BLASTX nr result

ID: Coptis21_contig00018207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018207
         (2276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28924.3| unnamed protein product [Vitis vinifera]              133   2e-28
ref|XP_002272957.1| PREDICTED: uncharacterized protein LOC100246...   133   2e-28
ref|XP_002319377.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-27
ref|XP_002517981.1| micronuclear linker histone polyprotein, put...   119   3e-24
ref|XP_002329400.1| predicted protein [Populus trichocarpa] gi|2...   112   6e-22

>emb|CBI28924.3| unnamed protein product [Vitis vinifera]
          Length = 482

 Score =  133 bits (335), Expect = 2e-28
 Identities = 97/285 (34%), Positives = 143/285 (50%), Gaps = 14/285 (4%)
 Frame = -1

Query: 2006 HKLRERRIFTXXXXXXXXXXXXXXXXXXKERESAKEMKRKVEELKAKTYSLRTQKMELIN 1827
            HKLR+RRIF                   KERES KE +RK+EELKAK   L++Q MEL +
Sbjct: 4    HKLRDRRIFNLLVKEKDRQRISLQLLLQKERESTKEERRKIEELKAKILYLKSQNMELHS 63

Query: 1826 KVAAMQAISSAIKEEKRELETTVAEKQNEINKLQQMKIDSNKENSQVAALRELLKQKETE 1647
            +V  MQ+  +++++E + LE    EKQ EI  LQ+ + DS KEN +  AL+E+LK++E E
Sbjct: 64   RVMEMQSTIASLRDEHKTLEMAFDEKQTEIKMLQERETDSIKENPEAIALKEILKKREAE 123

Query: 1646 IGQLKHQIEKPTNIWSVSTDDPSNPAVNLTSEAVSDKTGNWKHTELEASFKDEQSEKSYV 1467
            I  LKH +            DPSNP VNLT+     +   W+        K++       
Sbjct: 124  IEDLKHHL------------DPSNPPVNLTAR----ENMGWEDKTKAREGKEQNEHLHEA 167

Query: 1466 HDDGKPSSVRGKGDIKVVTEGTELKETHGGQK--HKFENGRDGEA---SREKSNAVEKNT 1302
              +G    + G GD      G  L++   G+    KFEN +DG A   + EKS   ++  
Sbjct: 168  DSNGNGQKLTG-GDGSENGVGVNLQKEMTGEAKFQKFENTQDGVAGGITGEKSINADQGN 226

Query: 1301 EDKH---------RREKDLGDSMSSLFANPQGKEGFIERGENEKV 1194
            ++KH         R EK   ++  ++F +  GK   I+  +N+KV
Sbjct: 227  KNKHSQDELDFGTREEKADPNATEAIFKSEVGKT--IDEDDNKKV 269


>ref|XP_002272957.1| PREDICTED: uncharacterized protein LOC100246486 [Vitis vinifera]
          Length = 517

 Score =  133 bits (335), Expect = 2e-28
 Identities = 97/285 (34%), Positives = 143/285 (50%), Gaps = 14/285 (4%)
 Frame = -1

Query: 2006 HKLRERRIFTXXXXXXXXXXXXXXXXXXKERESAKEMKRKVEELKAKTYSLRTQKMELIN 1827
            HKLR+RRIF                   KERES KE +RK+EELKAK   L++Q MEL +
Sbjct: 39   HKLRDRRIFNLLVKEKDRQRISLQLLLQKERESTKEERRKIEELKAKILYLKSQNMELHS 98

Query: 1826 KVAAMQAISSAIKEEKRELETTVAEKQNEINKLQQMKIDSNKENSQVAALRELLKQKETE 1647
            +V  MQ+  +++++E + LE    EKQ EI  LQ+ + DS KEN +  AL+E+LK++E E
Sbjct: 99   RVMEMQSTIASLRDEHKTLEMAFDEKQTEIKMLQERETDSIKENPEAIALKEILKKREAE 158

