BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018209
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510662.1| ribosome biogenesis protein tsr1, putative [...   117   7e-25
ref|XP_002888409.1| hypothetical protein ARALYDRAFT_894100 [Arab...   116   2e-24
ref|XP_002307783.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_002893932.1| hypothetical protein ARALYDRAFT_473739 [Arab...   115   5e-24
ref|XP_003527368.1| PREDICTED: pre-rRNA-processing protein TSR1 ...   113   1e-23

>ref|XP_002510662.1| ribosome biogenesis protein tsr1, putative [Ricinus communis]
           gi|223551363|gb|EEF52849.1| ribosome biogenesis protein
           tsr1, putative [Ricinus communis]
          Length = 792

 Score =  117 bits (294), Expect = 7e-25
 Identities = 51/68 (75%), Positives = 62/68 (91%)
 Frame = -1

Query: 388 KDLPVELKKRNELKKMCMSNLAS*FPEDSKFYPADTKDELHKFLWLFKEQHITLPHWRSQ 209
           +DLP +LK++N+LKKM  SNLAS FPED KFYPADTKDELHKFLWLF+EQ +TLPHWR+Q
Sbjct: 187 RDLPTDLKRKNDLKKMFTSNLASEFPEDCKFYPADTKDELHKFLWLFREQRLTLPHWRNQ 246

Query: 208 QPYLMAQE 185
           +PYLM+Q+
Sbjct: 247 RPYLMSQK 254


>ref|XP_002888409.1| hypothetical protein ARALYDRAFT_894100 [Arabidopsis lyrata subsp.
           lyrata] gi|297334250|gb|EFH64668.1| hypothetical protein
           ARALYDRAFT_894100 [Arabidopsis lyrata subsp. lyrata]
          Length = 792

 Score =  116 bits (291), Expect = 2e-24
 Identities = 50/70 (71%), Positives = 62/70 (88%)
 Frame = -1

Query: 394 MAKDLPVELKKRNELKKMCMSNLAS*FPEDSKFYPADTKDELHKFLWLFKEQHITLPHWR 215
           + +DLP ELKK+NELKK+C S LAS FPED KFYPADT+DELHKF+WLFK Q +T+PHWR
Sbjct: 189 LIRDLPSELKKKNELKKICASQLASEFPEDCKFYPADTRDELHKFMWLFKAQRLTVPHWR 248

Query: 214 SQQPYLMAQE 185
           SQ+PY++AQ+
Sbjct: 249 SQRPYVVAQK 258


>ref|XP_002307783.1| predicted protein [Populus trichocarpa] gi|222857232|gb|EEE94779.1|
           predicted protein [Populus trichocarpa]
          Length = 798

 Score =  116 bits (290), Expect = 2e-24
 Identities = 51/68 (75%), Positives = 61/68 (89%)
 Frame = -1

Query: 388 KDLPVELKKRNELKKMCMSNLAS*FPEDSKFYPADTKDELHKFLWLFKEQHITLPHWRSQ 209
           +DLP +LK +NELKKM +SNLA  FPED KFYPADTKDELHKFLWLFKEQ +T+PHWR+Q
Sbjct: 192 RDLPSDLKGKNELKKMSISNLAGEFPEDCKFYPADTKDELHKFLWLFKEQRLTVPHWRNQ 251

Query: 208 QPYLMAQE 185
           +PYLM+Q+
Sbjct: 252 RPYLMSQK 259


>ref|XP_002893932.1| hypothetical protein ARALYDRAFT_473739 [Arabidopsis lyrata subsp.
           lyrata] gi|297339774|gb|EFH70191.1| hypothetical protein
           ARALYDRAFT_473739 [Arabidopsis lyrata subsp. lyrata]
          Length = 799

 Score =  115 bits (287), Expect = 5e-24
 Identities = 48/70 (68%), Positives = 62/70 (88%)
 Frame = -1

Query: 394 MAKDLPVELKKRNELKKMCMSNLAS*FPEDSKFYPADTKDELHKFLWLFKEQHITLPHWR 215
           + +DLP ++KK+NE+KKMC S LAS FPED KFYPADT+DELHKF+WLFK Q +T+PHWR
Sbjct: 207 LIRDLPSDVKKKNEMKKMCASQLASEFPEDCKFYPADTRDELHKFMWLFKAQRLTVPHWR 266

Query: 214 SQQPYLMAQE 185
           SQ+PY++AQ+
Sbjct: 267 SQRPYVVAQK 276


>ref|XP_003527368.1| PREDICTED: pre-rRNA-processing protein TSR1 homolog [Glycine max]
          Length = 792

 Score =  113 bits (283), Expect = 1e-23
 Identities = 50/68 (73%), Positives = 60/68 (88%)
 Frame = -1

Query: 388 KDLPVELKKRNELKKMCMSNLAS*FPEDSKFYPADTKDELHKFLWLFKEQHITLPHWRSQ 209
           +DLP ELK RNELKK+C S+LAS FPED KFYPADTKDELHKFLWLFKEQ + +PHWR+Q
Sbjct: 190 RDLPPELKHRNELKKICTSSLASEFPEDCKFYPADTKDELHKFLWLFKEQRLKVPHWRTQ 249

Query: 208 QPYLMAQE 185
           + YL++Q+
Sbjct: 250 RSYLLSQK 257