BLASTX nr result

ID: Coptis21_contig00018364 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018364
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24552.3| unnamed protein product [Vitis vinifera]              160   8e-38
ref|XP_002265587.1| PREDICTED: mitochondrial intermediate peptid...   160   8e-38
ref|XP_002321840.1| predicted protein [Populus trichocarpa] gi|2...   157   1e-36
ref|XP_003523867.1| PREDICTED: mitochondrial intermediate peptid...   156   1e-36
dbj|BAK06873.1| predicted protein [Hordeum vulgare subsp. vulgare]    151   6e-35

>emb|CBI24552.3| unnamed protein product [Vitis vinifera]
          Length = 551

 Score =  160 bits (406), Expect = 8e-38
 Identities = 86/142 (60%), Positives = 103/142 (72%)
 Frame = -2

Query: 432 KMQTLFRRRVSVFISKQNFLVRNNHFVTSNARDISEETGLYGFKLLKSPKCFQRFVDEAI 253
           KM TL RR  S    +      N   + S+    S   GLYGF LLK+PK FQRFVDEAI
Sbjct: 52  KMLTLVRRAASSLCLRFLHNQCNLERIGSHRLHTS---GLYGFDLLKTPKGFQRFVDEAI 108

Query: 252 ARSTELVSYVSNLPPSMETIKTMDEISDTVCSVVDSAQLCRCTHPDREFVEEATKASMRI 73
            RS+ELV+Y+S +P S E ++ MDEISD VCSVVDSA+LCR THPDREFVEEA KASMRI
Sbjct: 109 ERSSELVTYISGMPSSAEIVRAMDEISDAVCSVVDSAELCRHTHPDREFVEEANKASMRI 168

Query: 72  NEYLSFLNTNHNLYSALLRADE 7
           NEYL +LNTNH+LY A+L+ ++
Sbjct: 169 NEYLHYLNTNHSLYHAVLKVEK 190


>ref|XP_002265587.1| PREDICTED: mitochondrial intermediate peptidase [Vitis vinifera]
          Length = 771

 Score =  160 bits (406), Expect = 8e-38
 Identities = 86/142 (60%), Positives = 103/142 (72%)
 Frame = -2

Query: 432 KMQTLFRRRVSVFISKQNFLVRNNHFVTSNARDISEETGLYGFKLLKSPKCFQRFVDEAI 253
           KM TL RR  S    +      N   + S+    S   GLYGF LLK+PK FQRFVDEAI
Sbjct: 52  KMLTLVRRAASSLCLRFLHNQCNLERIGSHRLHTS---GLYGFDLLKTPKGFQRFVDEAI 108

Query: 252 ARSTELVSYVSNLPPSMETIKTMDEISDTVCSVVDSAQLCRCTHPDREFVEEATKASMRI 73
            RS+ELV+Y+S +P S E ++ MDEISD VCSVVDSA+LCR THPDREFVEEA KASMRI
Sbjct: 109 ERSSELVTYISGMPSSAEIVRAMDEISDAVCSVVDSAELCRHTHPDREFVEEANKASMRI 168

Query: 72  NEYLSFLNTNHNLYSALLRADE 7
           NEYL +LNTNH+LY A+L+ ++
Sbjct: 169 NEYLHYLNTNHSLYHAVLKVEK 190


>ref|XP_002321840.1| predicted protein [Populus trichocarpa] gi|222868836|gb|EEF05967.1|
           predicted protein [Populus trichocarpa]
          Length = 726

 Score =  157 bits (396), Expect = 1e-36
 Identities = 85/152 (55%), Positives = 104/152 (68%), Gaps = 9/152 (5%)
 Frame = -2

Query: 429 MQTLFRRRVSVFISKQNF------LVRNNH---FVTSNARDISEETGLYGFKLLKSPKCF 277
           M  L RR  +V   K+        LV   H   +V       +  TGLYGF  LK+PK F
Sbjct: 1   MSALIRRYAAVLCHKRMLKPNYPTLVLTCHVSTWVAPQLNGAAATTGLYGFDHLKTPKGF 60

Query: 276 QRFVDEAIARSTELVSYVSNLPPSMETIKTMDEISDTVCSVVDSAQLCRCTHPDREFVEE 97
           QRFVD+AI RS ELV+Y+S++P S E ++ MDEIS+TVC VVDSA+LCR THPDREFVE 
Sbjct: 61  QRFVDDAIERSGELVNYISSMPSSAEVLRAMDEISNTVCCVVDSAELCRNTHPDREFVEA 120

Query: 96  ATKASMRINEYLSFLNTNHNLYSALLRADESG 1
           A KASMRINEYL +LNTNH LY+A+ RA++ G
Sbjct: 121 AGKASMRINEYLHYLNTNHTLYAAVKRAEKDG 152


>ref|XP_003523867.1| PREDICTED: mitochondrial intermediate peptidase-like [Glycine max]
          Length = 711

 Score =  156 bits (395), Expect = 1e-36
 Identities = 82/141 (58%), Positives = 104/141 (73%)
 Frame = -2

Query: 429 MQTLFRRRVSVFISKQNFLVRNNHFVTSNARDISEETGLYGFKLLKSPKCFQRFVDEAIA 250
           M ++  RR S  I +Q   ++ N  +    R  S  TGLYGF  LK+PK FQ FVD+AI 
Sbjct: 1   MWSVVIRRSSWEILRQ---IKRNILLGVAIRTFSTPTGLYGFPHLKTPKGFQPFVDDAIQ 57

Query: 249 RSTELVSYVSNLPPSMETIKTMDEISDTVCSVVDSAQLCRCTHPDREFVEEATKASMRIN 70
           RS EL+SY+ +  P+ E ++ MDEISDTVCSVVDSA+LCR THPDREFVEEATKASM+IN
Sbjct: 58  RSGELISYICSKRPAAEVMRAMDEISDTVCSVVDSAELCRNTHPDREFVEEATKASMKIN 117

Query: 69  EYLSFLNTNHNLYSALLRADE 7
           EYL +LNTNH+LY A+ +A++
Sbjct: 118 EYLHYLNTNHDLYDAVKKAEQ 138


>dbj|BAK06873.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 769

 Score =  151 bits (381), Expect = 6e-35
 Identities = 74/119 (62%), Positives = 96/119 (80%)
 Frame = -2

Query: 357 FVTSNARDISEETGLYGFKLLKSPKCFQRFVDEAIARSTELVSYVSNLPPSMETIKTMDE 178
           F TS  R    ETGLYGF++L++ K F+RFVDEAI RS ELV++++ LPP+ E ++TMDE
Sbjct: 86  FSTSAGRP---ETGLYGFEVLRTAKGFRRFVDEAIQRSDELVAHIAQLPPAAEIVRTMDE 142

Query: 177 ISDTVCSVVDSAQLCRCTHPDREFVEEATKASMRINEYLSFLNTNHNLYSALLRADESG 1
           IS+TVCSV+DSA+LCR THPDREF EEA KASMRI E+L +LNTN  LY+A+++A+  G
Sbjct: 143 ISNTVCSVIDSAELCRNTHPDREFAEEADKASMRIYEHLQYLNTNTTLYNAIVKAESEG 201


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