BLASTX nr result
ID: Coptis21_contig00018334
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00018334
(1969 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268789.1| PREDICTED: WD repeat-containing protein 26 [... 623 e-176
ref|XP_002533626.1| WD-repeat protein, putative [Ricinus communi... 602 e-169
ref|NP_199205.1| transducin/WD40 domain-containing protein [Arab... 588 e-165
ref|XP_003554312.1| PREDICTED: WD repeat-containing protein 26-l... 586 e-165
ref|XP_002865396.1| transducin family protein [Arabidopsis lyrat... 583 e-164
>ref|XP_002268789.1| PREDICTED: WD repeat-containing protein 26 [Vitis vinifera]
Length = 520
Score = 623 bits (1606), Expect = e-176
Identities = 316/518 (61%), Positives = 378/518 (72%), Gaps = 5/518 (0%)
Frame = -3
Query: 1907 LGSKSQINKTEFTRLIISYLYSLGFXXXXXXXXXXXXXXXXXPQLLSLETQILNNSSNFD 1728
LG K I K EF R+II L+SLG+ P+ LE Q+LN +N++
Sbjct: 8 LGPKRLIKKHEFVRIIIQCLHSLGYKNSASCLESESGISHKSPESKLLEMQVLN--ANWE 65
Query: 1727 TCIETIQNFDTLSEQVRSSALFLLFKHIFTEFLNTGDDLSALSILRKRISVLGVDKERVH 1548
I + + L+++ R+SALFL+ + E L+ GDD SAL+ILRKR+S L V +E+VH
Sbjct: 66 DSIGILNGIEDLTDETRASALFLVLQQCLLECLSRGDDSSALTILRKRVSPLKVGREKVH 125
Query: 1547 KLASGIVF-----SGNEDMDSCCSGNEDXXXXXXXXXXXXXXXLFPPHVIVPDRRLECLV 1383
LA+G++ G D S C L PP + +P+ RLE LV
Sbjct: 126 NLAAGMLSLKEMGMGKIDDSSICE--------LRRKSLVELEKLLPPPITLPEGRLEHLV 177
Query: 1382 ERAVLAQRDACVYHNSSNEISLYEDHCCGRDQIPTETLQILDSHEDEVWFVQFSNNGDYL 1203
E A+ AQ D+C+YHNS EISLYEDH CGRDQIPT+T+QIL H+ EVWFVQFS+NG+YL
Sbjct: 178 ETAITAQMDSCIYHNSFREISLYEDHYCGRDQIPTQTVQILTEHKHEVWFVQFSHNGEYL 237
Query: 1202 ASSSSDHTAIIWKVSEEGILSLKHTLRSHQNPVSFVAWSPDDTMLLTCGNGEVLKLWDVE 1023
ASSS D AIIWKV E G+L L+H L+SHQNPVSFVAWSPDDTMLLTCGNGEVLKLWDVE
Sbjct: 238 ASSSRDCAAIIWKVLENGVLILRHMLQSHQNPVSFVAWSPDDTMLLTCGNGEVLKLWDVE 297
Query: 1022 TGTCKHTFGEKSPIVSSCAWLPDSKRLVCGSSDPNKCIYMWDLDGNELEAWRGVRMPKVS 843
TGTCKHTFG+ IVSSCAW PDSKR+VCGSSDP K IYMWD DGNE++AW+G+RMPKV
Sbjct: 298 TGTCKHTFGDHGFIVSSCAWFPDSKRIVCGSSDPEKGIYMWDCDGNEIKAWKGMRMPKVL 357
Query: 842 DLAVTPDGEHLISICSEKDIRIYSFRSKTDRVVKEDHPITSLSVSKNSEFLIVNLNSQEI 663
DLAVTPDGE+LISI SEK+IRI + + + V+ ED+ ITSLSVS++S+FLIVNLNS+EI
Sbjct: 358 DLAVTPDGENLISIFSEKEIRILNVGTNAEHVISEDYSITSLSVSRDSKFLIVNLNSEEI 417
