BLASTX nr result
ID: Coptis21_contig00018426
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00018426
(1688 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002514537.1| ubiquitin-protein ligase, putative [Ricinus ... 471 e-130
ref|XP_002315980.1| predicted protein [Populus trichocarpa] gi|2... 456 e-126
ref|XP_002270150.2| PREDICTED: F-box/FBD/LRR-repeat protein At1g... 441 e-121
ref|XP_004135131.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g... 422 e-115
ref|XP_004155285.1| PREDICTED: LOW QUALITY PROTEIN: F-box/FBD/LR... 422 e-115
>ref|XP_002514537.1| ubiquitin-protein ligase, putative [Ricinus communis]
gi|223546141|gb|EEF47643.1| ubiquitin-protein ligase,
putative [Ricinus communis]
Length = 421
Score = 471 bits (1213), Expect = e-130
Identities = 239/422 (56%), Positives = 300/422 (71%), Gaps = 1/422 (0%)
Frame = -2
Query: 1492 GSDMAPDIISNLPLNVIEGILMCLPLRDAVRTSILSRKWRYRWTTIPQLVFDDTCVPITS 1313
G PD I++LP ++IE IL LP+RDAV+TSILS KWRYRW T+ LVFDD CV +
Sbjct: 2 GDYEVPDFITDLPSSIIESILTRLPIRDAVKTSILSTKWRYRWATLTHLVFDDKCVAMYC 61
Query: 1312 SSLAVTKTKFVSFVDRALLLHRGPIQKFKLSISYLQSCPDIDQWILFLSWRNVKEISLEL 1133
V +++ V F+ RAL LH GPI KF+LS SYLQ CPDIDQW+LFLS ++KE+ LEL
Sbjct: 62 DK-GVLESRLVKFISRALFLHHGPIHKFQLSTSYLQCCPDIDQWLLFLSRSDIKELVLEL 120
Query: 1132 EEKEWYKVPSCLFSCQYLTHLELFRCEVHPPPTFKGFSNLKSLNFQQSYFENGVVESILS 953
E EW++VPSCLF+C+ LT LEL RCE PPP FKGF LKSLN Q +ES++S
Sbjct: 121 GEGEWFRVPSCLFNCKKLTRLELTRCEFDPPPNFKGFLCLKSLNLYQVLVAPEAIESLIS 180
Query: 952 SCPILESFTLTYFDTLSMNICAPNLKYLRLEGEFKDICLENTPLLETICIALYMTEEIAD 773
CP+LES +L+YFD+L +N+ APNLKYL LEGEFKDICLENTPLL + IA+YMTE+IA+
Sbjct: 181 GCPLLESLSLSYFDSLVLNVRAPNLKYLCLEGEFKDICLENTPLLVAMSIAMYMTEDIAE 240
Query: 772 HLEASTTCNLIKALGNVPALERLVAESYFVKYLSVKSVPSRXXXXXXXXXXXXXYQVGFE 593
H E S++CN IK LG VP LERL+ YF KYLS+ P R YQV FE
Sbjct: 241 HFEQSSSCNFIKFLGGVPRLERLIGHIYFTKYLSIGDYPGRHPITYSCLKVIELYQVSFE 300
Query: 592 DVNEISVAICLLVYSPNLEELLFSASSDNEACI-GPDMDYWDKQHPLNCSFKRLQIVSMT 416
D+ EI V + L+ SPNL+EL S SS+ A + PD+D+W K+ P NC+F++L +V +T
Sbjct: 301 DMKEIHVVLRLITNSPNLKELQISGSSNTLAAVEAPDLDFWLKECPRNCTFEKLGVVKLT 360
Query: 415 DMSGVPDEMEFTKFLLAKSPVLKTMSIKSSTYLTVEGAWDMLIELLGFPRASPQARIIYI 236
DMSGVP EMEF KFLLA SPVL+ MSI Y+ ++G +ML+ELL F R+S QA I++I
Sbjct: 361 DMSGVPQEMEFIKFLLANSPVLEMMSITPCVYV-MDGRVNMLVELLKFRRSSAQAEILFI 419
