BLASTX nr result

ID: Coptis21_contig00018381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018381
         (1438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514810.1| ATP binding protein, putative [Ricinus commu...   379   e-116
ref|XP_002315119.1| dicer-like protein [Populus trichocarpa] gi|...   365   e-110
ref|XP_004139098.1| PREDICTED: endoribonuclease Dicer homolog 2-...   348   e-104
ref|XP_003534774.1| PREDICTED: endoribonuclease Dicer homolog 2-...   335   e-102
ref|XP_003535104.1| PREDICTED: endoribonuclease Dicer homolog 2-...   333   e-100

>ref|XP_002514810.1| ATP binding protein, putative [Ricinus communis]
            gi|223545861|gb|EEF47364.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 1388

 Score =  379 bits (974), Expect(2) = e-116
 Identities = 200/399 (50%), Positives = 270/399 (67%), Gaps = 7/399 (1%)
 Frame = -3

Query: 1436 LSPERVSVATKFQVALLRLLINQKWNRFADALDKHQQNDTVPRISYLLLPSTNADGKSLT 1257
            L+PE V +  KF + +L++L++   ++  D L K  +    P I YLLLP   +  K  +
Sbjct: 725  LTPETVIMCRKFLITVLKVLVDHSIDKLEDIL-KGLKLRNGPEIDYLLLPLVGSCQKP-S 782

Query: 1256 IHWDCISSLF-----TLNWHRSHCPEKSCLNYVHTKDKEICRGMLMNSLVVTPHNGYVYC 1092
            I WD ++S+       L  H++ CP K     + TKD  +C+  L NS+V TPHNG VY 
Sbjct: 783  IDWDAVTSVLFSYENVLEDHKN-CPLKEAACVIQTKDGVVCKCTLQNSVVYTPHNGKVYF 841

Query: 1091 ISGFLDGLDGNSVMKSK-GKALRYKEYYQSKHGIKLRHEGQTLLRGRHVFTVQNCLRRQS 915
            I G LD L+G+S+++ + G    Y EYY+ +HGIKL  + Q LLRGRH+F +QN L R  
Sbjct: 842  IDGTLDHLNGHSLLELRNGYHKSYMEYYKDQHGIKLHFDQQLLLRGRHIFPLQNYLNRCR 901

Query: 914  NPKEKESTAAYVELPPELCKIIMSCISLGTLKSYSLVPSIMHRIESIVLALHLKKLQTGH 735
              KEK+S  AYVELPPELC I MS IS+ +  S++ VPSIMHR+ES+++A +LKKL   H
Sbjct: 902  QQKEKDSQNAYVELPPELCHIFMSPISISSFYSFTFVPSIMHRLESLLIASNLKKLHLDH 961

Query: 734  LISNIQIPTMKILEAITTKKCQEEFSLESLETLGDSFLKYAVGQQLFKRNKNHHEGLLSG 555
             + ++ IPT+K+LEAITTKKCQE+F LESLETLGDSFLKYAVGQQLFK  +NHHEGLLS 
Sbjct: 962  CMQSVAIPTIKVLEAITTKKCQEKFHLESLETLGDSFLKYAVGQQLFKTYQNHHEGLLSI 1021

Query: 554  HRQRMVSNSALCKLGCKRKLQGFVRYECFDPKCWVVPGDL-GLSGLVEASFSTSGQLYVM 378
             + +++SN+ LC+LGC  K+ GF+R E FDPK W++P ++ G   L E   S   ++Y+ 
Sbjct: 1022 KKDKLISNATLCRLGCDSKIPGFIRNESFDPKNWLIPDEISGCYSLSEEILSNGRKMYIK 1081

Query: 377  GSRHMKTKVIADVVEGLIGAYLTAGGEPAAFHFLDWLGL 261
              R +K K+IADVVE LIGAYL+ GGE A   FLDW+G+
Sbjct: 1082 RRRKLKEKMIADVVEALIGAYLSTGGEIAGLLFLDWIGI 1120



