BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017970
         (1301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27180.3| unnamed protein product [Vitis vinifera]              408   e-111
ref|XP_002276547.1| PREDICTED: chaperonin 60 subunit alpha 2, ch...   408   e-111
ref|XP_002528171.1| rubisco subunit binding-protein alpha subuni...   398   e-108
ref|XP_004145436.1| PREDICTED: chaperonin 60 subunit alpha 2, ch...   386   e-105
ref|XP_002277357.2| PREDICTED: ruBisCO large subunit-binding pro...   385   e-104

>emb|CBI27180.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  408 bits (1049), Expect = e-111
 Identities = 203/284 (71%), Positives = 244/284 (85%)
 Frame = -1

Query: 1301 EKTAQLSVPLLIIAEDVTTEVLATLIMNKLRGIANVAAIRCPGFGEGKKAILQDIALMTG 1122
            EKT QLSVPLLIIAED++++VL TL++NK++GI NVA ++CPGFGEGKKA+LQDIAL+TG
Sbjct: 279  EKTTQLSVPLLIIAEDISSQVLETLVVNKMQGIINVAVVKCPGFGEGKKALLQDIALLTG 338

Query: 1121 ADFXXXXXXXXXXXXTSDQLGLAQKIIISSDSTTIVADPTTKAEIRARIAQIKKDLSETD 942
            ADF            TSDQLG+A+K+ I+S+STT VADP+TK EI+ARI QIKKDL+ETD
Sbjct: 339  ADFLSGDLGLTLDSATSDQLGIARKVTITSNSTTFVADPSTKPEIQARILQIKKDLAETD 398

Query: 941  SSYLSKKLSERIAKLSGGVAIIKVGAPTEVELEDRKLRIEDAKNATFAAMDEGIAPGGGV 762
            SSYLS+KLSERIAKLSGGVAIIKVGA TE ELEDRKLRIEDAKNATFAAMDEGI PGGG 
Sbjct: 399  SSYLSRKLSERIAKLSGGVAIIKVGAHTETELEDRKLRIEDAKNATFAAMDEGIVPGGGA 458

Query: 761  TFIHLSKYITAIKDCMEDPDERLGADIISKALLIPAFSIASNAGVDGSVVVEKLLACQWQ 582
            T+IHL + I  IK  MEDPDE++GADI++KAL  PA +IA+NAGVDG+VV+EK+  C W+
Sbjct: 459  TYIHLEEQIPIIKHSMEDPDEQIGADIVAKALAAPAKAIATNAGVDGAVVIEKIRTCDWR 518

Query: 581  TGYNALTDKYEDLFDAGVIDPCRVSRCALQNAASIAGILLLTQA 450
            TGY+A+T +Y+DL +AGV+DPCRVSRCALQNA S+AGI+L TQA
Sbjct: 519  TGYDAMTGRYQDLLNAGVVDPCRVSRCALQNAVSVAGIVLTTQA 562


>ref|XP_002276547.1| PREDICTED: chaperonin 60 subunit alpha 2, chloroplastic-like [Vitis
            vinifera]
          Length = 602

 Score =  408 bits (1049), Expect = e-111
 Identities = 203/284 (71%), Positives = 244/284 (85%)
 Frame = -1

Query: 1301 EKTAQLSVPLLIIAEDVTTEVLATLIMNKLRGIANVAAIRCPGFGEGKKAILQDIALMTG 1122
            EKT QLSVPLLIIAED++++VL TL++NK++GI NVA ++CPGFGEGKKA+LQDIAL+TG
Sbjct: 298  EKTTQLSVPLLIIAEDISSQVLETLVVNKMQGIINVAVVKCPGFGEGKKALLQDIALLTG 357

Query: 1121 ADFXXXXXXXXXXXXTSDQLGLAQKIIISSDSTTIVADPTTKAEIRARIAQIKKDLSETD 942
            ADF            TSDQLG+A+K+ I+S+STT VADP+TK EI+ARI QIKKDL+ETD
Sbjct: 358  ADFLSGDLGLTLDSATSDQLGIARKVTITSNSTTFVADPSTKPEIQARILQIKKDLAETD 417

Query: 941  SSYLSKKLSERIAKLSGGVAIIKVGAPTEVELEDRKLRIEDAKNATFAAMDEGIAPGGGV 762
            SSYLS+KLSERIAKLSGGVAIIKVGA TE ELEDRKLRIEDAKNATFAAMDEGI PGGG 
Sbjct: 418  SSYLSRKLSERIAKLSGGVAIIKVGAHTETELEDRKLRIEDAKNATFAAMDEGIVPGGGA 477

Query: 761  TFIHLSKYITAIKDCMEDPDERLGADIISKALLIPAFSIASNAGVDGSVVVEKLLACQWQ 582
            T+IHL + I  IK  MEDPDE++GADI++KAL  PA +IA+NAGVDG+VV+EK+  C W+
Sbjct: 478  TYIHLEEQIPIIKHSMEDPDEQIGADIVAKALAAPAKAIATNAGVDGAVVIEKIRTCDWR 537

Query: 581  TGYNALTDKYEDLFDAGVIDPCRVSRCALQNAASIAGILLLTQA 450
            TGY+A+T +Y+DL +AGV+DPCRVSRCALQNA S+AGI+L TQA
Sbjct: 538  TGYDAMTGRYQDLLNAGVVDPCRVSRCALQNAVSVAGIVLTTQA 581


