BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018134
         (620 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274240.1| PREDICTED: WD repeat-containing protein 13 [...   135   7e-60
ref|XP_002306125.1| predicted protein [Populus trichocarpa] gi|2...   125   4e-55
ref|XP_002512961.1| WD-repeat protein, putative [Ricinus communi...   120   1e-52
ref|XP_004150062.1| PREDICTED: WD repeat-containing protein 13-l...   116   2e-49
ref|XP_002886225.1| transducin family protein [Arabidopsis lyrat...   119   1e-47

>ref|XP_002274240.1| PREDICTED: WD repeat-containing protein 13 [Vitis vinifera]
           gi|297744762|emb|CBI38024.3| unnamed protein product
           [Vitis vinifera]
          Length = 477

 Score =  135 bits (340), Expect(2) = 7e-60
 Identities = 67/94 (71%), Positives = 73/94 (77%)
 Frame = +3

Query: 339 SGRWVPSPAPLSMLFEVESWSSSRDLRGLNQASSHCTXXXXXXXXXXXXXXKVEPAYSFV 518
           SGRW+PSPAPLS+LFEV+SWSSSRDLR   QASSH T              KVEPAYSFV
Sbjct: 97  SGRWIPSPAPLSLLFEVDSWSSSRDLRSGYQASSHRTSFSSSASDNDPPVRKVEPAYSFV 156

Query: 519 GMHCIFDTCKSSVTVLKFGRMSSNLLAYGASDGT 620
           GMHCIFD CK+SVTVLKFG  SS+LLAYGA+DGT
Sbjct: 157 GMHCIFDQCKASVTVLKFGNKSSDLLAYGAADGT 190



 Score =  121 bits (303), Expect(2) = 7e-60
 Identities = 63/94 (67%), Positives = 68/94 (72%), Gaps = 5/94 (5%)
 Frame = +1

Query: 1   EKSSKRMEEDTVENKKNDEAELFSCILQPISPDSDLNYVGIRRLLLYKKAQSGVDRRKDW 180
           EKSS   EE    N K  +   FSC+LQP S DSD  Y+GIRRLLL +KA+SGV RRKDW
Sbjct: 7   EKSSSSEEE----NNKAVDPTFFSCLLQPSSADSDPQYIGIRRLLLRRKAESGVHRRKDW 62

Query: 181 RCNGKGYVAYRNYIRRPRNWE-----SGQSTPGQ 267
           RCNGKGYVAYRNYIRRPRNWE     S  STPGQ
Sbjct: 63  RCNGKGYVAYRNYIRRPRNWESLHAPSHSSTPGQ 96


>ref|XP_002306125.1| predicted protein [Populus trichocarpa] gi|222849089|gb|EEE86636.1|
           predicted protein [Populus trichocarpa]
          Length = 508

 Score =  125 bits (315), Expect(2) = 4e-55
 Identities = 57/84 (67%), Positives = 70/84 (83%), Gaps = 3/84 (3%)
 Frame = +1

Query: 22  EEDTVENKKNDEAELFSCILQPISPDSDLNYVGIRRLLLYKKAQSGVDRRKDWRCNGKGY 201
           +E+  + KKN + ELFSC+LQP++ DSD +Y+GIRRLLLY+KA+SGV RR DWRCNGKGY
Sbjct: 36  DEENKDKKKNVDPELFSCLLQPVTSDSDPDYIGIRRLLLYRKAESGVRRRLDWRCNGKGY 95

Query: 202 VAYRNYIRRPRNWE---SGQSTPG 264
            +YRNYIRRPRNW+   S QSTPG
Sbjct: 96  TSYRNYIRRPRNWDGLPSHQSTPG 119



 Score =  115 bits (287), Expect(2) = 4e-55
 Identities = 59/95 (62%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
 Frame = +3

Query: 339 SGRWVPSPAPLSMLFEVESWSSSRDLRGLNQASSHCTXXXXXXXXXXXXXXK-VEPAYSF 515
           SGRW+ S  P S LFEV+SW+SSRDLR  N  S+H T              +  EPAYSF
Sbjct: 121 SGRWLQSTTPPSHLFEVDSWTSSRDLRSTNLPSTHRTSFSSTASDNDSLRRRGAEPAYSF 180

Query: 516 VGMHCIFDTCKSSVTVLKFGRMSSNLLAYGASDGT 620
           VGMHCIFD CK++VTVLKFG MSS+LLAYGASDGT
Sbjct: 181 VGMHCIFDQCKAAVTVLKFGHMSSDLLAYGASDGT 215


>ref|XP_002512961.1| WD-repeat protein, putative [Ricinus communis]
           gi|223547972|gb|EEF49464.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 500

 Score =  120 bits (300), Expect(2) = 1e-52
 Identities = 56/84 (66%), Positives = 66/84 (78%), Gaps = 5/84 (5%)
 Frame = +1

Query: 28  DTVENKKNDEAELFSCILQPISPDSDLNYVGIRRLLLYKKAQSGVDRRKDWRCNGKGYVA 207
           D  E K   + ELFSC+LQP++ DSD  Y+GIRRLLLY+K+ SGV+RR DWRCNGKGYV+
Sbjct: 30  DNNEKKNKVDPELFSCLLQPVTTDSDPEYIGIRRLLLYRKSDSGVNRRLDWRCNGKGYVS 89