 Score = 65.9 bits (159), Expect(2) = e-116
 Identities = 30/47 (63%), Positives = 35/47 (74%)
 Frame = -2

Query: 141  FAMQPERHINVVELESLLDYRFRDHSLLLEALTHGSYQLQGISRCYQ 1
            F M PE+++N+  LESLL Y FRD  LL+EALTHGSY L  I RCYQ
Sbjct: 1133 FEMNPEKYVNICHLESLLKYSFRDPCLLVEALTHGSYMLPEIPRCYQ 1179


>ref|XP_002315119.1| dicer-like protein [Populus trichocarpa] gi|222864159|gb|EEF01290.1|
            dicer-like protein [Populus trichocarpa]
          Length = 1408

 Score =  365 bits (938), Expect(2) = e-110
 Identities = 191/392 (48%), Positives = 267/392 (68%), Gaps = 5/392 (1%)
 Frame = -3

Query: 1421 VSVATKFQVALLRLLINQKWNRFADALDKHQQNDTVPRISYLLLPSTNADGKSLTIHWDC 1242
            V +  +FQ+ L  +LI+++ N+  + L K  +  T   + Y LLP+  +  +  +I W+ 
Sbjct: 743  VLLCRRFQITLFEVLIHREVNKLEEVL-KGLELGTGVVMDYFLLPAIRSRSQP-SIDWEP 800

Query: 1241 ISSLFTLNWHRSH--CPEKSCLNYVHTKDKEICRGMLMNSLVVTPHNGYVYCISGFLDGL 1068
            ISS+     +  H  C  K   + VHTK   +C  +L NSLV TPHNG VY I+G  + L
Sbjct: 801  ISSVLFSYKNEDHFNCSSKGNAHVVHTKGGPVCTCVLQNSLVCTPHNGNVYFITGASEDL 860

Query: 1067 DGNSVMKSK-GKALRYKEYY-QSKHGIKLRHEGQTLLRGRHVFTVQNCLRRQSNPKEKES 894
            +G S++K + G A+ YKE++ + ++ I+L  + + LL GRH+F V N L R    KEKES
Sbjct: 861  NGRSLLKLRNGSAITYKEHFAKRRNSIQLLFDQEPLLEGRHIFPVHNFLNRCRTKKEKES 920

Query: 893  TAAYVELPPELCKIIMSCISLGTLKSYSLVPSIMHRIESIVLALHLKKLQTGHLISNIQI 714
              A+V+LPPELC II+S +S+ TL SY+ +PSIMHR+ES+++A++LKK+ + H + N+ I
Sbjct: 921  KNAHVDLPPELCDIILSPVSISTLYSYTFIPSIMHRLESLLIAVNLKKMHSDHCMQNVDI 980

Query: 713  PTMKILEAITTKKCQEEFSLESLETLGDSFLKYAVGQQLFKRNKNHHEGLLSGHRQRMVS 534
            P MK+LEAITTKKCQE+F LESLETLGDSFLKYA  QQLFK  +NHHEGLLS  +++++S
Sbjct: 981  PAMKVLEAITTKKCQEKFHLESLETLGDSFLKYAASQQLFKLYQNHHEGLLSMKKEKIIS 1040

Query: 533  NSALCKLGCKRKLQGFVRYECFDPKCWVVPGD-LGLSGLVEASFSTSGQLYVMGSRHMKT 357
            N+ALC+ GC  KL GF+R E FDPK W++PGD  G   L E   S   ++YV G R +K+
Sbjct: 1041 NAALCRRGCDHKLPGFIRNESFDPKLWMIPGDKCGSDLLSEEPLSECRKIYVRGRRKVKS 1100

Query: 356  KVIADVVEGLIGAYLTAGGEPAAFHFLDWLGL 261
            K +ADVVE LIGAYL+ GGE  A  F+DW+G+
Sbjct: 1101 KTVADVVEALIGAYLSTGGEVLALFFMDWIGI 1132