Query: 235 QD 230
QD
Sbjct: 420 QD 421
>ref|XP_002315980.1| predicted protein [Populus trichocarpa] gi|222865020|gb|EEF02151.1|
predicted protein [Populus trichocarpa]
Length = 420
Score = 456 bits (1174), Expect = e-126
Identities = 233/414 (56%), Positives = 297/414 (71%), Gaps = 1/414 (0%)
Frame = -2
Query: 1477 PDIISNLPLNVIEGILMCLPLRDAVRTSILSRKWRYRWTTIPQLVFDDTCVPITSSSLAV 1298
PD+IS+LP +++E IL LP+RDAVRTSILS KWRYRWTT+ LVFDD C+ + S V
Sbjct: 7 PDLISDLPQSILESILTRLPIRDAVRTSILSSKWRYRWTTLTHLVFDDKCIRMCSDR-PV 65
Query: 1297 TKTKFVSFVDRALLLHRGPIQKFKLSISYLQSCPDIDQWILFLSWRNVKEISLELEEKEW 1118
+ V+F+ RAL LH+GPI KF+LS SYLQ CPDIDQWILFLS ++KE+ LEL E EW
Sbjct: 66 VENCMVNFITRALFLHQGPIHKFQLSTSYLQCCPDIDQWILFLSRSDIKELVLELGEGEW 125
Query: 1117 YKVPSCLFSCQYLTHLELFRCEVHPPPTFKGFSNLKSLNFQQSYFENGVVESILSSCPIL 938
++VPSCLF+C+ LT LELFRCE PPPTFKGF L+SL+ Q +ES++S CP+L
Sbjct: 126 FRVPSCLFNCKKLTCLELFRCEFDPPPTFKGFLCLRSLSLHQVLVAPEAIESLISGCPLL 185
Query: 937 ESFTLTYFDTLSMNICAPNLKYLRLEGEFKDICLENTPLLETICIALYMTEEIADHLEAS 758
ES L+YFD+L++NI APNLKYL LEGEF DICLENTPLL + +A+YM +E+A+ E S
Sbjct: 186 ESLALSYFDSLALNIRAPNLKYLCLEGEFTDICLENTPLLVAMSVAMYMNDEMAECFEQS 245
Query: 757 TTCNLIKALGNVPALERLVAESYFVKYLSVKSVPSRXXXXXXXXXXXXXYQVGFEDVNEI 578
+ CN IK LG VP LERL YF KYLS+ P YQV FED+ EI
Sbjct: 246 SKCNFIKFLGGVPRLERLAGHIYFTKYLSIGDYPGSLAITYSHLKIIELYQVSFEDMKEI 305
Query: 577 SVAICLLVYSPNLEELLFSASSDNEACI-GPDMDYWDKQHPLNCSFKRLQIVSMTDMSGV 401
V + L++ SPNL+EL S SS A + P++++W K+ P +C+FK+L++V MTDMSGV
Sbjct: 306 RVVLRLIMNSPNLKELRISGSSTAVASVEAPNLEFWAKECPKDCTFKQLKVVKMTDMSGV 365
Query: 400 PDEMEFTKFLLAKSPVLKTMSIKSSTYLTVEGAWDMLIELLGFPRASPQARIIY 239
P EMEF KFLLA SPVL+TMSI Y+ ++G +MLI+L+ F RAS +A II+
Sbjct: 366 PHEMEFMKFLLANSPVLETMSITPCVYV-MDGRLNMLIQLVRFRRASAEAEIIF 418
>ref|XP_002270150.2| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Vitis
vinifera]
Length = 414
Score = 441 bits (1133), Expect = e-121
Identities = 228/424 (53%), Positives = 294/424 (69%), Gaps = 5/424 (1%)
Frame = -2
Query: 1486 DMAP--DIISNLPLNVIEGILMCLPLRDAVRTSILSRKWRYRWTTIPQLVFDDTCVPITS 1313
D AP D+ISNLPL++IE IL+ LP+R+AVRTSILS KWRYRW+ I LVF+D
Sbjct: 2 DDAPKLDLISNLPLSIIESILVRLPIREAVRTSILSSKWRYRWSGITDLVFED------- 54
Query: 1312 SSLAVTKTKFVSFVDRALLLHRGPIQKFKLSISYLQSCPDIDQWILFLSWRNVKEISLEL 1133
L + K F+ + LLLH GPI KF+++ S L+ CPDIDQWILFLS +VKEI LEL
