BLASTX nr result

ID: Coptis21_contig00018433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018433
         (704 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284108.1| PREDICTED: dof zinc finger protein DOF3.4 [V...   156   3e-36
ref|XP_003632455.1| PREDICTED: dof zinc finger protein DOF3.4-li...   147   2e-33
ref|XP_003518090.1| PREDICTED: dof zinc finger protein DOF3.4 [G...   146   5e-33
ref|XP_004167286.1| PREDICTED: LOW QUALITY PROTEIN: dof zinc fin...   144   2e-32
ref|XP_004146854.1| PREDICTED: dof zinc finger protein DOF1.7-li...   143   3e-32

>ref|XP_002284108.1| PREDICTED: dof zinc finger protein DOF3.4 [Vitis vinifera]
          Length = 226

 Score =  156 bits (395), Expect = 3e-36
 Identities = 91/195 (46%), Positives = 110/195 (56%), Gaps = 44/195 (22%)
 Frame = +2

Query: 53  GAPPEQEQLPCPRCESNNTKFCYYNNYNSSQPRYFCKACRRYWTQGGALRNIPIGGGTRK 232
           G PP+ E LPCPRC+S NTKFCYYNNYN SQPR+FCK+CRRYWTQGG LRNIP+GGGTRK
Sbjct: 18  GHPPQSEHLPCPRCDSTNTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRNIPVGGGTRK 77

Query: 233 NTYKRSRTSPNS-------TPQSSI---------TQTTEPSNVSIPLNLPGSFTSLLNTP 364
           N+ KRSRT+ +S       TP + I         T+T + + +S+  ++ G FTSLLN+ 
Sbjct: 78  NS-KRSRTATSSSSSTLETTPANPISVSPVLKAETETPQRNGLSLNGDVSGGFTSLLNSQ 136

Query: 365 GADFVGL---------GSDNMG----PGAWSSLMMNYGHFGG---------------NTW 460
           G  F+ L         G D MG     G WS   +     GG               NTW
Sbjct: 137 GPGFLALNGFSLGLGPGFDEMGFGPAKGVWSYPDVGDVVLGGDGTGSGGGSASSSICNTW 196

Query: 461 QLGNDCHAALVDGDC 505
           QL        VDGDC
Sbjct: 197 QLSGG-EVGFVDGDC 210


>ref|XP_003632455.1| PREDICTED: dof zinc finger protein DOF3.4-like [Vitis vinifera]
           gi|147810110|emb|CAN75830.1| hypothetical protein
           VITISV_039634 [Vitis vinifera]
          Length = 220

 Score =  147 bits (371), Expect = 2e-33
 Identities = 79/141 (56%), Positives = 95/141 (67%), Gaps = 16/141 (11%)
 Frame = +2

Query: 35  NKTQHVGAPP-EQEQLPCPRCESNNTKFCYYNNYNSSQPRYFCKACRRYWTQGGALRNIP 211
           +K    GAPP EQE LPCPRC+S NTKFCYYNNYN SQPR+FCK+CRRYWT GG LR+IP
Sbjct: 11  SKPHQTGAPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIP 70

Query: 212 IGGGTRKNTYKRSRTSPNS---------TP----QSSITQTTEP--SNVSIPLNLPGSFT 346
           +GGG+RKN  KRSRT+ +S         TP     S+   T+ P   +V   +N+ GSFT
Sbjct: 71  VGGGSRKNA-KRSRTTTSSASSQEPLPATPVLVSLSTNHATSMPFVGDVKPTVNVCGSFT 129

Query: 347 SLLNTPGADFVGLGSDNMGPG 409
           SLLNT G  F+ LG   +G G
Sbjct: 130 SLLNTQGPGFLALGGFGLGLG 150


>ref|XP_003518090.1| PREDICTED: dof zinc finger protein DOF3.4 [Glycine max]
          Length = 234

 Score =  146 bits (368), Expect = 5e-33
 Identities = 89/196 (45%), Positives = 108/196 (55%), Gaps = 47/196 (23%)
 Frame = +2