Query: 662 HLWEIVETGNKPLKYTGHKQGKYVIRSCFGGVDCMFIASGSENSQVYIWNRKNQKPLEVL 483
H+W++ KPLKYTGHKQ KYVIRSCFGG C FIASGSENS VYIWNR N PLEVL
Sbjct: 418 HMWDVAGKWEKPLKYTGHKQNKYVIRSCFGGFHCTFIASGSENSLVYIWNRGNSTPLEVL 477
Query: 482 TGHSMTVNCVSWNPTQPQMLASASDDQTIRIWGPSRKK 369
+GH MTVNCVSWNP + QMLASASDD TIRIWGPS+ +
Sbjct: 478 SGHLMTVNCVSWNPRRHQMLASASDDHTIRIWGPSQPR 515
>ref|XP_002533626.1| WD-repeat protein, putative [Ricinus communis]
gi|223526484|gb|EEF28755.1| WD-repeat protein, putative
[Ricinus communis]
Length = 523
Score = 602 bits (1552), Expect = e-169
Identities = 301/513 (58%), Positives = 369/513 (71%)
Frame = -3
Query: 1907 LGSKSQINKTEFTRLIISYLYSLGFXXXXXXXXXXXXXXXXXPQLLSLETQILNNSSNFD 1728
+G+K I + EF R+II L+SLG+ LE+QIL N++
Sbjct: 8 IGTKGLIKRHEFVRVIIQSLWSLGYKKSASCLEIESGISYKSVDFELLESQILEG--NWN 65
Query: 1727 TCIETIQNFDTLSEQVRSSALFLLFKHIFTEFLNTGDDLSALSILRKRISVLGVDKERVH 1548
C+ T+ L ++ R+SALFL+ K E L+ GDD AL++LRK++ L + +E+V
Sbjct: 66 GCVNTLNTVKELMDETRASALFLVIKQCLLECLSCGDDSMALAVLRKQVPALRLGREKVC 125
Query: 1547 KLASGIVFSGNEDMDSCCSGNEDXXXXXXXXXXXXXXXLFPPHVIVPDRRLECLVERAVL 1368
LA ++ D+ ++ L PP +++P+ RLE LVE A+
Sbjct: 126 NLAYNLLCLKEVDLSKTY---DNAILELRNVLLKQLEKLLPPPIVLPEIRLEHLVETAIT 182
Query: 1367 AQRDACVYHNSSNEISLYEDHCCGRDQIPTETLQILDSHEDEVWFVQFSNNGDYLASSSS 1188
AQ D+C+YHNS +SL+EDHCC RDQIPTET+QIL HE+EVWFVQFSNNG YLASSSS
Sbjct: 183 AQIDSCMYHNSQEAVSLFEDHCCKRDQIPTETVQILTEHENEVWFVQFSNNGHYLASSSS 242
Query: 1187 DHTAIIWKVSEEGILSLKHTLRSHQNPVSFVAWSPDDTMLLTCGNGEVLKLWDVETGTCK 1008
D TAIIW+V E+ L++K TLRSHQ PVSFVAWSPDDT LLTCGN EVLKLWDVETGTCK
Sbjct: 243 DCTAIIWEVLEDDRLTIKRTLRSHQKPVSFVAWSPDDTKLLTCGNLEVLKLWDVETGTCK 302
Query: 1007 HTFGEKSPIVSSCAWLPDSKRLVCGSSDPNKCIYMWDLDGNELEAWRGVRMPKVSDLAVT 828
HTFG+ IVSSCAW PDSKR VCGSSDP K I MWD GNE++AWRG RMPKV DLAVT
Sbjct: 303 HTFGDHGFIVSSCAWFPDSKRFVCGSSDPEKGICMWDCHGNEIKAWRGTRMPKVLDLAVT 362
Query: 827 PDGEHLISICSEKDIRIYSFRSKTDRVVKEDHPITSLSVSKNSEFLIVNLNSQEIHLWEI 648
PDG HLIS+ S+KDIRI++ + ++V+ E+HPITSLSVS +S+F IVNLNSQEIHLW++
Sbjct: 363 PDGVHLISVFSDKDIRIFNLVTNAEQVISEEHPITSLSVSIDSKFFIVNLNSQEIHLWDV 422
Query: 647 VETGNKPLKYTGHKQGKYVIRSCFGGVDCMFIASGSENSQVYIWNRKNQKPLEVLTGHSM 468
K L+Y GHKQ KYVIRSCFGG++ FIASGSENSQVYIWNR+N +P+EVL+GH M
