BLASTX nr result

ID: Coptis21_contig00018460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018460
         (1034 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282636.1| PREDICTED: origin recognition complex subuni...   450   e-124
ref|XP_004152733.1| PREDICTED: origin recognition complex subuni...   436   e-120
ref|XP_002527745.1| plant origin recognition complex subunit, pu...   426   e-117
ref|XP_002879682.1| ATORC2/ORC2 [Arabidopsis lyrata subsp. lyrat...   414   e-113
ref|NP_181292.1| origin recognition complex subunit 2 [Arabidops...   413   e-113

>ref|XP_002282636.1| PREDICTED: origin recognition complex subunit 2-like [Vitis
           vinifera]
          Length = 362

 Score =  450 bits (1158), Expect = e-124
 Identities = 213/275 (77%), Positives = 246/275 (89%)
 Frame = +1

Query: 1   YGFGSKKTLIEDFASTALTEYGVIVINGYLQSVNLKHVVIAMAEILWDQLKINRKSSGGS 180
           YGFGSKK LIEDFASTALTE  V+VINGYLQS+N+K  V A+AE LWDQLK  R  SG  
Sbjct: 87  YGFGSKKALIEDFASTALTECAVLVINGYLQSINIKQAVTAIAEALWDQLKTRRTPSGDF 146

Query: 181 TYKIQKPFSSQSMEELLTFLDGPHAKDSDCFVCIVIHNIDGPGLRELESQQNLARLASCS 360
             K+Q+PF+S+SM++LL F+DG H++ +DCFVC+VIHNIDGPGLR+ ++QQ LAR+A+CS
Sbjct: 147 P-KVQQPFNSRSMDDLLAFMDGSHSEKNDCFVCVVIHNIDGPGLRDSDTQQYLARVAACS 205

Query: 361 HVRVVASIDHVNAPLLWDKKMVHTQFNWSWYHVPTFAPYNVEGVFFPLILASGGTAQNAK 540
           H+R+VASIDHVNAPLLWDKKMVHTQFNW WYHVPTF PY  EG+F+PLILA GGTAQ+AK
Sbjct: 206 HIRMVASIDHVNAPLLWDKKMVHTQFNWCWYHVPTFVPYKAEGIFYPLILAHGGTAQSAK 265

Query: 541 TALIVLQSLTPNAQSVFKVLAEHQLAHSDEEGMPTNDLYTICRERFLVSSQITLNSHLTE 720
           TA IVLQSLTPNAQSVFKVLAEHQLAH DEEGMP N+LY+ICRERFLVSSQITLNSHLTE
Sbjct: 266 TAAIVLQSLTPNAQSVFKVLAEHQLAHPDEEGMPVNNLYSICRERFLVSSQITLNSHLTE 325

Query: 721 FRDHDLVKTRRHADGQDCLYIPLTSEALEKLLQEI 825
           F+DH+L+KTRRH+DGQDCLYIPL +EALEKLLQ+I
Sbjct: 326 FKDHELIKTRRHSDGQDCLYIPLATEALEKLLQDI 360


>ref|XP_004152733.1| PREDICTED: origin recognition complex subunit 2-like [Cucumis
           sativus] gi|449496004|ref|XP_004160009.1| PREDICTED:
           origin recognition complex subunit 2-like [Cucumis
           sativus]
          Length = 360

 Score =  436 bits (1121), Expect = e-120
 Identities = 209/275 (76%), Positives = 243/275 (88%)
 Frame = +1

Query: 1   YGFGSKKTLIEDFASTALTEYGVIVINGYLQSVNLKHVVIAMAEILWDQLKINRKSSGGS 180
           YGFGSKK+LIEDFASTAL +Y VIV+NGYLQSVN+K V+IA+AE L DQLK   K++ GS
Sbjct: 87  YGFGSKKSLIEDFASTALMDYSVIVVNGYLQSVNIKQVIIAIAEELSDQLKSRPKNASGS 146

Query: 181 TYKIQKPFSSQSMEELLTFLDGPHAKDSDCFVCIVIHNIDGPGLRELESQQNLARLASCS 360
              + + FSS+SM++L  FL+G + +D DCFVC+VIHNIDGPGLR+ E+Q+ LAR+A+CS
Sbjct: 147 N--VHQTFSSRSMDDLFVFLNGSNEEDKDCFVCVVIHNIDGPGLRDSETQEYLARVAACS 204

Query: 361 HVRVVASIDHVNAPLLWDKKMVHTQFNWSWYHVPTFAPYNVEGVFFPLILASGGTAQNAK 540
           HVR++AS+DHVNAPLLWDKKMVHTQFNW WYHVPTFAPY +EG+FFPLILA GGTAQ+AK
Sbjct: 205 HVRIIASVDHVNAPLLWDKKMVHTQFNWLWYHVPTFAPYKIEGMFFPLILAHGGTAQSAK 264