Sbjct: 55 -DLFLLNDKLKKFITQVLLLHAGPIHKFQITTSNLRICPDIDQWILFLSRNDVKEILLEL 113
Query: 1132 EEKEWYKVPSCLFSCQYLTHLELFRCEVHPPPTFKGFSNLKSLNFQQSYFENGVVESILS 953
E EW+ VPSCLFSCQ LT LEL RCE+HPPPTFKGF +LK LN Q ++S++S
Sbjct: 114 GECEWFTVPSCLFSCQKLTRLELVRCELHPPPTFKGFLHLKILNLHQVSITCEAIQSLVS 173
Query: 952 SCPILESFTLTYFDTLSMNICAPNLKYLRLEGEFKDICLENTPLLETICIALYMTEEIAD 773
SCP+LE +L+YFD+L++NI APNLKYL LEGEFK+ICLENTP L ++ +A+YM++++ +
Sbjct: 174 SCPLLECLSLSYFDSLALNISAPNLKYLFLEGEFKEICLENTPGLVSVTVAMYMSDDVVE 233
Query: 772 HLEASTTCNLIKALGNVPALERLVAESYFVKYLSVKSVPSRXXXXXXXXXXXXXYQVGFE 593
H E S++CN IK G P LERL+ YF K+LS+ + R YQV FE
Sbjct: 234 HFEQSSSCNFIKFFGGAPHLERLIGHIYFTKFLSIGNELGRHPITYHHLKNIELYQVSFE 293
Query: 592 DVNEISVAICLLVYSPNLEELLFSASSDNEACIGP---DMDYWDKQHPLNCSFKRLQIVS 422
D+ EI V + L++YSPNLEEL S SS+ + P D+D+W+ + PL+C+FK LQ V
Sbjct: 294 DIKEILVILRLIIYSPNLEELQISGSSNTS--VSPEVLDLDFWENECPLDCAFKCLQTVK 351
Query: 421 MTDMSGVPDEMEFTKFLLAKSPVLKTMSIKSSTYLTVEGAWDMLIELLGFPRASPQARII 242
MTD+SG+P EM F KFLL SP+L+ MSI S Y +EG M+ ELL F R SPQA+I
Sbjct: 352 MTDISGLPHEMRFIKFLLENSPILEIMSITPSVY-AIEGRMHMVTELLEFRRVSPQAKIK 410
Query: 241 YIQD 230
++ D
Sbjct: 411 FVLD 414
>ref|XP_004135131.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Cucumis
sativus]
Length = 418
Score = 422 bits (1085), Expect = e-115
Identities = 216/422 (51%), Positives = 290/422 (68%), Gaps = 1/422 (0%)
Frame = -2
Query: 1492 GSDMAPDIISNLPLNVIEGILMCLPLRDAVRTSILSRKWRYRWTTIPQLVFDDTCVPITS 1313
G + D +S+LP ++IE IL LP+RDA+RTSILSR+WRY+WTT+ QLVFDD CV +++
Sbjct: 2 GDVLGVDHLSDLPQSIIECILTRLPIRDAIRTSILSRRWRYKWTTLTQLVFDDDCVAMSN 61
Query: 1312 SSLAVTKTKFVSFVDRALLLHRGPIQKFKLSISYLQSCPDIDQWILFLSWRNVKEISLEL 1133
+ + F+ L LH GPI KF LS +YLQ+ PD+DQW+LFLS + ++E+ +EL
Sbjct: 62 DGIY---EDLIYFITHVLFLHEGPIHKFHLSATYLQNTPDLDQWLLFLSRKGIRELIIEL 118
Query: 1132 EEKEWYKVPSCLFSCQYLTHLELFRCEVHPPPTFKGFSNLKSLNFQQSYFENGVVESILS 953
+ EW++V SCLF+C LT LEL+RCE+ PPPTFKGF LKSL Q +ES++S
Sbjct: 119 GDGEWFRVHSCLFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQVLIAPEDIESLIS 178
Query: 952 SCPILESFTLTYFDTLSMNICAPNLKYLRLEGEFKDICLENTPLLETICIALYMTEEIAD 773
+CP+LES L+YFD+L +NICAPNLKYL LEGEF+DICL+NTPLL +I +ALYM +E ++
Sbjct: 179 NCPLLESLALSYFDSLVLNICAPNLKYLYLEGEFRDICLQNTPLLVSISVALYMNDE-SE 237
Query: 772 HLEASTTCNLIKALGNVPALERLVAESYFVKYLSVKSVPSRXXXXXXXXXXXXXYQVGFE 593