Query: 208 YRNYIRRPRNWE-----SGQSTPG 264
           YRNYIRRPRNWE     S Q+TPG
Sbjct: 90  YRNYIRRPRNWENQQIPSLQTTPG 113



 Score =  112 bits (280), Expect(2) = 1e-52
 Identities = 61/96 (63%), Positives = 70/96 (72%), Gaps = 2/96 (2%)
 Frame = +3

Query: 339 SGRWVPSPAP-LSMLFEVESWSSSRDLRGLNQASSHCTXXXXXXXXXXXXXXK-VEPAYS 512
           SGRW+  P+P LS +F+ ESWSSSR+L G N AS+H T              + VEPAYS
Sbjct: 115 SGRWLQCPSPPLSHMFDAESWSSSRNLSG-NLASTHRTSFSSSVSDNDRPRRRGVEPAYS 173

Query: 513 FVGMHCIFDTCKSSVTVLKFGRMSSNLLAYGASDGT 620
           FVGMHCIFD CKS+VTVLKFG MSSNLLAYGASDG+
Sbjct: 174 FVGMHCIFDQCKSAVTVLKFGHMSSNLLAYGASDGS 209


>ref|XP_004150062.1| PREDICTED: WD repeat-containing protein 13-like [Cucumis sativus]
           gi|449519860|ref|XP_004166952.1| PREDICTED: WD
           repeat-containing protein 13-like [Cucumis sativus]
          Length = 490

 Score =  116 bits (290), Expect(2) = 2e-49
 Identities = 58/96 (60%), Positives = 71/96 (73%), Gaps = 8/96 (8%)
 Frame = +1

Query: 1   EKSSKRMEEDTVE---NKKNDEAELFSCILQPISPDSDLNYVGIRRLLLYKKAQSGVDRR 171
           E  S   E + VE   +KKN + EL SC+LQP+S   D +Y+GIRRLLLY+KA++ + RR
Sbjct: 17  EDGSSMKEGEEVEKEKSKKNVDPELLSCLLQPMSIGVDPDYIGIRRLLLYRKAEAAIFRR 76

Query: 172 KDWRCNGKGYVAYRNYIRRPRNWESG-----QSTPG 264
           KDWRCNGKGYVA+RN+IRRPRNWES      QSTPG
Sbjct: 77  KDWRCNGKGYVAFRNFIRRPRNWESSRLPSLQSTPG 112



 Score =  105 bits (262), Expect(2) = 2e-49
 Identities = 54/94 (57%), Positives = 67/94 (71%)
 Frame = +3

Query: 339 SGRWVPSPAPLSMLFEVESWSSSRDLRGLNQASSHCTXXXXXXXXXXXXXXKVEPAYSFV 518
           SGRWVP  +PLS+L EVESW+SS+DL+   ++S   +              +VE AYSFV
Sbjct: 114 SGRWVPPQSPLSLLHEVESWTSSKDLQSHRRSSFSSSASDNSQLQTR----RVEFAYSFV 169

Query: 519 GMHCIFDTCKSSVTVLKFGRMSSNLLAYGASDGT 620
           GMHCIFD CK++V V+KFG MSS+LLAYGASDGT
Sbjct: 170 GMHCIFDQCKAAVMVVKFGHMSSDLLAYGASDGT 203


>ref|XP_002886225.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297332065|gb|EFH62484.1| transducin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 482

 Score =  119 bits (298), Expect(2) = 1e-47
 Identities = 62/96 (64%), Positives = 70/96 (72%), Gaps = 2/96 (2%)
 Frame = +3

Query: 339 SGRWVPSPAPLSMLFEVESWSSSRDLRGLNQASSHCTXXXXXXXXXXXXXXK--VEPAYS 512
           SGRW+PSP+PLS  FE ES++SSRDLR +NQ SSH                +  VE AYS
Sbjct: 101 SGRWLPSPSPLSHQFEAESFTSSRDLRSVNQVSSHRASFSSSLSDGDNSYRRGGVEHAYS 160

Query: 513 FVGMHCIFDTCKSSVTVLKFGRMSSNLLAYGASDGT 620
           FVGMHCIFD CKSSVTVLKFG MSS+LLAYGASDG+
Sbjct: 161 FVGMHCIFDQCKSSVTVLKFGHMSSDLLAYGASDGS 196



 Score = 96.3 bits (238), Expect(2) = 1e-47
 Identities = 43/77 (55%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
 Frame = +1

Query: 19  MEEDTVENKKNDEAELFSCILQPISPDSDLNYVGIRRLLLYKKAQSGV-DRRKDWRCNGK 195
           +E+D  + K++ + E  SC++QP + +SD  Y+GIRR+LL++KA+SGV  RR DWRCNGK
Sbjct: 13  VEKDEAK-KQSKDPEFISCMMQPATAESDPQYIGIRRILLHRKAESGVISRRYDWRCNGK 71

Query: 196 GYVAYRNYIRRPRNWES 246
           GYVAYRN+I +PR WE+
Sbjct: 72  GYVAYRNFISKPRKWEN 88