BLASTX nr result

ID: Coptis21_contig00018049 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018049
         (712 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277843.1| PREDICTED: uncharacterized protein LOC100262...   100   3e-19
emb|CBI37868.3| unnamed protein product [Vitis vinifera]               96   6e-18
ref|XP_002313706.1| predicted protein [Populus trichocarpa] gi|2...    92   8e-17
ref|NP_001078493.1| SBP (S-ribonuclease binding protein) family ...    89   9e-16
ref|NP_195233.2| SBP (S-ribonuclease binding protein) family pro...    89   9e-16

>ref|XP_002277843.1| PREDICTED: uncharacterized protein LOC100262284 [Vitis vinifera]
          Length = 286

 Score =  100 bits (249), Expect = 3e-19
 Identities = 77/180 (42%), Positives = 94/180 (52%), Gaps = 12/180 (6%)
 Frame = -2

Query: 504 MAVQAQ---HLVGFSLFGGASQDWMETG------GGFNEFYXXXXXXXXXXXXXXXXXXQ 352
           MA+QAQ     +GFSL  G SQ+W++ G        FN                     Q
Sbjct: 1   MAIQAQLYSENLGFSL--GGSQEWVDNGCVGFNGSCFNLQQHQQQYMQQLQSQQEQIQSQ 58

Query: 351 RNNQVL---GQVVDPTDSNSYSYSDVPSMGFSQSLLASQFEKQRQEIDRFIALQNERLRA 181
           RN Q       ++  T  NS      P+ G S SL ASQF+ QRQEID+FI LQ+ERLR 
Sbjct: 59  RNYQNFFLDNSLMGSTLKNS------PNYGSSHSL-ASQFDNQRQEIDQFITLQSERLRL 111

Query: 180 TXXXXXXXXXXXXXXXXESKTQNLLRQKDEELAKASRKTMELEDCIRKVDMENQAWQRVA 1
                            ESK   LLRQKDEE+AKA+ + MELED +RK++MENQAWQRVA
Sbjct: 112 VLQEQRKQQLAALMRKVESKALALLRQKDEEIAKATNRAMELEDFLRKLEMENQAWQRVA 171


>emb|CBI37868.3| unnamed protein product [Vitis vinifera]
          Length = 216

 Score = 96.3 bits (238), Expect = 6e-18
 Identities = 54/94 (57%), Positives = 64/94 (68%)
 Frame = -2

Query: 282 PSMGFSQSLLASQFEKQRQEIDRFIALQNERLRATXXXXXXXXXXXXXXXXESKTQNLLR 103
           P+ G S SL ASQF+ QRQEID+FI LQ+ERLR                  ESK   LLR
Sbjct: 9   PNYGSSHSL-ASQFDNQRQEIDQFITLQSERLRLVLQEQRKQQLAALMRKVESKALALLR 67

Query: 102 QKDEELAKASRKTMELEDCIRKVDMENQAWQRVA 1
           QKDEE+AKA+ + MELED +RK++MENQAWQRVA
Sbjct: 68  QKDEEIAKATNRAMELEDFLRKLEMENQAWQRVA 101


>ref|XP_002313706.1| predicted protein [Populus trichocarpa] gi|222850114|gb|EEE87661.1|
           predicted protein [Populus trichocarpa]
          Length = 291

 Score = 92.4 bits (228), Expect = 8e-17
 Identities = 63/172 (36%), Positives = 88/172 (51%), Gaps = 4/172 (2%)
 Frame = -2

Query: 504 MAVQAQHLVGFSLFGGASQDWMETG-GGFNEFYXXXXXXXXXXXXXXXXXXQRNNQVLGQ 328
           MA++AQ    F   GG+ QDWM+ G GG N+ +                     N  L +
Sbjct: 1   MAIEAQ----FPFCGGSQQDWMDYGCGGLNQHFNVQQQKQQQLQQCNMHQL--QNYQLQR 54

Query: 327 VVDPTDSN---SYSYSDVPSMGFSQSLLASQFEKQRQEIDRFIALQNERLRATXXXXXXX 157
             D    N   S S ++  +   S   LAS  EKQRQEID +I LQNERLR         
Sbjct: 55  NQDLFSDNTLVSASKNNCNTSNLSMGTLASYDEKQRQEIDHYIRLQNERLRLVLQEQKRQ 114

Query: 156 XXXXXXXXXESKTQNLLRQKDEELAKASRKTMELEDCIRKVDMENQAWQRVA 1
                    ESK   +L+QKDEE+A+A+++T+EL + ++K++ ENQ WQR+A
Sbjct: 115 QLGLLLKKLESKALPILKQKDEEIAQAAKRTVELGEFLKKLEFENQTWQRMA 166


>ref|NP_001078493.1| SBP (S-ribonuclease binding protein) family protein [Arabidopsis
           thaliana] gi|332661058|gb|AEE86458.1| SBP
           (S-ribonuclease binding protein) family protein
           [Arabidopsis thaliana]
          Length = 210

 Score = 89.0 bits (219), Expect = 9e-16
 Identities = 47/89 (52%), Positives = 59/89 (66%)
 Frame = -2

Query: 267 SQSLLASQFEKQRQEIDRFIALQNERLRATXXXXXXXXXXXXXXXXESKTQNLLRQKDEE 88
           SQS LA+Q EKQ+QEID+FI +QNERLR                  ESK   L+ QK+EE
Sbjct: 15  SQSFLAAQMEKQKQEIDQFIKIQNERLRYVLQEQRKREMEMILRKMESKALLLMSQKEEE 74

Query: 87  LAKASRKTMELEDCIRKVDMENQAWQRVA 1
           ++KA  K MELED +RK++MENQ WQR+A
Sbjct: 75  MSKALNKNMELEDLLRKMEMENQTWQRMA 103


>ref|NP_195233.2| SBP (S-ribonuclease binding protein) family protein [Arabidopsis
           thaliana] gi|51536446|gb|AAU05461.1| At4g35070
           [Arabidopsis thaliana] gi|51972074|gb|AAU15141.1|
           At4g35070 [Arabidopsis thaliana]
           gi|110738622|dbj|BAF01236.1| hypothetical protein
           [Arabidopsis thaliana] gi|332661057|gb|AEE86457.1| SBP
           (S-ribonuclease binding protein) family protein
           [Arabidopsis thaliana]
          Length = 265

 Score = 89.0 bits (219), Expect = 9e-16
 Identities = 47/89 (52%), Positives = 59/89 (66%)
 Frame = -2

Query: 267 SQSLLASQFEKQRQEIDRFIALQNERLRATXXXXXXXXXXXXXXXXESKTQNLLRQKDEE 88
           SQS LA+Q EKQ+QEID+FI +QNERLR                  ESK   L+ QK+EE
Sbjct: 70  SQSFLAAQMEKQKQEIDQFIKIQNERLRYVLQEQRKREMEMILRKMESKALLLMSQKEEE 129

Query: 87  LAKASRKTMELEDCIRKVDMENQAWQRVA 1
           ++KA  K MELED +RK++MENQ WQR+A
Sbjct: 130 MSKALNKNMELEDLLRKMEMENQTWQRMA 158


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