Query: 541 TALIVLQSLTPNAQSVFKVLAEHQLAHSDEEGMPTNDLYTICRERFLVSSQITLNSHLTE 720
           TA IVLQSLTPNAQSVFKVL EHQL+H DEEGMP + LY ICRERFLVSSQITLNSHLTE
Sbjct: 265 TATIVLQSLTPNAQSVFKVLIEHQLSHPDEEGMPIDKLYAICRERFLVSSQITLNSHLTE 324

Query: 721 FRDHDLVKTRRHADGQDCLYIPLTSEALEKLLQEI 825
           F+DH+LVKTRRH+DGQDCLYIPL SEALEKLL E+
Sbjct: 325 FKDHELVKTRRHSDGQDCLYIPLPSEALEKLLTEL 359


>ref|XP_002527745.1| plant origin recognition complex subunit, putative [Ricinus
           communis] gi|223532886|gb|EEF34658.1| plant origin
           recognition complex subunit, putative [Ricinus communis]
          Length = 363

 Score =  426 bits (1095), Expect = e-117
 Identities = 202/275 (73%), Positives = 239/275 (86%)
 Frame = +1

Query: 1   YGFGSKKTLIEDFASTALTEYGVIVINGYLQSVNLKHVVIAMAEILWDQLKINRKSSGGS 180
           YGFGSKK LIEDFASTALT+Y V+V+NGYLQS+NLK V+IA+AE+  DQLK  R++S   
Sbjct: 87  YGFGSKKALIEDFASTALTKYPVMVVNGYLQSINLKQVIIALAELWSDQLKTKRRTSSSI 146

Query: 181 TYKIQKPFSSQSMEELLTFLDGPHAKDSDCFVCIVIHNIDGPGLRELESQQNLARLASCS 360
             K+ +PFSS+SM++LL FLD  H + +D FVC+VIHNIDGPGLR+ E+Q  LAR+ASCS
Sbjct: 147 LPKVLQPFSSRSMDDLLAFLDASHVEGNDSFVCVVIHNIDGPGLRDSENQHYLARIASCS 206

Query: 361 HVRVVASIDHVNAPLLWDKKMVHTQFNWSWYHVPTFAPYNVEGVFFPLILASGGTAQNAK 540
           H+R++ASIDHVNAPLLWDKKMVHTQFNW WYHVPTFAPY VEG+FFPLILA   TAQ+AK
Sbjct: 207 HIRIIASIDHVNAPLLWDKKMVHTQFNWYWYHVPTFAPYKVEGIFFPLILAHSSTAQSAK 266

Query: 541 TALIVLQSLTPNAQSVFKVLAEHQLAHSDEEGMPTNDLYTICRERFLVSSQITLNSHLTE 720
           TA IVLQSLTPNAQSVFK+LAE+QL+H +EEGMP ++LY + RE FLVSSQ+TLNSHLTE
Sbjct: 267 TAAIVLQSLTPNAQSVFKILAEYQLSHLEEEGMPIDNLYAVSREHFLVSSQVTLNSHLTE 326

Query: 721 FRDHDLVKTRRHADGQDCLYIPLTSEALEKLLQEI 825
           F+DH+LVKTRR  DGQDCLYIPLT++ALEKLL EI
Sbjct: 327 FKDHELVKTRRRNDGQDCLYIPLTADALEKLLSEI 361


>ref|XP_002879682.1| ATORC2/ORC2 [Arabidopsis lyrata subsp. lyrata]
           gi|297325521|gb|EFH55941.1| ATORC2/ORC2 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 361

 Score =  414 bits (1063), Expect = e-113
 Identities = 197/275 (71%), Positives = 240/275 (87%)
 Frame = +1

Query: 1   YGFGSKKTLIEDFASTALTEYGVIVINGYLQSVNLKHVVIAMAEILWDQLKINRKSSGGS 180
           YGFGSKK LIEDFAS +LTEY VIVINGYL SVNLK V++A+AE+L + LK  RKSSG S
Sbjct: 86  YGFGSKKALIEDFASASLTEYSVIVINGYLPSVNLKQVLLALAELLSELLKCKRKSSG-S 144

Query: 181 TYKIQKPFSSQSMEELLTFLDGPHAKDSDCFVCIVIHNIDGPGLRELESQQNLARLASCS 360
             K Q+ F S+S++++L+FL GP ++D DCF+C+V+HNIDGP LR+ ESQQ LARLASCS
Sbjct: 145 LSKGQETFPSRSIDDILSFLHGPQSEDKDCFICLVVHNIDGPALRDPESQQTLARLASCS 204