+ CN K LG VP LE+L YF KYLS+ + + +QV FE
Sbjct: 238 PFGDLSDCNYEKFLGGVPYLEKLTGHVYFTKYLSIGNSARKMPISYIYLKSIELHQVSFE 297
Query: 592 DVNEISVAICLLVYSPNLEELLFSASSDNEACI-GPDMDYWDKQHPLNCSFKRLQIVSMT 416
D+NEI V + L+ SPNLEEL S SS+ A PD+D+W+ + P N +F +L++V T
Sbjct: 298 DMNEILVVLRLITSSPNLEELQISGSSNPVAASEAPDLDFWENECPSNLTFGKLRVVKAT 357
Query: 415 DMSGVPDEMEFTKFLLAKSPVLKTMSIKSSTYLTVEGAWDMLIELLGFPRASPQARIIYI 236
DMSGVP EMEF K+LL PVL+ MSI+ Y+T + +MLIELL F RASP+A I++I
Sbjct: 358 DMSGVPHEMEFIKYLLRNCPVLEIMSIRPCVYVT-DRRLNMLIELLKFRRASPEAEILFI 416
Query: 235 QD 230
Q+
Sbjct: 417 QE 418
>ref|XP_004155285.1| PREDICTED: LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein
At1g13570-like [Cucumis sativus]
Length = 418
Score = 422 bits (1084), Expect = e-115
Identities = 216/422 (51%), Positives = 290/422 (68%), Gaps = 1/422 (0%)
Frame = -2
Query: 1492 GSDMAPDIISNLPLNVIEGILMCLPLRDAVRTSILSRKWRYRWTTIPQLVFDDTCVPITS 1313
G + D +S+LP ++IE IL LP+RDA+RTSILSR+WRY+WTT+ QLVFDD CV +++
Sbjct: 2 GDVLGVDHLSDLPQSIIECILTRLPIRDAIRTSILSRRWRYKWTTLTQLVFDDDCVAMSN 61
Query: 1312 SSLAVTKTKFVSFVDRALLLHRGPIQKFKLSISYLQSCPDIDQWILFLSWRNVKEISLEL 1133
+ + F+ L LH GPI KF LS +YLQ+ PD+DQW+LFLS + ++E+ +EL
Sbjct: 62 DGIY---EDLIYFITHVLXLHEGPIHKFHLSATYLQNTPDLDQWLLFLSRKGIRELIIEL 118
Query: 1132 EEKEWYKVPSCLFSCQYLTHLELFRCEVHPPPTFKGFSNLKSLNFQQSYFENGVVESILS 953
+ EW++V SCLF+C LT LEL+RCE+ PPPTFKGF LKSL Q +ES++S
Sbjct: 119 GDGEWFRVHSCLFNCSKLTLLELYRCELDPPPTFKGFLCLKSLKLHQVLIAPEDIESLIS 178
Query: 952 SCPILESFTLTYFDTLSMNICAPNLKYLRLEGEFKDICLENTPLLETICIALYMTEEIAD 773
+CP+LES L+YFD+L +NICAPNLKYL LEGEF+DICL+NTPLL +I +ALYM +E ++
Sbjct: 179 NCPLLESLALSYFDSLVLNICAPNLKYLYLEGEFRDICLQNTPLLVSISVALYMNDE-SE 237
Query: 772 HLEASTTCNLIKALGNVPALERLVAESYFVKYLSVKSVPSRXXXXXXXXXXXXXYQVGFE 593
+ CN K LG VP LE+L YF KYLS+ + + +QV FE
Sbjct: 238 PFGDLSDCNYEKFLGGVPYLEKLTGHVYFTKYLSIGNSARKMPISYIYLKSIELHQVSFE 297
Query: 592 DVNEISVAICLLVYSPNLEELLFSASSDNEACI-GPDMDYWDKQHPLNCSFKRLQIVSMT 416
D+NEI V + L+ SPNLEEL S SS+ A PD+D+W+ + P N +F +L++V T
Sbjct: 298 DMNEILVVLRLITSSPNLEELQISGSSNPVAASEAPDLDFWENECPSNLTFGKLRVVKAT 357
Query: 415 DMSGVPDEMEFTKFLLAKSPVLKTMSIKSSTYLTVEGAWDMLIELLGFPRASPQARIIYI 236
DMSGVP EMEF K+LL PVL+ MSI+ Y+T + +MLIELL F RASP+A I++I
Sbjct: 358 DMSGVPHEMEFIKYLLRNCPVLEIMSIRPCVYVT-DRRLNMLIELLKFRRASPEAEILFI 416
Query: 235 QD 230
Q+
Sbjct: 417 QE 418