BLASTX nr result

ID: Coptis21_contig00018377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018377
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317027.1| predicted protein [Populus trichocarpa] gi|2...   115   5e-24
ref|XP_002300542.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23
ref|XP_004164611.1| PREDICTED: LOW QUALITY PROTEIN: serine/threo...    99   3e-19
ref|XP_004146184.1| PREDICTED: serine/threonine-protein phosphat...    99   3e-19
ref|XP_002528524.1| protein phosphatase-7, putative [Ricinus com...    99   5e-19

>ref|XP_002317027.1| predicted protein [Populus trichocarpa] gi|222860092|gb|EEE97639.1|
           predicted protein [Populus trichocarpa]
          Length = 291

 Score =  115 bits (287), Expect = 5e-24
 Identities = 51/67 (76%), Positives = 58/67 (86%)
 Frame = +3

Query: 153 SWPSDGKLSLDWIQHLISTFDWSSRNLSPSQFQSVLPVPVFDALLLTASKILHKEPNCVT 332
           SWP+D  L+LDWIQ+LIS FDWSS+NLSPS+   VLPVPVFD L+LTASKILHKEPNCV 
Sbjct: 3   SWPADSSLTLDWIQNLISAFDWSSKNLSPSELPLVLPVPVFDTLVLTASKILHKEPNCVR 62

Query: 333 IDDCGDN 353
           ID+C DN
Sbjct: 63  IDECNDN 69


>ref|XP_002300542.1| predicted protein [Populus trichocarpa] gi|222847800|gb|EEE85347.1|
           predicted protein [Populus trichocarpa]
          Length = 291

 Score =  112 bits (279), Expect = 4e-23
 Identities = 50/67 (74%), Positives = 58/67 (86%)
 Frame = +3

Query: 153 SWPSDGKLSLDWIQHLISTFDWSSRNLSPSQFQSVLPVPVFDALLLTASKILHKEPNCVT 332
           SWPS+  ++LDWIQ+LIS FDWSS+NL PS+  SVLPV VFDAL+LTASKILHKEPNCV 
Sbjct: 3   SWPSNSSVTLDWIQNLISAFDWSSKNLPPSELPSVLPVSVFDALVLTASKILHKEPNCVR 62

Query: 333 IDDCGDN 353
           IDDC +N
Sbjct: 63  IDDCNEN 69


>ref|XP_004164611.1| PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein
           phosphatase 7-like [Cucumis sativus]
          Length = 476

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 45/61 (73%), Positives = 49/61 (80%)
 Frame = +3

Query: 153 SWPSDGKLSLDWIQHLISTFDWSSRNLSPSQFQSVLPVPVFDALLLTASKILHKEPNCVT 332
           SWP D  LSL WI HLI+ FDWSS+NL PS F SVLPV VFD L+LTASKILHKEPNC+ 
Sbjct: 64  SWPPDATLSLQWIHHLIAAFDWSSKNLPPSHFPSVLPVSVFDTLILTASKILHKEPNCLK 123

Query: 333 I 335
           I
Sbjct: 124 I 124


>ref|XP_004146184.1| PREDICTED: serine/threonine-protein phosphatase 7-like [Cucumis
           sativus]
          Length = 465

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 45/61 (73%), Positives = 49/61 (80%)
 Frame = +3

Query: 153 SWPSDGKLSLDWIQHLISTFDWSSRNLSPSQFQSVLPVPVFDALLLTASKILHKEPNCVT 332
           SWP D  LSL WI HLI+ FDWSS+NL PS F SVLPV VFD L+LTASKILHKEPNC+ 
Sbjct: 64  SWPPDATLSLQWIHHLIAAFDWSSKNLPPSHFPSVLPVSVFDTLILTASKILHKEPNCLK 123

Query: 333 I 335
           I
Sbjct: 124 I 124


>ref|XP_002528524.1| protein phosphatase-7, putative [Ricinus communis]
           gi|223532026|gb|EEF33836.1| protein phosphatase-7,
           putative [Ricinus communis]
          Length = 166

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 43/64 (67%), Positives = 51/64 (79%)
 Frame = +3

Query: 153 SWPSDGKLSLDWIQHLISTFDWSSRNLSPSQFQSVLPVPVFDALLLTASKILHKEPNCVT 332
           SWPSDGKLSLDWI+   +  +WSSRN+ PS    VLPV V D+L+LTASKILHKEPNCV 
Sbjct: 39  SWPSDGKLSLDWIKDFSAALEWSSRNVGPSDLDGVLPVAVLDSLILTASKILHKEPNCVR 98

Query: 333 IDDC 344
           I++C
Sbjct: 99  IEEC 102


Top