera]
          Length = 1970

 Score = 43.1 bits (100), Expect(2) = 4e-07
 Identities = 19/36 (52%), Positives = 26/36 (72%)
 Frame = -2

Query: 110 KQHRHLVETARTLMAHSGVQILYWVEVFHTSIYLIN 3
           +++RHLVETARTL+ HS V   +W +   T+ YLIN
Sbjct: 568 RKNRHLVETARTLLLHSHVPFRFWGDAVLTACYLIN 603



 Score = 35.4 bits (80), Expect(2) = 4e-07
 Identities = 12/40 (30%), Positives = 28/40 (70%)
 Frame = -1

Query: 225 GYKYYASIVDDWSRYCSIYPICNKSDFCSVFAKFQSIVET 106
           G++Y+ + +DD+SR   ++ + N+++  S+F KF + ++T
Sbjct: 492 GFQYFVTFIDDYSRCTWLFLMKNRAELFSIFQKFYTQIQT 531


>emb|CAN60796.1| hypothetical protein VITISV_015834 [Vitis vinifera]
          Length = 1186

 Score = 45.4 bits (106), Expect(2) = 7e-07
 Identities = 21/46 (45%), Positives = 31/46 (67%)
 Frame = -1

Query: 243 PVSSFGGYKYYASIVDDWSRYCSIYPICNKSDFCSVFAKFQSIVET 106
           PV+S GG +YY + +DD SR   +Y + NKSD    F K++++VET
Sbjct: 253 PVASLGGSRYYITFIDDSSRNVWVYFLKNKSDVFVTFKKWKAMVET 298



 Score = 32.3 bits (72), Expect(2) = 7e-07
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = -2

Query: 110 KQHRHLVETARTLMAHSGVQILYWVEVFHTSIYLIN 3
           + +R L E AR++  H+G+   +W +   T+ YLIN
Sbjct: 323 RMNRTLNERARSMRLHAGLPKTFWADAVSTAAYLIN 358