BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018007
         (741 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168269.1| PREDICTED: exosome component 10-like [Cucumi...   200   2e-49
ref|XP_004149112.1| PREDICTED: exosome component 10-like [Cucumi...   200   2e-49
dbj|BAC43334.1| putative nucleolar protein [Arabidopsis thaliana]     177   2e-42
ref|NP_198440.2| exosome complex exonuclease RRP6 [Arabidopsis t...   177   2e-42
ref|XP_002870452.1| hypothetical protein ARALYDRAFT_355577 [Arab...   173   3e-41

>ref|XP_004168269.1| PREDICTED: exosome component 10-like [Cucumis sativus]
          Length = 935

 Score =  200 bits (509), Expect = 2e-49
 Identities = 98/186 (52%), Positives = 127/186 (68%), Gaps = 1/186 (0%)
 Frame = +1

Query: 187 RGIPSNEDFHFYYNFNEFKNPIKELVKKTDSTLKQISSSTNQVLGKVYNFPDDVDDVYDW 366
           R IP+ +DFHFYYNF+EFK PI+ + +++ S L+ I SS  +V GK   FP+D DD YDW
Sbjct: 34  RAIPAEKDFHFYYNFDEFKIPIRTIERQSQSMLETIGSSA-EVWGKEMAFPEDTDDAYDW 92

Query: 367 LVNINDELFERFDVSADEFQKVRKMEEE-SGKRVCEVDDDESGFQLVYXXXXXXXXXXXX 543
           LVN+NDE+FERFDVS DEFQK+RK EEE SG+ +    D + GFQLV             
Sbjct: 93  LVNVNDEIFERFDVSLDEFQKIRKEEEEESGRALALTADPDDGFQLVCGKKKKTPTHEDE 152

Query: 544 XXXXXSTSLVKTVTKDARTSGARARIPFHIPSITKPQCEFKIAVDNSNEPFEHVWLEKSE 723
                  S VK  TKD +T G + ++PFHIP+I +PQ EF I V+NSN+PFEHVWL++SE
Sbjct: 153 MHDSSFESSVKVATKDRKTLGVKPKVPFHIPTIRRPQDEFNILVNNSNQPFEHVWLQRSE 212

Query: 724 DGSKFI 741
           DG +F+
Sbjct: 213 DGIRFV 218


>ref|XP_004149112.1| PREDICTED: exosome component 10-like [Cucumis sativus]
          Length = 936

 Score =  200 bits (509), Expect = 2e-49
 Identities = 98/186 (52%), Positives = 127/186 (68%), Gaps = 1/186 (0%)
 Frame = +1

Query: 187 RGIPSNEDFHFYYNFNEFKNPIKELVKKTDSTLKQISSSTNQVLGKVYNFPDDVDDVYDW 366
           R IP+ +DFHFYYNF+EFK PI+ + +++ S L+ I SS  +V GK   FP+D DD YDW
Sbjct: 34  RAIPAEKDFHFYYNFDEFKIPIRTIERQSQSMLETIGSSA-EVWGKEMAFPEDTDDAYDW 92

Query: 367 LVNINDELFERFDVSADEFQKVRKMEEE-SGKRVCEVDDDESGFQLVYXXXXXXXXXXXX 543
           LVN+NDE+FERFDVS DEFQK+RK EEE SG+ +    D + GFQLV             
Sbjct: 93  LVNVNDEIFERFDVSLDEFQKIRKEEEEESGRALALTADPDDGFQLVCGKKKKTPTHEDE 152

Query: 544 XXXXXSTSLVKTVTKDARTSGARARIPFHIPSITKPQCEFKIAVDNSNEPFEHVWLEKSE 723
                  S VK  TKD +T G + ++PFHIP+I +PQ EF I V+NSN+PFEHVWL++SE
Sbjct: 153 MHDSSFESSVKVATKDRKTLGVKPKVPFHIPTIRRPQDEFNILVNNSNQPFEHVWLQRSE 212

Query: 724 DGSKFI 741
           DG +F+
Sbjct: 213 DGIRFV 218


>dbj|BAC43334.1| putative nucleolar protein [Arabidopsis thaliana]
          Length = 578

 Score =  177 bits (449), Expect = 2e-42
 Identities = 96/186 (51%), Positives = 119/186 (63%), Gaps = 6/186 (3%)
 Frame = +1

Query: 187 RGIPSNEDFHFYYNFNEFKNPIKELVKKTDSTLKQISSSTNQVLGKVYNFPDDVDDVY-- 360
           R IP++ DFHFYYNF+EFK PI E+   + STL  I  S  QV GK   FP DVDDVY  
Sbjct: 41  RLIPTSRDFHFYYNFDEFKRPIDEITGTSQSTLATIGDS-EQVWGKSMKFPGDVDDVYAE 99

