BLASTX nr result

ID: Coptis21_contig00018467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018467
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77484.1| hypothetical protein VITISV_040060 [Vitis vinifera]   283   1e-74
ref|XP_002267432.2| PREDICTED: uncharacterized protein LOC100253...   280   7e-74
ref|XP_002325792.1| predicted protein [Populus trichocarpa] gi|2...   266   1e-69
ref|XP_003555563.1| PREDICTED: uncharacterized protein LOC100808...   263   2e-68
emb|CBI28650.3| unnamed protein product [Vitis vinifera]              262   3e-68

>emb|CAN77484.1| hypothetical protein VITISV_040060 [Vitis vinifera]
          Length = 383

 Score =  283 bits (723), Expect = 1e-74
 Identities = 138/190 (72%), Positives = 157/190 (82%), Gaps = 14/190 (7%)
 Frame = +2

Query: 2   KINKPAIKTIESPDGDIIDCVHRHKQPALDHPLLKNHRIQRLPPERPRFKV-SKEENVMK 178
           KINKPA++TIESPDGDIIDCVH+ KQPALDHPLLKNH+IQR+PPE PR K  +K E V +
Sbjct: 62  KINKPAVRTIESPDGDIIDCVHKRKQPALDHPLLKNHKIQRVPPEMPRAKTKTKGEEVKR 121

Query: 179 NYN------------GSEHAWQMWHQSGDKCPQGTVPIRRSSVHDVLRAKSLYHYGKKPT 322
           +YN             S  AWQMWHQ+  +CP+GTVPIRRS+VHDVLRAKSLY +G+K  
Sbjct: 122 DYNTTSSNSEERTVVSSRGAWQMWHQNRTRCPKGTVPIRRSTVHDVLRAKSLYDFGRKQR 181

Query: 323 RLHLDRRVDAPDVVSGNGHEHAIAYTGTSQEIYGAKATINVWDPKIEVVNEFSLSQIWVL 502
           R+ L RR DAPDVVSGNGHEHAIAYTGTSQE+YGA+ATINVWDP I+VVNEFSLSQIW+L
Sbjct: 182 RMXLARRTDAPDVVSGNGHEHAIAYTGTSQEVYGARATINVWDPSIQVVNEFSLSQIWIL 241

Query: 503 SGSFD-SDLN 529
           SGSFD SDLN
Sbjct: 242 SGSFDGSDLN 251


>ref|XP_002267432.2| PREDICTED: uncharacterized protein LOC100253635 isoform 1 [Vitis
           vinifera]
          Length = 420

 Score =  280 bits (717), Expect = 7e-74
 Identities = 138/190 (72%), Positives = 155/190 (81%), Gaps = 14/190 (7%)
 Frame = +2

Query: 2   KINKPAIKTIESPDGDIIDCVHRHKQPALDHPLLKNHRIQRLPPERPRFKV-SKEENVMK 178
           KINKPA+ TIESPDGDIIDCVH+ KQPALDHPLLKNH+IQR PPE PR K  +K E V +
Sbjct: 32  KINKPAVMTIESPDGDIIDCVHKRKQPALDHPLLKNHKIQRAPPEMPRAKTKTKGEEVKR 91

Query: 179 NYN------------GSEHAWQMWHQSGDKCPQGTVPIRRSSVHDVLRAKSLYHYGKKPT 322
           +YN             S  AWQMWHQ+  +CP+GTVPIRRS+VHDVLRAKSLY +G+K  
Sbjct: 92  DYNTTSSNSEERTVLSSRGAWQMWHQNRTRCPKGTVPIRRSTVHDVLRAKSLYDFGRKQR 151

Query: 323 RLHLDRRVDAPDVVSGNGHEHAIAYTGTSQEIYGAKATINVWDPKIEVVNEFSLSQIWVL 502
           R+ L RR DAPDVVSGNGHEHAIAYTGTSQE+YGA+ATINVWDP I+VVNEFSLSQIW+L
Sbjct: 152 RMPLARRTDAPDVVSGNGHEHAIAYTGTSQEVYGARATINVWDPSIQVVNEFSLSQIWIL 211

Query: 503 SGSFD-SDLN 529
           SGSFD SDLN
Sbjct: 212 SGSFDGSDLN 221


>ref|XP_002325792.1| predicted protein [Populus trichocarpa] gi|222862667|gb|EEF00174.1|
           predicted protein [Populus trichocarpa]
          Length = 396

 Score =  266 bits (681), Expect = 1e-69
 Identities = 130/186 (69%), Positives = 152/186 (81%), Gaps = 10/186 (5%)
 Frame = +2

