BLASTX nr result

ID: Coptis21_contig00017979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017979
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004160727.1| PREDICTED: transcription factor bHLH51-like ...    59   4e-07
ref|XP_002862876.1| hypothetical protein ARALYDRAFT_497265 [Arab...    56   3e-06
emb|CBI25454.3| unnamed protein product [Vitis vinifera]               56   3e-06
ref|XP_002316199.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|XP_002272668.2| PREDICTED: transcription factor bHLH51-like ...    55   4e-06

>ref|XP_004160727.1| PREDICTED: transcription factor bHLH51-like [Cucumis sativus]
          Length = 247

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 34/63 (53%), Positives = 43/63 (68%), Gaps = 5/63 (7%)
 Frame = +1

Query: 328 ILPWPAQSSTPNFLAQG-YYPSSSSAS----VEDRGATASKSHSQAEKRRRERINGHLST 492
           +LPW      P F +   ++PS S+ S    VEDR A+ASKSHSQAEKRRR+RIN  L+T
Sbjct: 31  LLPWMIN---PQFSSSNEFFPSFSTPSEGIIVEDRAASASKSHSQAEKRRRDRINAQLAT 87

Query: 493 LRR 501
           LR+
Sbjct: 88  LRK 90


>ref|XP_002862876.1| hypothetical protein ARALYDRAFT_497265 [Arabidopsis lyrata subsp.
           lyrata] gi|297308638|gb|EFH39135.1| hypothetical protein
           ARALYDRAFT_497265 [Arabidopsis lyrata subsp. lyrata]
          Length = 242

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 11/71 (15%)
 Frame = +1

Query: 322 PFILPWPAQSSTPN-----------FLAQGYYPSSSSASVEDRGATASKSHSQAEKRRRE 468
           P+++ W  QS +P+           F + GY+P+       ++  + S+SH QAEKRRR+
Sbjct: 16  PYMVSWSLQSESPDSDWSRFNLGFSFSSSGYFPADDCVGGIEKAESLSRSHRQAEKRRRD 75

Query: 469 RINGHLSTLRR 501
           RIN HL+ LR+
Sbjct: 76  RINSHLTALRK 86


>emb|CBI25454.3| unnamed protein product [Vitis vinifera]
          Length = 297

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 42/95 (44%), Positives = 52/95 (54%), Gaps = 9/95 (9%)
 Frame = +1

Query: 244 LFMEKFSRLGWSEEAGQFQYHEVNNEPFILPW-PAQSSTPNFLAQGYYPSSS----SASV 408
           L ME     GW++EA   Q         +LPW P    + +F   G+ PS S      + 
Sbjct: 44  LDMENCLYSGWAQEADCTQCDAAP----VLPWLPPPHVSASFQFHGF-PSWSLPVEKMAT 98

Query: 409 EDRG----ATASKSHSQAEKRRRERINGHLSTLRR 501
           EDR     ATASKSHSQAEKRRR+RIN  L+TLR+
Sbjct: 99  EDRSDERTATASKSHSQAEKRRRDRINAQLATLRK 133


>ref|XP_002316199.1| predicted protein [Populus trichocarpa] gi|222865239|gb|EEF02370.1|
           predicted protein [Populus trichocarpa]
          Length = 259

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 33/68 (48%), Positives = 46/68 (67%), Gaps = 4/68 (5%)
 Frame = +1

Query: 310 VNNEPFILPWPAQSS-TPNFLAQGYYPSSS---SASVEDRGATASKSHSQAEKRRRERIN 477
           V +E F++P P+ +S + NF   G+ PS S     + ED+ A++SKSHSQAEKRRR+RIN
Sbjct: 25  VYDESFLVPCPSHASASANFQVYGF-PSWSVPLQEASEDKAASSSKSHSQAEKRRRDRIN 83

Query: 478 GHLSTLRR 501
             L  LR+
Sbjct: 84  AQLGILRK 91


>ref|XP_002272668.2| PREDICTED: transcription factor bHLH51-like [Vitis vinifera]
          Length = 252

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 41/93 (44%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
 Frame = +1

Query: 250 MEKFSRLGWSEEAGQFQYHEVNNEPFILPW-PAQSSTPNFLAQGYYPSSS----SASVED 414
           ME     GW++EA   Q         +LPW P    + +F   G+ PS S      + ED
Sbjct: 1   MENCLYSGWAQEADCTQCDAAP----VLPWLPPPHVSASFQFHGF-PSWSLPVEKMATED 55

Query: 415 RG----ATASKSHSQAEKRRRERINGHLSTLRR 501
           R     ATASKSHSQAEKRRR+RIN  L+TLR+
Sbjct: 56  RSDERTATASKSHSQAEKRRRDRINAQLATLRK 88


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