BLASTX nr result

ID: Coptis21_contig00018288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018288
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFH03054.1| R2R3-MYB transcription factor MYB2 [Epimedium sag...   109   3e-22
ref|XP_002512589.1| r2r3-myb transcription factor, putative [Ric...   100   2e-19
ref|XP_002281027.1| PREDICTED: uncharacterized protein LOC100247...    98   6e-19
ref|XP_002276091.1| PREDICTED: uncharacterized protein LOC100240...    97   1e-18
emb|CAN62191.1| hypothetical protein VITISV_020114 [Vitis vinifera]    97   1e-18

>gb|AFH03054.1| R2R3-MYB transcription factor MYB2 [Epimedium sagittatum]
          Length = 440

 Score =  109 bits (272), Expect = 3e-22
 Identities = 62/118 (52%), Positives = 78/118 (66%), Gaps = 1/118 (0%)
 Frame = +2

Query: 2   WNSCIKKKLRQRGIDPNTHKPLSEVENAEEKTESTYNNTSSLKASEESNEMNLVKAENSG 181
           WNSCIKKKLRQRGIDPNTHKPLSEVEN E+   +  N+  S      SNEMN++ AE S 
Sbjct: 108 WNSCIKKKLRQRGIDPNTHKPLSEVENEEKLANNNKNSGES-----NSNEMNILTAETSA 162

Query: 182 SVVVEPKSPLAASDWFTIDGYSSTKMXXXXXXXATVTP-TKDFFLDRFINSHRGSTTT 352
               EPK P+ + + F+++G S++K         TV P TKDFFLDRFI +H  S+T+
Sbjct: 163 P--PEPKPPIYSGNRFSVEGPSNSKF--SNTNSITVNPTTKDFFLDRFIATHNTSSTS 216


>ref|XP_002512589.1| r2r3-myb transcription factor, putative [Ricinus communis]
           gi|223548550|gb|EEF50041.1| r2r3-myb transcription
           factor, putative [Ricinus communis]
          Length = 283

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 63/122 (51%), Positives = 75/122 (61%), Gaps = 5/122 (4%)
 Frame = +2

Query: 2   WNSCIKKKLRQRGIDPNTHKPLSEVENAEEKTESTYNNTSSLKASEESNEMNLVKAENSG 181
           WNSCIKKKLRQRGIDPNTHKPLSEVE+ +EK  S+  N    K+S  SNE+NL++A    
Sbjct: 44  WNSCIKKKLRQRGIDPNTHKPLSEVESDKEKQNSSCKNIE--KSSLVSNELNLIEA---- 97

Query: 182 SVVVEPKSPLAASDWFTIDGYSSTKMXXXXXXXATVT---PTKDFFLDRFIN--SHRGST 346
           + V   K   A S        SSTKM       + +T   PT++FFLDRF N  SH  ST
Sbjct: 98  AAVANSKPSTAIS--------SSTKMTSNNDSSSNLTPTPPTQEFFLDRFANATSHESST 149

Query: 347 TT 352
           TT
Sbjct: 150 TT 151


>ref|XP_002281027.1| PREDICTED: uncharacterized protein LOC100247039 [Vitis vinifera]
          Length = 451

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 59/126 (46%), Positives = 79/126 (62%), Gaps = 10/126 (7%)
 Frame = +2

Query: 2   WNSCIKKKLRQRGIDPNTHKPLSEVENAEEKTESTYNNTSSLKASEESNEMNLVKAENS- 178
           WNSC+KKKLRQRGIDPNTHKPLSEVEN E+    T    S  KAS  S+E+NL+K +NS 
Sbjct: 108 WNSCLKKKLRQRGIDPNTHKPLSEVENREDSNPPT---DSQDKASGVSSELNLLKVDNSK 164

Query: 179 -GSVVVEPKSPLAASDWF--TIDGYSSTKM------XXXXXXXATVTPTKDFFLDRFINS 331
             + ++E +S   A+  +   ++G SS+K               + TP KDFFLDRF+ S
Sbjct: 165 PEAALLEQRSSSIATRGYGMEVEGSSSSKTINSNNNNNSNSNLMSPTPNKDFFLDRFMIS 224

Query: 332 HRGSTT 349
           H+ ++T
Sbjct: 225 HQENST 230


>ref|XP_002276091.1| PREDICTED: uncharacterized protein LOC100240910 [Vitis vinifera]
          Length = 439

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 53/117 (45%), Positives = 70/117 (59%)
 Frame = +2

Query: 2   WNSCIKKKLRQRGIDPNTHKPLSEVENAEEKTESTYNNTSSLKASEESNEMNLVKAENSG 181
           WNSCIKKKLRQ+GIDPNTHKPL E EN ++K        +S K++E++NE+NLV+AEN  
Sbjct: 108 WNSCIKKKLRQKGIDPNTHKPLVEAENGQDKL------PNSDKSNEKANELNLVEAEN-- 159

Query: 182 SVVVEPKSPLAASDWFTIDGYSSTKMXXXXXXXATVTPTKDFFLDRFINSHRGSTTT 352
              ++P S  A      +   S               PT++FFLDRF+ SH  STT+
Sbjct: 160 ---LKPLSTAAEQYPVEVSPSSKINSSSNGNNLTPPQPTQEFFLDRFVTSHESSTTS 213


>emb|CAN62191.1| hypothetical protein VITISV_020114 [Vitis vinifera]
          Length = 439

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 53/117 (45%), Positives = 70/117 (59%)
 Frame = +2

Query: 2   WNSCIKKKLRQRGIDPNTHKPLSEVENAEEKTESTYNNTSSLKASEESNEMNLVKAENSG 181
           WNSCIKKKLRQ+GIDPNTHKPL E EN ++K        +S K++E++NE+NLV+AEN  
Sbjct: 108 WNSCIKKKLRQKGIDPNTHKPLVEAENGQDKL------PNSDKSNEKANELNLVEAEN-- 159

Query: 182 SVVVEPKSPLAASDWFTIDGYSSTKMXXXXXXXATVTPTKDFFLDRFINSHRGSTTT 352
              ++P S  A      +   S               PT++FFLDRF+ SH  STT+
Sbjct: 160 ---LKPLSTAAEQYPVEVSPSSKINSSSNGNNLTXPQPTQEFFLDRFVTSHESSTTS 213


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