BLASTX nr result

ID: Coptis21_contig00018164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018164
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528990.1| conserved hypothetical protein [Ricinus comm...    69   1e-18
gb|AAZ67589.1| 80A08_4 [Brassica rapa subsp. pekinensis]               60   8e-18
ref|XP_002306328.1| predicted protein [Populus trichocarpa] gi|2...    67   5e-17
gb|AAN59771.1| Unknown protein [Oryza sativa Japonica Group]           66   6e-17
ref|NP_001049256.1| Os03g0195200 [Oryza sativa Japonica Group] g...    66   6e-17

>ref|XP_002528990.1| conserved hypothetical protein [Ricinus communis]
           gi|223531580|gb|EEF33409.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 285

 Score = 68.9 bits (167), Expect(2) = 1e-18
 Identities = 32/39 (82%), Positives = 36/39 (92%)
 Frame = +2

Query: 2   AFLSLNRELLKAYSECNNSAEIISVQNAWLSQNSRVPRS 118
           AFLSLNRELLKAYSEC NSA+IISVQN WLSQ S+VP++
Sbjct: 183 AFLSLNRELLKAYSECENSADIISVQNGWLSQQSKVPKA 221



 Score = 48.9 bits (115), Expect(2) = 1e-18
 Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
 Frame = +1

Query: 196 ESSEVPVRNETGSDYDSEDGLPPLEKNSNHSIFEQSDSDSEDE-----LPPLEKNMN 351
           +S E     + GS  DSEDGLPPLE+N NH  FE SD D         LP  +KN++
Sbjct: 224 DSEEAETSKDEGSCSDSEDGLPPLERNMNHLNFEDSDEDRPAGLLAMLLPVFQKNLS 280


>gb|AAZ67589.1| 80A08_4 [Brassica rapa subsp. pekinensis]
          Length = 449

 Score = 60.5 bits (145), Expect(2) = 8e-18
 Identities = 25/41 (60%), Positives = 36/41 (87%)
 Frame = +2

Query: 2   AFLSLNRELLKAYSECNNSAEIISVQNAWLSQNSRVPRSPS 124
           AFLSLN+++LK YS+C NSAEIISVQN+WL+Q +++ + P+
Sbjct: 182 AFLSLNKDILKEYSKCENSAEIISVQNSWLTQQTQISKQPA 222



 Score = 54.7 bits (130), Expect(2) = 8e-18
 Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 6/53 (11%)
 Frame = +1

Query: 223 ETGSDYDSEDGLPPLEKNSNHSIFEQSDSDSEDE------LPPLEKNMNRLAL 363
           +   D D +DGLPPLE+N NH I E S+ + E+E      LPPLE+NMN + L
Sbjct: 233 DESEDDDEDDGLPPLERNMNHVISEDSEEEDEEEEEEDDGLPPLERNMNHVKL 285


>ref|XP_002306328.1| predicted protein [Populus trichocarpa] gi|222855777|gb|EEE93324.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score = 67.4 bits (163), Expect(2) = 5e-17
 Identities = 32/41 (78%), Positives = 36/41 (87%)
 Frame = +2

Query: 2   AFLSLNRELLKAYSECNNSAEIISVQNAWLSQNSRVPRSPS 124
           AFLSLNRELLK+YSEC NSAEIISVQNAWL+Q   VP++ S
Sbjct: 132 AFLSLNRELLKSYSECGNSAEIISVQNAWLTQQREVPKAVS 172



 Score = 45.1 bits (105), Expect(2) = 5e-17
 Identities = 19/30 (63%), Positives = 24/30 (80%)
 Frame = +1

Query: 229 GSDYDSEDGLPPLEKNSNHSIFEQSDSDSE 318
           GS  DSEDGLPPLE+N NH  F++S+ +SE
Sbjct: 184 GSSNDSEDGLPPLERNMNHLNFQESEDESE 213


>gb|AAN59771.1| Unknown protein [Oryza sativa Japonica Group]
          Length = 327

 Score = 66.2 bits (160), Expect(2) = 6e-17
 Identities = 29/40 (72%), Positives = 35/40 (87%)
 Frame = +2

Query: 2   AFLSLNRELLKAYSECNNSAEIISVQNAWLSQNSRVPRSP 121
           +FLS+NRELLKAYS+C N  EII+VQN+WLS NS VP+SP
Sbjct: 239 SFLSVNRELLKAYSQCENGTEIINVQNSWLSSNSNVPKSP 278



 Score = 45.8 bits (107), Expect(2) = 6e-17
 Identities = 20/33 (60%), Positives = 23/33 (69%)
 Frame = +1

Query: 223 ETGSDYDSEDGLPPLEKNSNHSIFEQSDSDSED 321
           E GSD DS+DGLPPLE+N NH  F Q D   E+
Sbjct: 290 EEGSDADSDDGLPPLEENLNHLNFNQDDESEEE 322


>ref|NP_001049256.1| Os03g0195200 [Oryza sativa Japonica Group]
           gi|108706647|gb|ABF94442.1| Possible metal-binding
           domain in RNase L inhibitor, RLI family protein,
           expressed [Oryza sativa Japonica Group]
           gi|113547727|dbj|BAF11170.1| Os03g0195200 [Oryza sativa
           Japonica Group] gi|215697184|dbj|BAG91178.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218192253|gb|EEC74680.1| hypothetical protein
           OsI_10371 [Oryza sativa Indica Group]
           gi|222624365|gb|EEE58497.1| hypothetical protein
           OsJ_09762 [Oryza sativa Japonica Group]
          Length = 272

 Score = 66.2 bits (160), Expect(2) = 6e-17
 Identities = 29/40 (72%), Positives = 35/40 (87%)
 Frame = +2

Query: 2   AFLSLNRELLKAYSECNNSAEIISVQNAWLSQNSRVPRSP 121
           +FLS+NRELLKAYS+C N  EII+VQN+WLS NS VP+SP
Sbjct: 184 SFLSVNRELLKAYSQCENGTEIINVQNSWLSSNSNVPKSP 223



 Score = 45.8 bits (107), Expect(2) = 6e-17
 Identities = 20/33 (60%), Positives = 23/33 (69%)
 Frame = +1

Query: 223 ETGSDYDSEDGLPPLEKNSNHSIFEQSDSDSED 321
           E GSD DS+DGLPPLE+N NH  F Q D   E+
Sbjct: 235 EEGSDADSDDGLPPLEENLNHLNFNQDDESEEE 267


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