Sbjct: 423 AGNWEKALRYMGHKQHKYVIRSCFGGLNSSFIASGSENSQVYIWNRQNSRPIEVLSGHLM 482
Query: 467 TVNCVSWNPTQPQMLASASDDQTIRIWGPSRKK 369
TVNCVSWNP + QMLASASDDQTIRIWGPS+ K
Sbjct: 483 TVNCVSWNPRRHQMLASASDDQTIRIWGPSQSK 515
>ref|NP_199205.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
gi|9758551|dbj|BAB09052.1| WD-repeat protein-like
[Arabidopsis thaliana] gi|110742722|dbj|BAE99272.1|
WD-repeat protein-like [Arabidopsis thaliana]
gi|148535209|gb|ABQ85545.1| will die slowly [Arabidopsis
thaliana] gi|332007645|gb|AED95028.1| transducin/WD40
domain-containing protein [Arabidopsis thaliana]
Length = 523
Score = 588 bits (1517), Expect = e-165
Identities = 291/517 (56%), Positives = 373/517 (72%), Gaps = 6/517 (1%)
Frame = -3
Query: 1907 LGSKSQINKTEFTRLIISYLYSLGFXXXXXXXXXXXXXXXXXPQLLSLETQILNNSSNFD 1728
LGSK + K EF R+++ LYSLGF LE Q+L S N+D
Sbjct: 9 LGSKGLLKKHEFIRILVQCLYSLGFKNSASCLEFESKILYKTADSEFLEKQVL--SGNWD 66
Query: 1727 TCIETIQN-FDTLSEQVRSSALFLLFKHIFTEFLNTGDDLSALSILRKRISVLGVDKERV 1551
+C++ + FD + R++AL+L+FK E+L GD AL++LRK+ +L + KE++
Sbjct: 67 SCVQVLDRIFDNSMDDTRNTALYLVFKQCLLEYLKRGDVSLALNVLRKQAPLLRMGKEKI 126
Query: 1550 HKLASGIVFSG---NEDMDSCCSGNEDXXXXXXXXXXXXXXXLFPPHVIVPDRRLECLVE 1380
H+LA IV+S + ++D+C L P +++P+RRLE LVE
Sbjct: 127 HRLACDIVYSKEMESGEVDNCL------VLDLRRKLLVELEKLIPLPIVIPERRLEHLVE 180
Query: 1379 RAVLAQRDACVYHNSSNEISLYEDHCCGRDQIPTETLQILDSHEDEVWFVQFSNNGDYLA 1200
AV+ Q D C+YHNS + +SLY+DHCCGRDQIP+ET+QIL +H++EVWFVQFSN+G YLA
Sbjct: 181 TAVMDQIDTCMYHNSCDAVSLYKDHCCGRDQIPSETVQILVAHKNEVWFVQFSNSGKYLA 240
Query: 1199 SSSSDHTAIIWKVSEEGILSLKHTLRSHQNPVSFVAWSPDDTMLLTCGNGEVLKLWDVET 1020
++SSD TAIIWKV ++ + LKHTL SHQNPVSFV+WSPDDT LLTCGN EVLKLWDV+T
Sbjct: 241 TASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSPDDTKLLTCGNAEVLKLWDVDT 300
Query: 1019 GTCKHTFGEKSP--IVSSCAWLPDSKRLVCGSSDPNKCIYMWDLDGNELEAWRGVRMPKV 846
G +HTFG + VSSCAW PDS RLVCGSSDP + I MWD DGNE++AWRG R+PKV
Sbjct: 301 GVLRHTFGNNNTGFTVSSCAWFPDSTRLVCGSSDPERGIVMWDTDGNEIKAWRGTRIPKV 360
Query: 845 SDLAVTPDGEHLISICSEKDIRIYSFRSKTDRVVKEDHPITSLSVSKNSEFLIVNLNSQE 666
DLAVTPDGE +I++ S+K+IRI + +K +RV+ E+ PITSLS+S + +F IVNL+ QE
Sbjct: 361 VDLAVTPDGESMITVFSDKEIRILNLETKVERVISEEQPITSLSISGDGKFFIVNLSCQE 420
Query: 665 IHLWEIVETGNKPLKYTGHKQGKYVIRSCFGGVDCMFIASGSENSQVYIWNRKNQKPLEV 486