Query: 361 HVRVVASIDHVNAPLLWDKKMVHTQFNWSWYHVPTFAPYNVEGVFFPLILASGGTAQNAK 540
           H+R+VASIDHVN+PLLWDKKMVH QFNW W+HVPTFAPYNVEGVFFPL+LA G TAQ AK
Sbjct: 205 HIRIVASIDHVNSPLLWDKKMVHKQFNWLWHHVPTFAPYNVEGVFFPLVLAQGSTAQTAK 264

Query: 541 TALIVLQSLTPNAQSVFKVLAEHQLAHSDEEGMPTNDLYTICRERFLVSSQITLNSHLTE 720
           TA IVLQSLTPNAQ+VFK+LAE+QL+H DE+GMPT+DLY+  R RF VSSQ+TLNSHLTE
Sbjct: 265 TAAIVLQSLTPNAQNVFKILAEYQLSHPDEDGMPTDDLYSASRSRFFVSSQVTLNSHLTE 324

Query: 721 FRDHDLVKTRRHADGQDCLYIPLTSEALEKLLQEI 825
           F+DH+LVKT+R++DGQ+CL IPL+S+AL +LL ++
Sbjct: 325 FKDHELVKTKRNSDGQECLNIPLSSDALRQLLLDL 359


>ref|NP_181292.1| origin recognition complex subunit 2 [Arabidopsis thaliana]
           gi|2498706|sp|Q38899.1|ORC2_ARATH RecName: Full=Origin
           recognition complex subunit 2 gi|1113103|gb|AAC49131.1|
           atOrc2p [Arabidopsis thaliana] gi|3236239|gb|AAC23627.1|
           origin recognition complex protein [Arabidopsis
           thaliana] gi|17979313|gb|AAL49882.1| putative origin
           recognition complex protein [Arabidopsis thaliana]
           gi|20465531|gb|AAM20248.1| putative origin recognition
           complex [Arabidopsis thaliana]
           gi|21593764|gb|AAM65731.1| origin recognition complex
           protein [Arabidopsis thaliana]
           gi|330254322|gb|AEC09416.1| origin recognition complex
           subunit 2 [Arabidopsis thaliana]
          Length = 363

 Score =  413 bits (1061), Expect = e-113
 Identities = 195/275 (70%), Positives = 239/275 (86%)
 Frame = +1

Query: 1   YGFGSKKTLIEDFASTALTEYGVIVINGYLQSVNLKHVVIAMAEILWDQLKINRKSSGGS 180
           YGFGSKK L+EDFAS +LT+Y V+VINGYL SVNLK V++A+AE+L + LK  RKSSG S
Sbjct: 88  YGFGSKKALVEDFASASLTDYSVVVINGYLPSVNLKQVLLALAELLSELLKCKRKSSG-S 146

Query: 181 TYKIQKPFSSQSMEELLTFLDGPHAKDSDCFVCIVIHNIDGPGLRELESQQNLARLASCS 360
             K Q+ F S+SM+++L+FL GP + D DCF+C+V+HNIDGP LR+ ESQQ LARL+SCS
Sbjct: 147 LSKGQETFPSRSMDDILSFLHGPQSGDKDCFICVVVHNIDGPALRDPESQQTLARLSSCS 206

Query: 361 HVRVVASIDHVNAPLLWDKKMVHTQFNWSWYHVPTFAPYNVEGVFFPLILASGGTAQNAK 540
           H+R+VASIDHVNAPLLWDKKMVH QFNW W+HVPTFAPYNVEGVFFPL+LA G TAQ AK
Sbjct: 207 HIRLVASIDHVNAPLLWDKKMVHKQFNWLWHHVPTFAPYNVEGVFFPLVLAQGSTAQTAK 266

Query: 541 TALIVLQSLTPNAQSVFKVLAEHQLAHSDEEGMPTNDLYTICRERFLVSSQITLNSHLTE 720
           TA IVLQSLTPN Q+VFK+LAE+QL+H DE+GMPT+DLY+  RERF VSSQ+TLNSHLTE
Sbjct: 267 TAAIVLQSLTPNGQNVFKILAEYQLSHPDEDGMPTDDLYSASRERFFVSSQVTLNSHLTE 326

Query: 721 FRDHDLVKTRRHADGQDCLYIPLTSEALEKLLQEI 825
           F+DH+LVKT+R++DGQ+CL IPLTS+A+ +LL ++
Sbjct: 327 FKDHELVKTKRNSDGQECLNIPLTSDAIRQLLLDL 361


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