BLASTX nr result

ID: Coptis21_contig00018329 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018329
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004166117.1| PREDICTED: LOW QUALITY PROTEIN: probable leu...   224   4e-57
ref|XP_004146459.1| PREDICTED: probably inactive leucine-rich re...   224   4e-57
ref|XP_002315129.1| predicted protein [Populus trichocarpa] gi|2...   223   1e-56
ref|XP_002277929.1| PREDICTED: probable leucine-rich repeat rece...   223   1e-56
ref|XP_002520798.1| Nodulation receptor kinase precursor, putati...   223   1e-56

>ref|XP_004166117.1| PREDICTED: LOW QUALITY PROTEIN: probable leucine-rich repeat
           receptor-like protein kinase IMK3-like [Cucumis sativus]
          Length = 844

 Score =  224 bits (572), Expect = 4e-57
 Identities = 108/123 (87%), Positives = 113/123 (91%)
 Frame = +2

Query: 5   GGDSGGKLVHFDGQLVFTADDLLCATAEIMGKSTYGTVYKATLEDGNQVAVKRLREKIAK 184
           GGD+GGKLVHFDGQ VFTADDLLCATAEIMGKSTYGTVYKATLEDGNQVAVKRLREKI K
Sbjct: 524 GGDAGGKLVHFDGQTVFTADDLLCATAEIMGKSTYGTVYKATLEDGNQVAVKRLREKITK 583

Query: 185 GLREFEIEVNLLGKIRHPNLLALRAYYLGPKGEKLLVFDFMPRGSLGAFLHARGPDSPID 364
             +EFE EVN+LGKIRHPNLLALRAYYLGPKGEKLLVFD+MP GSL  FLHARGPD+ ID
Sbjct: 584 SQKEFEAEVNILGKIRHPNLLALRAYYLGPKGEKLLVFDYMPNGSLATFLHARGPDTSID 643

Query: 365 WST 373
           W T
Sbjct: 644 WPT 646


>ref|XP_004146459.1| PREDICTED: probably inactive leucine-rich repeat receptor-like
           protein kinase IMK2-like [Cucumis sativus]
          Length = 844

 Score =  224 bits (572), Expect = 4e-57
 Identities = 108/123 (87%), Positives = 113/123 (91%)
 Frame = +2

Query: 5   GGDSGGKLVHFDGQLVFTADDLLCATAEIMGKSTYGTVYKATLEDGNQVAVKRLREKIAK 184
           GGD+GGKLVHFDGQ VFTADDLLCATAEIMGKSTYGTVYKATLEDGNQVAVKRLREKI K
Sbjct: 523 GGDAGGKLVHFDGQTVFTADDLLCATAEIMGKSTYGTVYKATLEDGNQVAVKRLREKITK 582

Query: 185 GLREFEIEVNLLGKIRHPNLLALRAYYLGPKGEKLLVFDFMPRGSLGAFLHARGPDSPID 364
             +EFE EVN+LGKIRHPNLLALRAYYLGPKGEKLLVFD+MP GSL  FLHARGPD+ ID
Sbjct: 583 SQKEFEAEVNILGKIRHPNLLALRAYYLGPKGEKLLVFDYMPNGSLATFLHARGPDTSID 642

Query: 365 WST 373
           W T
Sbjct: 643 WPT 645


>ref|XP_002315129.1| predicted protein [Populus trichocarpa] gi|222864169|gb|EEF01300.1|
           predicted protein [Populus trichocarpa]
          Length = 827

 Score =  223 bits (569), Expect = 1e-56
 Identities = 107/124 (86%), Positives = 116/124 (93%)
 Frame = +2

Query: 2   SGGDSGGKLVHFDGQLVFTADDLLCATAEIMGKSTYGTVYKATLEDGNQVAVKRLREKIA 181
           SGG++GGKLVHFDG +VFTADDLLCATAEIMGKSTYGTVY+ATLEDGNQVAVKRLREKI 
Sbjct: 509 SGGEAGGKLVHFDGPMVFTADDLLCATAEIMGKSTYGTVYRATLEDGNQVAVKRLREKIT 568

Query: 182 KGLREFEIEVNLLGKIRHPNLLALRAYYLGPKGEKLLVFDFMPRGSLGAFLHARGPDSPI 361
           KG REFE EVN+LGKIRHPNLLALRAYYLGPKGEKLLVFD++P+GSL  FLHARGPD+ I
Sbjct: 569 KGQREFESEVNVLGKIRHPNLLALRAYYLGPKGEKLLVFDYIPKGSLATFLHARGPDTLI 628

Query: 362 DWST 373
           DW T
Sbjct: 629 DWPT 632


>ref|XP_002277929.1| PREDICTED: probable leucine-rich repeat receptor-like protein
           kinase IMK3-like isoform 1 [Vitis vinifera]
          Length = 869

 Score =  223 bits (568), Expect = 1e-56
 Identities = 107/124 (86%), Positives = 115/124 (92%)
 Frame = +2

Query: 2   SGGDSGGKLVHFDGQLVFTADDLLCATAEIMGKSTYGTVYKATLEDGNQVAVKRLREKIA 181
           +GG++GGKLVHFDG +VFTADDLLCATAEIMGKSTYGTVYKATLEDGN+VAVKRLREKI 
Sbjct: 554 AGGEAGGKLVHFDGPMVFTADDLLCATAEIMGKSTYGTVYKATLEDGNEVAVKRLREKIT 613

Query: 182 KGLREFEIEVNLLGKIRHPNLLALRAYYLGPKGEKLLVFDFMPRGSLGAFLHARGPDSPI 361
           K  REFE EVN+LGKIRHPNLLALRAYYLGPKGEKLLVFD+MP+GSL AFLHARGPD  I
Sbjct: 614 KSQREFETEVNVLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPKGSLAAFLHARGPDISI 673

Query: 362 DWST 373
           DW T
Sbjct: 674 DWPT 677


>ref|XP_002520798.1| Nodulation receptor kinase precursor, putative [Ricinus communis]
           gi|223539929|gb|EEF41507.1| Nodulation receptor kinase
           precursor, putative [Ricinus communis]
          Length = 624

 Score =  223 bits (568), Expect = 1e-56
 Identities = 108/124 (87%), Positives = 113/124 (91%)
 Frame = +2

Query: 2   SGGDSGGKLVHFDGQLVFTADDLLCATAEIMGKSTYGTVYKATLEDGNQVAVKRLREKIA 181
           SGG+ GGKLVHFDG L FTADDLLCATAEIMGKSTYGTVYKATLEDGNQVAVKRLREKI 
Sbjct: 306 SGGEVGGKLVHFDGPLAFTADDLLCATAEIMGKSTYGTVYKATLEDGNQVAVKRLREKIT 365

Query: 182 KGLREFEIEVNLLGKIRHPNLLALRAYYLGPKGEKLLVFDFMPRGSLGAFLHARGPDSPI 361
           KG REFE EVN LGKIRHPNLLALRAYYLGPKGEKLLVFD+M +GSL  FLHARGPD+P+
Sbjct: 366 KGQREFENEVNALGKIRHPNLLALRAYYLGPKGEKLLVFDYMSKGSLATFLHARGPDTPL 425

Query: 362 DWST 373
           DW T
Sbjct: 426 DWPT 429


Top