IHLW++ +PLK++GH+Q KYVIRSCFGG+D FIASGSE+SQVYIWN KN KPLEV
Sbjct: 421 IHLWDLAGEWKQPLKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPLEV 480
Query: 485 LTGHSMTVNCVSWNPTQPQMLASASDDQTIRIWGPSR 375
L+GHSMTVNCVSWNP P+MLASASDDQTIRIWGP +
Sbjct: 481 LSGHSMTVNCVSWNPKNPRMLASASDDQTIRIWGPGK 517
>ref|XP_003554312.1| PREDICTED: WD repeat-containing protein 26-like [Glycine max]
Length = 523
Score = 586 bits (1510), Expect = e-165
Identities = 296/513 (57%), Positives = 368/513 (71%)
Frame = -3
Query: 1907 LGSKSQINKTEFTRLIISYLYSLGFXXXXXXXXXXXXXXXXXPQLLSLETQILNNSSNFD 1728
LGSK I + EF R+II LYSLG+ ++ LE+ ILN S +D
Sbjct: 8 LGSKGLIRRHEFVRIIIQCLYSLGYSSSASCLESESGISYKSNEVKLLESLILNGS--WD 65
Query: 1727 TCIETIQNFDTLSEQVRSSALFLLFKHIFTEFLNTGDDLSALSILRKRISVLGVDKERVH 1548
I+ + + + R SALFL+F+ E+LN G+ AL +LRK++S L K +VH
Sbjct: 66 ESIDYLNSIKDELGETRESALFLVFRQCVMEYLNCGEYALALGVLRKQVSALDAGKCKVH 125
Query: 1547 KLASGIVFSGNEDMDSCCSGNEDXXXXXXXXXXXXXXXLFPPHVIVPDRRLECLVERAVL 1368
A ++ + ++ + G + LFPP + VP+ RLE LVE V+
Sbjct: 126 SFAKCLLSFKDRELGAV-DGGDVVVHDLRKKLLADLEKLFPPPISVPEGRLEHLVENTVM 184
Query: 1367 AQRDACVYHNSSNEISLYEDHCCGRDQIPTETLQILDSHEDEVWFVQFSNNGDYLASSSS 1188
+ D+C+YH+SS+ ISLYEDH C RDQIPT T QIL H++EVWFVQFSNNG+YLASSS+
Sbjct: 185 SWVDSCMYHSSSSPISLYEDHHCSRDQIPTTTTQILTGHKNEVWFVQFSNNGEYLASSSN 244
Query: 1187 DHTAIIWKVSEEGILSLKHTLRSHQNPVSFVAWSPDDTMLLTCGNGEVLKLWDVETGTCK 1008
D TAIIWKV E+G L+LKHTL HQ+ VSFVAWSPDDT LLTCGN EVLKLWDVETGTCK
Sbjct: 245 DCTAIIWKVLEDGKLTLKHTLYGHQHAVSFVAWSPDDTKLLTCGNTEVLKLWDVETGTCK 304
Query: 1007 HTFGEKSPIVSSCAWLPDSKRLVCGSSDPNKCIYMWDLDGNELEAWRGVRMPKVSDLAVT 828
HTFG + +VSSCAW P+SK+ VCGSSDP K + MWD DGN +++WRG+RMPKV DLAVT
Sbjct: 305 HTFGNQGFVVSSCAWFPNSKQFVCGSSDPEKGVCMWDCDGNVIKSWRGMRMPKVVDLAVT 364
Query: 827 PDGEHLISICSEKDIRIYSFRSKTDRVVKEDHPITSLSVSKNSEFLIVNLNSQEIHLWEI 648
PDGE+LISI +K+IRI + +RV+ E+HPITSLSVS +S+F IVNLNSQEIH+W++
Sbjct: 365 PDGEYLISIFMDKEIRILHMGTYAERVISEEHPITSLSVSGDSKFFIVNLNSQEIHMWDV 424
Query: 647 VETGNKPLKYTGHKQGKYVIRSCFGGVDCMFIASGSENSQVYIWNRKNQKPLEVLTGHSM 468
+KPL++ GHKQ KYVIRSCFGG++ FIASGSENSQVYIWN +N +P+EVL+GHSM
Sbjct: 425 AGKWDKPLRFMGHKQHKYVIRSCFGGLNNTFIASGSENSQVYIWNCRNSRPVEVLSGHSM 484
Query: 467 TVNCVSWNPTQPQMLASASDDQTIRIWGPSRKK 369