Query: 1646 IGQLKHQIEKPTNIWSVSTDDPSNPAVNLTSEAVSDKTGNWKHTELEASFKDEQSEKSYV 1467
            I  LKH +            DPSNP VNLT+     +   W+        K++       
Sbjct: 159  IEDLKHHL------------DPSNPPVNLTAR----ENMGWEDKTKAREGKEQNEHLHEA 202

Query: 1466 HDDGKPSSVRGKGDIKVVTEGTELKETHGGQK--HKFENGRDGEA---SREKSNAVEKNT 1302
              +G    + G GD      G  L++   G+    KFEN +DG A   + EKS   ++  
Sbjct: 203  DSNGNGQKLTG-GDGSENGVGVNLQKEMTGEAKFQKFENTQDGVAGGITGEKSINADQGN 261

Query: 1301 EDKH---------RREKDLGDSMSSLFANPQGKEGFIERGENEKV 1194
            ++KH         R EK   ++  ++F +  GK   I+  +N+KV
Sbjct: 262  KNKHSQDELDFGTREEKADPNATEAIFKSEVGKT--IDEDDNKKV 304


>ref|XP_002319377.1| predicted protein [Populus trichocarpa] gi|222857753|gb|EEE95300.1|
            predicted protein [Populus trichocarpa]
          Length = 531

 Score =  130 bits (328), Expect = 1e-27
 Identities = 89/258 (34%), Positives = 132/258 (51%), Gaps = 21/258 (8%)
 Frame = -1

Query: 1898 MKRKVEELKAKTYSLRTQKMELINKVAAMQAISSAIKEEKRELETTVAEKQNEINKLQQM 1719
            MKRK EE+KAK YSLR QKMEL  ++  MQ+   ++K+E++ +E+ + EKQ+EI  L++ 
Sbjct: 1    MKRKTEEMKAKIYSLRIQKMELDRRLLEMQSTIGSMKDEQKIMESALEEKQSEIKMLRET 60

Query: 1718 KIDSNKENSQVAALRELLKQKETEIGQLKHQIEKPTNIWSVSTDDPSNPAVNLT------ 1557
               + KE  Q+  LRE LKQKE EI  LKH++E P  IWSVSTDDPS+P+VN T      
Sbjct: 61   NKGAEKETLQMEVLRESLKQKEAEIEDLKHRLEYPAKIWSVSTDDPSSPSVNRTATLNMI 120

Query: 1556 SEAVSDKTGNWKHTELEASFKDEQSEKSYVHDDGKPSSVRGK--GDIKVVTEGTELK--- 1392
            SE   +   + +   L+ S  D     S   + G  +S+  +  GD   V   +E K   
Sbjct: 121  SENKIEAGKSEEEVLLQESANDSNGLNSTKGNGGNTTSINQEQVGDTATVENASESKVAI 180

Query: 1391 -----ETHGGQKHKFENGRDGEASREKSNAVEKNTEDKHRREKDLGDSMSSLFANPQ--- 1236
                 E    Q    E  R+G A    ++ V K+   + +     G+  ++  A      
Sbjct: 181  PDRTEEPREEQLQMLEGSRNGRAIGITNDQVNKSESSQEKGTSGSGEENNASNATETNVS 240

Query: 1235 --GKEGFIERGENEKVNK 1188
              G+   I   +NE+ +K
Sbjct: 241  RIGRVSKITDADNEEKSK 258


>ref|XP_002517981.1| micronuclear linker histone polyprotein, putative [Ricinus communis]
            gi|223542963|gb|EEF44499.1| micronuclear linker histone
            polyprotein, putative [Ricinus communis]
          Length = 602

 Score =  119 bits (299), Expect = 3e-24
 Identities = 101/290 (34%), Positives = 139/290 (47%), Gaps = 16/290 (5%)
 Frame = -1