 Score = 61.6 bits (148), Expect(2) = e-110
 Identities = 30/47 (63%), Positives = 35/47 (74%)
 Frame = -2

Query: 141  FAMQPERHINVVELESLLDYRFRDHSLLLEALTHGSYQLQGISRCYQ 1
            F +Q E+ +NV  LESLL+Y FRD SLL+EALTHGSY L  I  CYQ
Sbjct: 1145 FQLQAEKFVNVRYLESLLNYSFRDPSLLVEALTHGSYMLPEIPSCYQ 1191


>ref|XP_004139098.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Cucumis sativus]
          Length = 1393

 Score =  348 bits (894), Expect(2) = e-104
 Identities = 196/404 (48%), Positives = 265/404 (65%), Gaps = 12/404 (2%)
 Frame = -3

Query: 1436 LSPERVSVATKFQVALLRLLINQKWNRFADALDKHQQNDTV-----PRISYLLLPSTNAD 1272
            LSPE+V ++ +FQ  + ++L+N  W       +K  +N+ +     PR+ YLLLPST  +
Sbjct: 731  LSPEQVLLSRQFQRTIFKVLLNHTWT------NKLSENNEICLGDGPRVDYLLLPSTGGE 784

Query: 1271 GKSLTIHWDCISSLFTLNW----HRSHCPEKSCLNYVHTKDKEICRGMLMNSLVVTPHNG 1104
                 I W+ + S+   +     HR     K     V TK   +C   L NS+V TPHNG
Sbjct: 785  ----LISWEIVLSVLVSSQEYCVHRGISSSKDVSYDVPTKSGLVCICRLQNSVVYTPHNG 840

Query: 1103 YVYCISGFLDGLDGNSVMK-SKGKALRYKEYYQSKHGIKLRHEGQTLLRGRHVFTVQNCL 927
            +VYCI+  L  L+GNS++K  K + + YKEYY+ +HGI LR E Q LLRG+ +F V N +
Sbjct: 841  HVYCITSVLSELNGNSLLKIRKNEMMAYKEYYKVRHGIDLRFEKQPLLRGKKIFPVHNYI 900

Query: 926  RRQSNPKEK-ESTAAYVELPPELCKIIMSCISLGTLKSYSLVPSIMHRIESIVLALHLKK 750
            +R    KE+ ES  + VELPPELC IIMS IS+ TL SYS +P IMHR+ES+++A +LKK
Sbjct: 901  KRFRKHKEQGESRNSLVELPPELCSIIMSPISVNTLYSYSFLPFIMHRLESMLIASNLKK 960

Query: 749  LQTGHLISNIQIPTMKILEAITTKKCQEEFSLESLETLGDSFLKYAVGQQLFKRNKNHHE 570
            L + H + N  IPT K+LEAITTKKCQE+F+LESLETLGDSFLKYA GQ LF+  +N HE
Sbjct: 961  LNSDHCMQN-DIPTTKVLEAITTKKCQEKFNLESLETLGDSFLKYATGQHLFRTFQNDHE 1019

Query: 569  GLLSGHRQRMVSNSALCKLGCKRKLQGFVRYECFDPKCWVVPGDL-GLSGLVEASFSTSG 393
            GLL+  + R+VSN+AL + GC+ K+ GF+R E FDP+ W +PGD   +  L E    +  
Sbjct: 1020 GLLTLKKDRIVSNAALRRRGCEHKISGFIRDEAFDPQNWDIPGDTHEVYQLREEVLFSGR 1079

Query: 392  QLYVMGSRHMKTKVIADVVEGLIGAYLTAGGEPAAFHFLDWLGL 261
            ++YV   R +K+K IADVVE LIGAYL+ GGE AA  FL+ +G+
Sbjct: 1080 KVYVQRKRKIKSKRIADVVEALIGAYLSTGGEKAAMQFLNRIGI 1123



 Score = 58.2 bits (139), Expect(2) = e-104
 Identities = 29/47 (61%), Positives = 32/47 (68%)
 Frame = -2