TVNCVSWNP PQMLASASDD TIRIWGPS +K
Sbjct: 485 TVNCVSWNPKIPQMLASASDDYTIRIWGPSLQK 517
>ref|XP_002865396.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
gi|297311231|gb|EFH41655.1| transducin family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 523
Score = 583 bits (1503), Expect = e-164
Identities = 290/517 (56%), Positives = 372/517 (71%), Gaps = 6/517 (1%)
Frame = -3
Query: 1907 LGSKSQINKTEFTRLIISYLYSLGFXXXXXXXXXXXXXXXXXPQLLSLETQILNNSSNFD 1728
LGSK + K EF R+++ LYSLGF SLE ++L S ++D
Sbjct: 9 LGSKGLLKKHEFIRILVQCLYSLGFKNSASCLEIESNISCKSADYESLEKRVL--SGDWD 66
Query: 1727 TCIETIQN-FDTLSEQVRSSALFLLFKHIFTEFLNTGDDLSALSILRKRISVLGVDKERV 1551
+C+ + FD + R++A++L+FK E+L GD AL++LRK+ +L + KE++
Sbjct: 67 SCVAVLDRIFDHSKDDTRNTAVYLVFKQCLLEYLKRGDVSLALNVLRKQAPMLRMGKEKI 126
Query: 1550 HKLASGIVFSG---NEDMDSCCSGNEDXXXXXXXXXXXXXXXLFPPHVIVPDRRLECLVE 1380
H+LA IV+S + ++DSC L P +++P RRLE LVE
Sbjct: 127 HRLACDIVYSKEMESGEVDSCL------VQGLRKKLLVELEKLIPLPIVIPKRRLEHLVE 180
Query: 1379 RAVLAQRDACVYHNSSNEISLYEDHCCGRDQIPTETLQILDSHEDEVWFVQFSNNGDYLA 1200
AV+ Q D+C+YHNS + +SLY+DHCCGRDQIP+ET+QIL +H++EVWFVQFSN+G YLA
Sbjct: 181 TAVMDQIDSCLYHNSWDAVSLYKDHCCGRDQIPSETVQILMAHKNEVWFVQFSNSGKYLA 240
Query: 1199 SSSSDHTAIIWKVSEEGILSLKHTLRSHQNPVSFVAWSPDDTMLLTCGNGEVLKLWDVET 1020
++SSD TAIIWKV ++ + LKHTL SHQNPVSFV+WSPDDT LLTCGN EVLKLWDV+T
Sbjct: 241 TASSDCTAIIWKVLDDSKVELKHTLESHQNPVSFVSWSPDDTKLLTCGNAEVLKLWDVDT 300
Query: 1019 GTCKHTFGEKSP--IVSSCAWLPDSKRLVCGSSDPNKCIYMWDLDGNELEAWRGVRMPKV 846
G +HTFG + VSSCAW PDS RLVCGSSDP + I MWD DGNE++AWRG R+PKV
Sbjct: 301 GVLRHTFGNNNTGFTVSSCAWFPDSTRLVCGSSDPERGIVMWDTDGNEIKAWRGTRIPKV 360
Query: 845 SDLAVTPDGEHLISICSEKDIRIYSFRSKTDRVVKEDHPITSLSVSKNSEFLIVNLNSQE 666
DLAVTPDGE +I++ S+K+IRI + +K +RV+ E+ PITSLS+S + +F IVNL+ QE
Sbjct: 361 VDLAVTPDGESMITVFSDKEIRILNLETKVERVIPEEQPITSLSISGDGKFFIVNLSCQE 420
Query: 665 IHLWEIVETGNKPLKYTGHKQGKYVIRSCFGGVDCMFIASGSENSQVYIWNRKNQKPLEV 486
IHLW++ PLK++GH+Q KYVIRSCFGG+D FIASGSE+SQVYIWN KN KPLEV
Sbjct: 421 IHLWDLAGEWKLPLKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNAKPLEV 480
Query: 485 LTGHSMTVNCVSWNPTQPQMLASASDDQTIRIWGPSR 375
L+GHSMTVNCVSWNP P+MLASASDDQTIRIWGP +
Sbjct: 481 LSGHSMTVNCVSWNPKNPRMLASASDDQTIRIWGPGK 517