Query: 2006 HKLRERRIFTXXXXXXXXXXXXXXXXXXKERESAKEMKRKVEELKAKTYSLRTQKMELIN 1827
            HKLRERRIF                   KE+E  KEMKRK EE+KAK YSLR QKME   
Sbjct: 37   HKLRERRIFNLLVKEKDSQLISLHLLLQKEKEYNKEMKRKTEEMKAKIYSLRNQKMETER 96

Query: 1826 KVAAMQAISSAIKEEKRELETTVAEKQNEINKLQQMKIDSNKENSQVAALRELLKQKETE 1647
            ++  +Q+   ++K+E + +E+ + EKQNEIN   +  +   KE +Q+ AL E LKQ+E E
Sbjct: 97   RILELQSTIDSLKDEMKIVESALEEKQNEINIHTETSMYPEKE-TQMIALMESLKQREAE 155

Query: 1646 IGQLKHQIEKPTNIWSVSTDDPSNPAV--NLT-SEAVSDKTGNWKHTELEASFKDEQSEK 1476
            I  LK  +E P  I SVST DPSN  +  N+T + A  DKT + +  +     K     +
Sbjct: 156  IEDLKSHLENPLKIPSVSTGDPSNTQLISNVTGNSADGDKTEDRQLHKSTNYSKYLNPTR 215

Query: 1475 SYVHDDGKPSSVRGKGDIKVVTEGTE--------LKETHGGQKHKFENGRDGEASREKSN 1320
                D+     V+G    +V    +E        L     GQ    EN    E  R K  
Sbjct: 216  GNESDNASTRVVKGDNTARVDEARSENKVGITDSLVVNKEGQLEMLENSL--ERLRNK-G 272

Query: 1319 AVEKNTEDKHRREKDLGDSMSSLFANPQGK-----EGFIERGENEKVNKT 1185
            A  K + +  +  KD G   S+L    + K     EG +     EKV++T
Sbjct: 273  APGKESSENGQGNKDEGSQASALGLGEENKFTNVTEGIVSTA--EKVSQT 320


>ref|XP_002329400.1| predicted protein [Populus trichocarpa] gi|222870450|gb|EEF07581.1|
            predicted protein [Populus trichocarpa]
          Length = 507

 Score =  112 bits (279), Expect = 6e-22
 Identities = 81/226 (35%), Positives = 109/226 (48%), Gaps = 6/226 (2%)
 Frame = -1

Query: 1841 MELINKVAAMQAISSAIKEEKRELETTVAEKQNEINKLQQMKIDSNKENSQVAALRELLK 1662
            MEL  +   MQ+   +IK+E++ +E+ + EKQNEI  L++M ID++K N Q+A L E LK
Sbjct: 1    MELDRRQLEMQSTIDSIKDEQKIMESALEEKQNEIKMLREMNIDADKGNLQMADLIESLK 60

Query: 1661 QKETEIGQLKHQIEKPTNIWSVSTDDPSNPAVNLTSEAVSDKTGNWKHTELEASFKDEQS 1482
            QKE EI +LKH +E P   WSVSTDDPS+P +N+T   VS    N  + E++ S K+E+ 
Sbjct: 61   QKEAEIEELKHHLEYPAKKWSVSTDDPSSPPINMT---VSSNMVNEGNIEVDKS-KEEEV 116

Query: 1481 EKSYVHDDGKPSSVRGKGDIKVVTEGTELKETHGGQKHKFENGRDGEAS----REKSNAV 1314
            +      DG     RG G        T       G     EN  +        RE S   
Sbjct: 117  QLHETAYDGNGLDSRGNGG-----NSTSTNLEKQGDTAIVENASESRVGIADRREVSEEK 171

Query: 1313 EKNTEDKHRREKDLGDSMSSLFAN--PQGKEGFIERGENEKVNKTE 1182
            E    D  R    +G      + N   QGK       EN   N TE
Sbjct: 172  ESQKLDGSRNGSSIGIDKDQEYENESSQGKRASGAGEENNTSNATE 217


Top