Query: 141  FAMQPERHINVVELESLLDYRFRDHSLLLEALTHGSYQLQGISRCYQ 1
            F +   + INV  LESLL Y F D SLLLEA+THGSY L  I RCYQ
Sbjct: 1136 FRVDVHKLINVGHLESLLKYTFNDRSLLLEAMTHGSYMLPEIPRCYQ 1182


>ref|XP_003534774.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
          Length = 1421

 Score =  335 bits (860), Expect(2) = e-102
 Identities = 188/400 (47%), Positives = 251/400 (62%), Gaps = 8/400 (2%)
 Frame = -3

Query: 1436 LSPERVSVATKFQVALLRLLINQKWNRFADALDKHQQNDTVPRISYLLLPSTNADGKSLT 1257
            LSP  V +  KFQV LL  +I+   N+ A +LDK    D V  I YLLLP+     KS  
Sbjct: 769  LSPNLVLLCKKFQVTLLGSIIDHSMNKLATSLDKCYLEDNV-EIDYLLLPAIGKGEKS-H 826

Query: 1256 IHWDCISSL----FTLNWHRSHCPEKSCLNYVHTKDKEICRGMLMNSLVVTPHNG---YV 1098
            ++W  I S+    FT  +H+ H         + TK   +C   L ++LV T H G   Y 
Sbjct: 827  VNWLAIKSVEPSSFTCKYHQPH---------IETKSGLVCTCKLQDALVCTSHPGGKIYF 877

Query: 1097 YCISGFLDGLDGNSVMKSKG-KALRYKEYYQSKHGIKLRHEGQTLLRGRHVFTVQNCLRR 921
            Y  +G ++ L GNS M+ +G +   YK+YY+  HGI+L+ E Q LL+ RH F V+N    
Sbjct: 878  YITTGIME-LHGNSPMELRGGEVTTYKKYYEQHHGIQLQFENQWLLKARHHFKVKNYCHG 936

Query: 920  QSNPKEKESTAAYVELPPELCKIIMSCISLGTLKSYSLVPSIMHRIESIVLALHLKKLQT 741
            Q   K+ E++ A+VELPPELC I+MS I    + ++S +PSIMHR+ES++ A +LKK+  
Sbjct: 937  QKQGKDGEASKAFVELPPELCSIVMSPIKDSIIYTFSFIPSIMHRLESLLGAFNLKKMHL 996

Query: 740  GHLISNIQIPTMKILEAITTKKCQEEFSLESLETLGDSFLKYAVGQQLFKRNKNHHEGLL 561
             H   N +I T+K+LEAITTK+C E F  ESLETLGDSFLKYA  QQLFK  KNHHEGLL
Sbjct: 997  DHCTQN-EIQTIKVLEAITTKRCNEAFHYESLETLGDSFLKYAASQQLFKTYKNHHEGLL 1055

Query: 560  SGHRQRMVSNSALCKLGCKRKLQGFVRYECFDPKCWVVPGDLGLSGLVEASFSTSGQLYV 381
            S  R++++SN+ALCKLGC   L GF+R E FDP  W +PGD   S  +E       ++YV
Sbjct: 1056 SVKREKIISNAALCKLGCSSGLPGFIRNEPFDPHAWTIPGDKPESLKLEELVIKGKKIYV 1115

Query: 380  MGSRHMKTKVIADVVEGLIGAYLTAGGEPAAFHFLDWLGL 261
             G R +  K+IADVVE LIGA+L+ GGE +A  F+DW+G+
Sbjct: 1116 HGKRKLNRKIIADVVEALIGAFLSTGGEISALLFMDWVGI 1155



 Score = 63.2 bits (152), Expect(2) = e-102
 Identities = 30/47 (63%), Positives = 35/47 (74%)
 Frame = -2

Query: 141  FAMQPERHINVVELESLLDYRFRDHSLLLEALTHGSYQLQGISRCYQ 1
            F +QPE+ +NV  LES L Y F DHSLL+EALTHGSY L  + RCYQ
Sbjct: 1168 FDIQPEKLLNVRFLESQLKYSFHDHSLLVEALTHGSYMLPEVPRCYQ 1214


