BLASTX nr result

ID: Coptis21_contig00018505 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018505
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306231.1| predicted protein [Populus trichocarpa] gi|2...   158   5e-37
emb|CBI28351.3| unnamed protein product [Vitis vinifera]              155   2e-36
ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containi...   155   2e-36
gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indi...   154   7e-36
ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group] g...   154   7e-36

>ref|XP_002306231.1| predicted protein [Populus trichocarpa] gi|222849195|gb|EEE86742.1|
           predicted protein [Populus trichocarpa]
          Length = 480

 Score =  158 bits (399), Expect = 5e-37
 Identities = 73/112 (65%), Positives = 92/112 (82%), Gaps = 1/112 (0%)
 Frame = -3

Query: 333 GYGRKALEIFKEMEALSL-VDSVTFVNVICACTHAGLTEDGQRYFELMVDNYRIKPTMEH 157
           GYGRKALE+F+EM+  +L +D VTF+ VI ACTH GL  +GQRYF++MV ++ I+P MEH
Sbjct: 188 GYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGLANEGQRYFDIMVKDHHIEPRMEH 247

Query: 156 YACMVDLYGRAGRLKEAMDLITDMPFPAGANVWRTLLGACHVHRNLELGKWA 1
           Y+CMVDLYGRAG L +AM++I +MPFPA ANVWRTLL A  +HRNLE+GK A
Sbjct: 248 YSCMVDLYGRAGMLVKAMEIINEMPFPASANVWRTLLAASCIHRNLEVGKLA 299


>emb|CBI28351.3| unnamed protein product [Vitis vinifera]
          Length = 770

 Score =  155 bits (393), Expect = 2e-36
 Identities = 72/112 (64%), Positives = 91/112 (81%), Gaps = 1/112 (0%)
 Frame = -3

Query: 333 GYGRKALEIFKEMEALSL-VDSVTFVNVICACTHAGLTEDGQRYFELMVDNYRIKPTMEH 157
           G G+K+L+IF+EM + +L +D +TF+ VI ACTHAGL  +GQRYF+LMV +Y I PTMEH
Sbjct: 478 GCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEH 537

Query: 156 YACMVDLYGRAGRLKEAMDLITDMPFPAGANVWRTLLGACHVHRNLELGKWA 1
           Y+CMVDLY RAG L++AMDLI  MPFPAGA +WRTLL AC VH N++LG+ A
Sbjct: 538 YSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELA 589


>ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 866

 Score =  155 bits (393), Expect = 2e-36
 Identities = 72/112 (64%), Positives = 91/112 (81%), Gaps = 1/112 (0%)
 Frame = -3

Query: 333 GYGRKALEIFKEMEALSL-VDSVTFVNVICACTHAGLTEDGQRYFELMVDNYRIKPTMEH 157
           G G+K+L+IF+EM + +L +D +TF+ VI ACTHAGL  +GQRYF+LMV +Y I PTMEH
Sbjct: 574 GCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEH 633

Query: 156 YACMVDLYGRAGRLKEAMDLITDMPFPAGANVWRTLLGACHVHRNLELGKWA 1
           Y+CMVDLY RAG L++AMDLI  MPFPAGA +WRTLL AC VH N++LG+ A
Sbjct: 634 YSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELA 685


>gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
          Length = 874

 Score =  154 bits (389), Expect = 7e-36
 Identities = 72/112 (64%), Positives = 89/112 (79%), Gaps = 1/112 (0%)
 Frame = -3

Query: 333 GYGRKALEIFKEMEALSL-VDSVTFVNVICACTHAGLTEDGQRYFELMVDNYRIKPTMEH 157
           GY  KA+E F++MEA  + +D VTF+ VI  CTH GL  +GQ+YF+ MV +++I PTMEH
Sbjct: 582 GYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEH 641

Query: 156 YACMVDLYGRAGRLKEAMDLITDMPFPAGANVWRTLLGACHVHRNLELGKWA 1
           YACMVDLY RAG+L E M LI DMPFPAGA VWRTLLGAC VH+N+ELGK++
Sbjct: 642 YACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFS 693


>ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
           gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa
           Japonica Group] gi|113579278|dbj|BAF17641.1|
           Os05g0455900 [Oryza sativa Japonica Group]
           gi|222631826|gb|EEE63958.1| hypothetical protein
           OsJ_18783 [Oryza sativa Japonica Group]
          Length = 874

 Score =  154 bits (389), Expect = 7e-36
 Identities = 72/112 (64%), Positives = 89/112 (79%), Gaps = 1/112 (0%)
 Frame = -3

Query: 333 GYGRKALEIFKEMEALSL-VDSVTFVNVICACTHAGLTEDGQRYFELMVDNYRIKPTMEH 157
           GY  KA+E F++MEA  + +D VTF+ VI  CTH GL  +GQ+YF+ MV +++I PTMEH
Sbjct: 582 GYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEH 641

Query: 156 YACMVDLYGRAGRLKEAMDLITDMPFPAGANVWRTLLGACHVHRNLELGKWA 1
           YACMVDLY RAG+L E M LI DMPFPAGA VWRTLLGAC VH+N+ELGK++
Sbjct: 642 YACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFS 693


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