BLASTX nr result

ID: Coptis21_contig00018034 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018034
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137085.1| PREDICTED: DNA polymerase kappa-like [Cucumi...   185   3e-45
emb|CBI22452.3| unnamed protein product [Vitis vinifera]              183   1e-44
ref|XP_002264518.1| PREDICTED: DNA polymerase kappa-like [Vitis ...   183   1e-44
ref|XP_003538172.1| PREDICTED: DNA polymerase kappa-like [Glycin...   183   1e-44
ref|XP_002300273.1| predicted protein [Populus trichocarpa] gi|2...   174   7e-42

>ref|XP_004137085.1| PREDICTED: DNA polymerase kappa-like [Cucumis sativus]
           gi|449495765|ref|XP_004159938.1| PREDICTED: DNA
           polymerase kappa-like [Cucumis sativus]
          Length = 693

 Score =  185 bits (470), Expect = 3e-45
 Identities = 90/107 (84%), Positives = 99/107 (92%)
 Frame = +2

Query: 2   KYFENEERKEAFIKQKIENMRAQCANLTAADISRYQKVADKRIIELEVTRDLSKTWLHVD 181
           KYFENEERKEA I++KIENMRA+CA LTA D+S+YQKVADKRI+ELE TRDLS+ WLHVD
Sbjct: 48  KYFENEERKEATIREKIENMRARCAQLTATDLSQYQKVADKRILELESTRDLSRIWLHVD 107

Query: 182 MDAFYAAVETLHNPLLSGKPMAVGCMSMISTANYEARKFGVRAAMPG 322
           MDAFYAAVETL NPLL GKPMAVG MSM+STANYEARK+GVRAAMPG
Sbjct: 108 MDAFYAAVETLSNPLLKGKPMAVGSMSMLSTANYEARKYGVRAAMPG 154


>emb|CBI22452.3| unnamed protein product [Vitis vinifera]
          Length = 704

 Score =  183 bits (465), Expect = 1e-44
 Identities = 90/107 (84%), Positives = 98/107 (91%)
 Frame = +2

Query: 2   KYFENEERKEAFIKQKIENMRAQCANLTAADISRYQKVADKRIIELEVTRDLSKTWLHVD 181
           KYFENEERKEAFI+QKI+NMRA+CA L+A+DIS YQ VADKRI+ELE TRDLS+ WLHVD
Sbjct: 52  KYFENEERKEAFIRQKIDNMRARCAKLSASDISHYQMVADKRILELEATRDLSRIWLHVD 111

Query: 182 MDAFYAAVETLHNPLLSGKPMAVGCMSMISTANYEARKFGVRAAMPG 322
           MDAFYAAVETL NP L G+PMAVG MSMISTANYEARKFGVRAAMPG
Sbjct: 112 MDAFYAAVETLDNPSLRGRPMAVGGMSMISTANYEARKFGVRAAMPG 158


>ref|XP_002264518.1| PREDICTED: DNA polymerase kappa-like [Vitis vinifera]
          Length = 661

 Score =  183 bits (465), Expect = 1e-44
 Identities = 90/107 (84%), Positives = 98/107 (91%)
 Frame = +2

Query: 2   KYFENEERKEAFIKQKIENMRAQCANLTAADISRYQKVADKRIIELEVTRDLSKTWLHVD 181
           KYFENEERKEAFI+QKI+NMRA+CA L+A+DIS YQ VADKRI+ELE TRDLS+ WLHVD
Sbjct: 52  KYFENEERKEAFIRQKIDNMRARCAKLSASDISHYQMVADKRILELEATRDLSRIWLHVD 111

Query: 182 MDAFYAAVETLHNPLLSGKPMAVGCMSMISTANYEARKFGVRAAMPG 322
           MDAFYAAVETL NP L G+PMAVG MSMISTANYEARKFGVRAAMPG
Sbjct: 112 MDAFYAAVETLDNPSLRGRPMAVGGMSMISTANYEARKFGVRAAMPG 158


>ref|XP_003538172.1| PREDICTED: DNA polymerase kappa-like [Glycine max]
          Length = 663

 Score =  183 bits (464), Expect = 1e-44
 Identities = 87/107 (81%), Positives = 97/107 (90%)
 Frame = +2

Query: 2   KYFENEERKEAFIKQKIENMRAQCANLTAADISRYQKVADKRIIELEVTRDLSKTWLHVD 181
           KYF+NEERKEAFIKQKI+N+R QCANLT  D++ YQKVAD+RI+ELE +RDLS+ WLHVD
Sbjct: 47  KYFQNEERKEAFIKQKIDNLRIQCANLTQEDLAHYQKVADRRIVELEASRDLSRIWLHVD 106

Query: 182 MDAFYAAVETLHNPLLSGKPMAVGCMSMISTANYEARKFGVRAAMPG 322
           MDAFYAAVETL NP L GKPMAVG MSM+STANYEARKFGVRAAMPG
Sbjct: 107 MDAFYAAVETLSNPTLKGKPMAVGSMSMLSTANYEARKFGVRAAMPG 153


>ref|XP_002300273.1| predicted protein [Populus trichocarpa] gi|222847531|gb|EEE85078.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score =  174 bits (441), Expect = 7e-42
 Identities = 85/107 (79%), Positives = 95/107 (88%)
 Frame = +2

Query: 2   KYFENEERKEAFIKQKIENMRAQCANLTAADISRYQKVADKRIIELEVTRDLSKTWLHVD 181
           KYFENEE+KEA ++QKIENMRAQ A L+AAD+S YQ VAD+RI+ELE  RDLS+ WLHVD
Sbjct: 22  KYFENEEKKEALLRQKIENMRAQSAKLSAADLSHYQTVADRRILELEAMRDLSRIWLHVD 81

Query: 182 MDAFYAAVETLHNPLLSGKPMAVGCMSMISTANYEARKFGVRAAMPG 322
           MDAFYAAVETL NP L GKPMAVG +SMISTANYEAR+FGVRAAMPG
Sbjct: 82  MDAFYAAVETLSNPSLKGKPMAVGGLSMISTANYEARRFGVRAAMPG 128


Top