>ref|XP_003535104.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
          Length = 1414

 Score =  333 bits (854), Expect(2) = e-100
 Identities = 185/400 (46%), Positives = 254/400 (63%), Gaps = 8/400 (2%)
 Frame = -3

Query: 1436 LSPERVSVATKFQVALLRLLINQKWNRFADALDKHQQNDTVPRISYLLLPSTNADGKSLT 1257
            LSP++V +  KFQV +LR+LI+   N+    LD+    D +  I YLLLP+    GK   
Sbjct: 736  LSPDQVLLCKKFQVTILRILIDHDMNKLTAGLDRCYLEDDL-EIDYLLLPAMGK-GKYTA 793

Query: 1256 IHWDCISSL----FTLNWHRSHCPEKSCLNYVHTKDKEICRGMLMNSLVVTPHN-GYV-- 1098
            I+W  ++S+     +  +H  H         + TK   +C   L N+LV T H  G +  
Sbjct: 794  INWLAVNSVNPSEVSCKYHEPH---------IRTKSGLVCSCKLQNALVCTSHPIGKISF 844

Query: 1097 YCISGFLDGLDGNSVMKSKGKALR-YKEYYQSKHGIKLRHEGQTLLRGRHVFTVQNCLRR 921
            Y  +G ++ LDGNS M+ +G  +  YK+YY+  HGI+L+ E Q LL+ RH+F V+N    
Sbjct: 845  YIATGTME-LDGNSPMELRGGGVTTYKKYYEQHHGIQLQFEHQRLLKARHIFQVKNHCHG 903

Query: 920  QSNPKEKESTAAYVELPPELCKIIMSCISLGTLKSYSLVPSIMHRIESIVLALHLKKLQT 741
            +   KE E + A+VELPPELC I+M  IS   + SYS +PSIMHR ES++ A +LKK+  
Sbjct: 904  RKQGKEGEVSKAFVELPPELCSIVMMPISDSLIYSYSFIPSIMHRFESLLGAFNLKKMHL 963

Query: 740  GHLISNIQIPTMKILEAITTKKCQEEFSLESLETLGDSFLKYAVGQQLFKRNKNHHEGLL 561
             H   N +I T+K+LEAITTK+C+E F  ESLETLGDSFLKYA  QQLFK   NHHEGLL
Sbjct: 964  DHCARN-EIQTIKVLEAITTKRCKEAFHYESLETLGDSFLKYAASQQLFKTYHNHHEGLL 1022

Query: 560  SGHRQRMVSNSALCKLGCKRKLQGFVRYECFDPKCWVVPGDLGLSGLVEASFSTSGQLYV 381
            S  R++++SN+ALCKLGC   L GF+R E FDP  W++PGD   S  ++   +    +YV
Sbjct: 1023 SLKREKIISNAALCKLGCSSGLPGFIRNEPFDPNTWIIPGDKPRSFKLKELVAKGKTIYV 1082

Query: 380  MGSRHMKTKVIADVVEGLIGAYLTAGGEPAAFHFLDWLGL 261
             G R ++ K++ADVVE LIGA+L+ GGE AA  F+DW+G+
Sbjct: 1083 SGKRKLRQKIVADVVEALIGAFLSTGGEKAALLFMDWVGI 1122



 Score = 60.5 bits (145), Expect(2) = e-100
 Identities = 28/47 (59%), Positives = 35/47 (74%)
 Frame = -2

Query: 141  FAMQPERHINVVELESLLDYRFRDHSLLLEALTHGSYQLQGISRCYQ 1
            F +QPE+ +NV  LES L+Y F D SLL+EA+THGSY L  + RCYQ
Sbjct: 1135 FDIQPEKLVNVSFLESQLNYSFHDRSLLVEAVTHGSYMLPEVPRCYQ 1181


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