Query: 361 DWLVNINDELFERFDVSADEFQKVRKMEEESGKRVCEVDDDESGFQLVYXXXXXXXXXXX 540
           DWL N+NDEL ERFDVS DEFQ++RK E+E G+ V   DD + GFQ+VY           
Sbjct: 100 DWLCNVNDELIERFDVSVDEFQRIRKKEKEIGRSVV-ADDGDDGFQMVYGKKKKPVGNVV 158

Query: 541 XXXXXX----STSLVKTVTKDARTSGARARIPFHIPSITKPQCEFKIAVDNSNEPFEHVW 708
                     S   VK   +D  +SG +A++PFH+P+I KPQ E+ I V+N+N PFEHVW
Sbjct: 159 TGSAAVNGGGSVIDVKMAERDKNSSG-KAKVPFHVPTIKKPQEEYNILVNNANLPFEHVW 217

Query: 709 LEKSED 726
           LE+SED
Sbjct: 218 LERSED 223


>ref|NP_198440.2| exosome complex exonuclease RRP6 [Arabidopsis thaliana]
           gi|160892401|gb|ABX52080.1| RRP6-like protein 2
           [Arabidopsis thaliana] gi|332006642|gb|AED94025.1|
           exosome complex exonuclease RRP6 [Arabidopsis thaliana]
          Length = 870

 Score =  177 bits (449), Expect = 2e-42
 Identities = 96/186 (51%), Positives = 119/186 (63%), Gaps = 6/186 (3%)
 Frame = +1

Query: 187 RGIPSNEDFHFYYNFNEFKNPIKELVKKTDSTLKQISSSTNQVLGKVYNFPDDVDDVY-- 360
           R IP++ DFHFYYNF+EFK PI E+   + STL  I  S  QV GK   FP DVDDVY  
Sbjct: 41  RLIPTSRDFHFYYNFDEFKRPIDEITGTSQSTLATIGDS-EQVWGKSMKFPGDVDDVYAE 99

Query: 361 DWLVNINDELFERFDVSADEFQKVRKMEEESGKRVCEVDDDESGFQLVYXXXXXXXXXXX 540
           DWL N+NDEL ERFDVS DEFQ++RK E+E G+ V   DD + GFQ+VY           
Sbjct: 100 DWLCNVNDELIERFDVSVDEFQRIRKKEKEIGRSVV-ADDGDDGFQMVYGKKKKPVGNVV 158

Query: 541 XXXXXX----STSLVKTVTKDARTSGARARIPFHIPSITKPQCEFKIAVDNSNEPFEHVW 708
                     S   VK   +D  +SG +A++PFH+P+I KPQ E+ I V+N+N PFEHVW
Sbjct: 159 TGSAAVNGGGSVIDVKMAERDKNSSG-KAKVPFHVPTIKKPQEEYNILVNNANLPFEHVW 217

Query: 709 LEKSED 726
           LE+SED
Sbjct: 218 LERSED 223


>ref|XP_002870452.1| hypothetical protein ARALYDRAFT_355577 [Arabidopsis lyrata subsp.
           lyrata] gi|297316288|gb|EFH46711.1| hypothetical protein
           ARALYDRAFT_355577 [Arabidopsis lyrata subsp. lyrata]
          Length = 867

 Score =  173 bits (439), Expect = 3e-41
 Identities = 93/187 (49%), Positives = 119/187 (63%), Gaps = 4/187 (2%)
 Frame = +1

Query: 187 RGIPSNEDFHFYYNFNEFKNPIKELVKKTDSTLKQISSSTNQVLGKVYNFPDDVDDV--Y 360
           R IPS+ DFHFYYNF+EFK PI ++   + S L+ I  S  QV GK   FP DVD+V   
Sbjct: 40  RLIPSSRDFHFYYNFDEFKRPIDDIAGSSQSVLETIGDS-EQVWGKSMKFPGDVDEVDAE 98

Query: 361 DWLVNINDELFERFDVSADEFQKVRKMEEESGKRVCEVDDDESGFQLVYXXXXXXXXXXX 540
           DWL N+NDE  ERFDVS DEFQ++RK EEE G+ V    DD  GFQ+VY           
Sbjct: 99  DWLCNVNDEFIERFDVSVDEFQRIRKKEEEIGRPVAYNGDD--GFQMVYGKKKKPVGNVI 156

Query: 541 XXXXXXSTSL--VKTVTKDARTSGARARIPFHIPSITKPQCEFKIAVDNSNEPFEHVWLE 714
                   S+  VK   +D  +SG +A++PFH+P+I KPQ E+ I V+N+N+PFEHVWLE
Sbjct: 157 TGLAANGGSVIDVKMAERDKNSSG-KAKVPFHVPTIKKPQEEYNILVNNANQPFEHVWLE 215

Query: 715 KSEDGSK 735
           +SED  +
Sbjct: 216 RSEDDQR 222