BLASTX nr result

ID: Coptis21_contig00018185 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018185
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533657.1| conserved hypothetical protein [Ricinus comm...    65   6e-09
ref|NP_001236374.1| uncharacterized protein LOC100527716 [Glycin...    62   4e-08
ref|NP_197230.1| uncharacterized protein [Arabidopsis thaliana] ...    61   8e-08
ref|XP_002310835.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
gb|ABK92656.1| unknown [Populus trichocarpa]                           61   8e-08

>ref|XP_002533657.1| conserved hypothetical protein [Ricinus communis]
           gi|223526452|gb|EEF28728.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 72

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 25/34 (73%), Positives = 29/34 (85%)
 Frame = -2

Query: 312 GDCCGSGCVRCVWDIYYDELEEYNNLVQKKNTSQ 211
           GDCCGSGCVRCVWD+YY+ELEEYN L Q  + S+
Sbjct: 37  GDCCGSGCVRCVWDVYYEELEEYNKLYQSHSDSK 70


>ref|NP_001236374.1| uncharacterized protein LOC100527716 [Glycine max]
           gi|255633034|gb|ACU16872.1| unknown [Glycine max]
          Length = 117

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 24/33 (72%), Positives = 28/33 (84%)
 Frame = -2

Query: 312 GDCCGSGCVRCVWDIYYDELEEYNNLVQKKNTS 214
           GDCCGSGCVRCVWD+YYDELEEYN   ++ + S
Sbjct: 80  GDCCGSGCVRCVWDVYYDELEEYNKRYKQVDPS 112


>ref|NP_197230.1| uncharacterized protein [Arabidopsis thaliana]
           gi|10177073|dbj|BAB10515.1| unnamed protein product
           [Arabidopsis thaliana] gi|17979262|gb|AAL49947.1|
           AT5g17280/MKP11_13 [Arabidopsis thaliana]
           gi|20147183|gb|AAM10308.1| AT5g17280/MKP11_13
           [Arabidopsis thaliana] gi|21592698|gb|AAM64647.1|
           unknown [Arabidopsis thaliana]
           gi|332005025|gb|AED92408.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 135

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 23/33 (69%), Positives = 27/33 (81%)
 Frame = -2

Query: 312 GDCCGSGCVRCVWDIYYDELEEYNNLVQKKNTS 214
           GDCCGSGCVRCVWD+YYDELE+YN  +  +  S
Sbjct: 102 GDCCGSGCVRCVWDVYYDELEDYNKQLSGETKS 134


>ref|XP_002310835.1| predicted protein [Populus trichocarpa] gi|222853738|gb|EEE91285.1|
           predicted protein [Populus trichocarpa]
          Length = 74

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 25/35 (71%), Positives = 31/35 (88%)
 Frame = -2

Query: 312 GDCCGSGCVRCVWDIYYDELEEYNNLVQKKNTSQS 208
           GDCCGSGCVRCVWD+YY+ELEEY+ L  K ++S+S
Sbjct: 41  GDCCGSGCVRCVWDVYYEELEEYDKL-YKSDSSKS 74


>gb|ABK92656.1| unknown [Populus trichocarpa]
          Length = 142

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 25/35 (71%), Positives = 31/35 (88%)
 Frame = -2

Query: 312 GDCCGSGCVRCVWDIYYDELEEYNNLVQKKNTSQS 208
           GDCCGSGCVRCVWD+YY+ELEEY+ L  K ++S+S
Sbjct: 109 GDCCGSGCVRCVWDVYYEELEEYDKL-YKSDSSKS 142


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