Query: 2   KINKPAIKTIESPDGDIIDCVHRHKQPALDHPLLKNHRIQRLPPERPRFKVSKEENVMKN 181
           KINKP + TIESPDGDIIDCVH+ KQPALDHPLLKNH+IQR PPE PR K  KE++ +++
Sbjct: 12  KINKPPVMTIESPDGDIIDCVHKRKQPALDHPLLKNHKIQREPPEMPRVKALKEDDELRS 71

Query: 182 YN--------GSEHAWQMWHQSGDKCPQGTVPIRRSSVHDVLRAKSLYHYGKKPTR-LHL 334
                     G   +WQMWH++G +CPQGTVPIRRS+VHDVLRAKSL+ +GKK  R + L
Sbjct: 72  ERTKKSNEAEGVRGSWQMWHRNGTRCPQGTVPIRRSTVHDVLRAKSLFDFGKKQQRSISL 131

Query: 335 DRRVDAPDVVSGNGHEHAIAYTGTSQEIYGAKATINVWDPKIEVVNEFSLSQIWVLSGSF 514
            R +DAPDVVSGNGHEHAIAYTG+SQE+YGA+ATINVW P I+ VNEFSLSQIW+LSGSF
Sbjct: 132 ARHMDAPDVVSGNGHEHAIAYTGSSQEVYGARATINVWGPTIQGVNEFSLSQIWILSGSF 191

Query: 515 D-SDLN 529
           D SDLN
Sbjct: 192 DGSDLN 197


>ref|XP_003555563.1| PREDICTED: uncharacterized protein LOC100808774 [Glycine max]
          Length = 429

 Score =  263 bits (671), Expect = 2e-68
 Identities = 125/179 (69%), Positives = 152/179 (84%), Gaps = 3/179 (1%)
 Frame = +2

Query: 2   KINKPAIKTIESPDGDIIDCVHRHKQPALDHPLLKNHRIQRLPPERPR-FKVSKEENVMK 178
           KINKP + TIESPDGD+IDCVH+ KQ ALDHPLLKNH+IQ++P E P+  KV + E+ M+
Sbjct: 52  KINKPPVLTIESPDGDLIDCVHKRKQLALDHPLLKNHKIQKMPTEMPKGMKVMRVEDDME 111

Query: 179 NYNGSEHAWQMWHQSGDKCPQGTVPIRRSSVHDVLRAKSLYHYGKKPTRLH-LDRRVDAP 355
                E AWQMWH +G +CP+GTVPIRRS+VHDV+RAKSLY +GKK +R+  L RR DAP
Sbjct: 112 KVRVREKAWQMWHLNGTRCPKGTVPIRRSTVHDVMRAKSLYDFGKKRSRVDSLSRRNDAP 171

Query: 356 DVVSGNGHEHAIAYTGTSQEIYGAKATINVWDPKIEVVNEFSLSQIWVLSGSFD-SDLN 529
           D++SGNGHEHAIAYTG+SQE+YGAKATINVWDP I+V+NEFSLSQ+W+LSGSFD +DLN
Sbjct: 172 DILSGNGHEHAIAYTGSSQEMYGAKATINVWDPSIQVINEFSLSQLWILSGSFDGTDLN 230


>emb|CBI28650.3| unnamed protein product [Vitis vinifera]
          Length = 403

 Score =  262 bits (669), Expect = 3e-68
 Identities = 131/189 (69%), Positives = 148/189 (78%), Gaps = 13/189 (6%)
 Frame = +2

Query: 2   KINKPAIKTIESPDGDIIDCVHRHKQPALDHPLLKNHRIQRLPPERPRFKVSKEENVMKN 181
           KINKPA+ TIESPDGDIIDCVH+ KQPALDHPLLKNH+IQ           +K E V ++
Sbjct: 25  KINKPAVMTIESPDGDIIDCVHKRKQPALDHPLLKNHKIQTK---------TKGEEVKRD 75

Query: 182 YN------------GSEHAWQMWHQSGDKCPQGTVPIRRSSVHDVLRAKSLYHYGKKPTR 325
           YN             S  AWQMWHQ+  +CP+GTVPIRRS+VHDVLRAKSLY +G+K  R
Sbjct: 76  YNTTSSNSEERTVLSSRGAWQMWHQNRTRCPKGTVPIRRSTVHDVLRAKSLYDFGRKQRR 135

Query: 326 LHLDRRVDAPDVVSGNGHEHAIAYTGTSQEIYGAKATINVWDPKIEVVNEFSLSQIWVLS 505
           + L RR DAPDVVSGNGHEHAIAYTGTSQE+YGA+ATINVWDP I+VVNEFSLSQIW+LS
Sbjct: 136 MPLARRTDAPDVVSGNGHEHAIAYTGTSQEVYGARATINVWDPSIQVVNEFSLSQIWILS 195

Query: 506 GSFD-SDLN 529
           GSFD SDLN
Sbjct: 196 GSFDGSDLN 204


Top