Query: 59  PPEQEQLPCPRCESNNTKFCYYNNYNSSQPRYFCKACRRYWTQGGALRNIPIGGGTRKNT 238
           PPEQE LPCPRC+S NTKFCYYNNYN SQPR+FCK+CRRYWT GG LR+IP+GGG+RKN 
Sbjct: 25  PPEQENLPCPRCDSTNTKFCYYNNYNYSQPRHFCKSCRRYWTHGGTLRDIPVGGGSRKNA 84

Query: 239 YKRSRTSPNSTPQSSITQTTEPS-------NVSIPL--------------------NLPG 337
            KRSRT   +   SS T +T  S        +  P+                    N+ G
Sbjct: 85  -KRSRTHHVAATSSSSTSSTMTSAQEHHAHTLLAPVASTHYGVLDGDVKQTSNGNGNVCG 143

Query: 338 SFTSLL-NTPGADFVGLGSDNMGPG-----------AWS-SLMMNYGHFGG-------NT 457
           SFTSLL NT G+ F+ LG   +G G            W+   M++ G+ GG       NT
Sbjct: 144 SFTSLLNNTHGSGFLALGGFGLGHGYDDMGFGIGRSGWAFPGMVDGGNIGGAVASSGLNT 203

Query: 458 WQLGNDCHAALVDGDC 505
           WQL +      V GDC
Sbjct: 204 WQLESG-EGGFVSGDC 218


>ref|XP_004167286.1| PREDICTED: LOW QUALITY PROTEIN: dof zinc finger protein DOF3.4-like
           [Cucumis sativus]
          Length = 239

 Score =  144 bits (363), Expect = 2e-32
 Identities = 90/202 (44%), Positives = 105/202 (51%), Gaps = 51/202 (25%)
 Frame = +2

Query: 59  PPEQEQLPCPRCESNNTKFCYYNNYNSSQPRYFCKACRRYWTQGGALRNIPIGGGTRKNT 238
           PPEQE LPCPRC+S NTKFCYYNNYN SQPR+FCK+CRRYWT GG LR+IP+GGG+RKN 
Sbjct: 25  PPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGSRKNA 84

Query: 239 YKRSRTS-PNSTPQSSITQTTEPSN--------------VSIPL-------------NLP 334
            KRSRT  P S    S + +   SN              V +PL             N+ 
Sbjct: 85  -KRSRTCIPTSAAIVSSSSSGSFSNSVSRLDHHPLPATPVLVPLGGGVGGDLKVGGGNMC 143

Query: 335 GSFTSLLNTPGADFVGLGSDNMGPG---------------AWSSLMMNYGHFG------- 448
           GSFTSLLNT    F+ LG   +G G               AW  L +  G  G       
Sbjct: 144 GSFTSLLNTHAPGFLSLGGFGLGLGSGFEDVGYGTASSRVAWPFLGLGDGGAGVGGHGGT 203

Query: 449 GNTWQLGNDCHAALV-DGDCIN 511
            NTWQ  N   A  V   DC++
Sbjct: 204 PNTWQFENGDAAGFVGSADCLS 225


>ref|XP_004146854.1| PREDICTED: dof zinc finger protein DOF1.7-like [Cucumis sativus]
           gi|449476907|ref|XP_004154872.1| PREDICTED: dof zinc
           finger protein DOF1.7-like [Cucumis sativus]
          Length = 202

 Score =  143 bits (361), Expect = 3e-32
 Identities = 74/142 (52%), Positives = 94/142 (66%), Gaps = 11/142 (7%)
 Frame = +2

Query: 62  PEQEQLPCPRCESNNTKFCYYNNYNSSQPRYFCKACRRYWTQGGALRNIPIGGGTRKNTY 241
           PEQEQL CPRC+S NTKFCYYNNYN SQPR+FCK CRRYWT+GGALRNIP+GGGTRKN+ 
Sbjct: 15  PEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKNS- 73

Query: 242 KRSRTSPNSTPQSSITQTTEPSNVSIP-----------LNLPGSFTSLLNTPGADFVGLG 388
           KR+  +    P SS T +T P+ +++P           L++PGSF+SLL + G    G  
Sbjct: 74  KRAVAATVKRPPSS-TSSTHPNTITVPDHNPIRGYGGGLDIPGSFSSLLASNGQ--FGNL 130

Query: 389 SDNMGPGAWSSLMMNYGHFGGN 454
            + + P      M+  G F G+
Sbjct: 131 LEGVDPNQSEVKMVELGEFSGS 152


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