>ref|XP_002528171.1| rubisco subunit binding-protein alpha subunit, ruba, putative
            [Ricinus communis] gi|223532428|gb|EEF34222.1| rubisco
            subunit binding-protein alpha subunit, ruba, putative
            [Ricinus communis]
          Length = 556

 Score =  398 bits (1023), Expect = e-108
 Identities = 198/284 (69%), Positives = 245/284 (86%)
 Frame = -1

Query: 1301 EKTAQLSVPLLIIAEDVTTEVLATLIMNKLRGIANVAAIRCPGFGEGKKAILQDIALMTG 1122
            EKT QLSVPLLI AED++ +VL TL++NK++G+ NVA ++CPGFGEGKKA+LQDIALMTG
Sbjct: 252  EKTMQLSVPLLIFAEDMSKQVLETLVVNKMQGLLNVAVVKCPGFGEGKKALLQDIALMTG 311

Query: 1121 ADFXXXXXXXXXXXXTSDQLGLAQKIIISSDSTTIVADPTTKAEIRARIAQIKKDLSETD 942
            ADF            TSDQLG+AQK+ I+S+STTIVAD +TKAEI+ARI Q+KKDL+ETD
Sbjct: 312  ADFLSGDFGLTLMGATSDQLGIAQKVTITSNSTTIVADSSTKAEIQARILQMKKDLAETD 371

Query: 941  SSYLSKKLSERIAKLSGGVAIIKVGAPTEVELEDRKLRIEDAKNATFAAMDEGIAPGGGV 762
            + YLS+KLSERIAKLSGGVA+IKVGA TE ELEDRKLRIEDAKNAT+AAMDEGI PGGG 
Sbjct: 372  NKYLSRKLSERIAKLSGGVALIKVGAHTETELEDRKLRIEDAKNATYAAMDEGIVPGGGA 431

Query: 761  TFIHLSKYITAIKDCMEDPDERLGADIISKALLIPAFSIASNAGVDGSVVVEKLLACQWQ 582
             ++HLS+ I+ I+D MED +E++GADI++KALL+PA +IA+NAGVDG+VVVEK+ +  W+
Sbjct: 432  AYVHLSEQISTIQDSMEDENEQIGADIVAKALLVPAKTIATNAGVDGAVVVEKIRSSDWR 491

Query: 581  TGYNALTDKYEDLFDAGVIDPCRVSRCALQNAASIAGILLLTQA 450
             G+NA+T +YEDL DAGV+DPCRVSRCALQ+AASIAG++L TQA
Sbjct: 492  IGFNAMTGEYEDLLDAGVVDPCRVSRCALQSAASIAGLVLTTQA 535


>ref|XP_004145436.1| PREDICTED: chaperonin 60 subunit alpha 2, chloroplastic-like [Cucumis
            sativus]
          Length = 587

 Score =  386 bits (991), Expect = e-105
 Identities = 197/284 (69%), Positives = 234/284 (82%)
 Frame = -1

Query: 1301 EKTAQLSVPLLIIAEDVTTEVLATLIMNKLRGIANVAAIRCPGFGEGKKAILQDIALMTG 1122
            EKT QLS+PLLI AED++ +VL TL++NK++G+ NVA ++CPG GE KKA+LQDIALMTG
Sbjct: 283  EKTVQLSLPLLIFAEDISIKVLETLVVNKIQGLVNVAVVKCPGVGERKKALLQDIALMTG 342

Query: 1121 ADFXXXXXXXXXXXXTSDQLGLAQKIIISSDSTTIVADPTTKAEIRARIAQIKKDLSETD 942
            ADF            TSDQLG+A+K++I+S+STTIVADP+TK EI+ARI+QIKKDL ETD
Sbjct: 343  ADFLSGDLGLGLEGATSDQLGIARKVVITSNSTTIVADPSTKDEIQARISQIKKDLVETD 402

Query: 941  SSYLSKKLSERIAKLSGGVAIIKVGAPTEVELEDRKLRIEDAKNATFAAMDEGIAPGGGV 762
            +  LS+KLSERIAKLSGGVA+IKVGA TEVELEDRKLRIEDAKNA FAAM+EGI PGGG 
Sbjct: 403  NPNLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNAVFAAMNEGIVPGGGA 462

Query: 761  TFIHLSKYITAIKDCMEDPDERLGADIISKALLIPAFSIASNAGVDGSVVVEKLLACQWQ 582
            T++HL + +  IK  MED DE +GADI+ KALL PA  IASNAG DG VVVEK  AC W+
Sbjct: 463  TYVHLYELLPTIKQSMEDQDELIGADIVGKALLAPAKLIASNAGDDGVVVVEKTRACDWR 522

Query: 581  TGYNALTDKYEDLFDAGVIDPCRVSRCALQNAASIAGILLLTQA 450
             GYNA+TDKYEDLF+AGV+DPC VSRCALQ AAS+ GI+L TQA
Sbjct: 523  HGYNAMTDKYEDLFNAGVVDPCLVSRCALQIAASVTGIVLTTQA 566


>ref|XP_002277357.2| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
            chloroplastic-like [Vitis vinifera]
          Length = 586

 Score =  385 bits (988), Expect = e-104
 Identities = 195/284 (68%), Positives = 235/284 (82%)
 Frame = -1

Query: 1301 EKTAQLSVPLLIIAEDVTTEVLATLIMNKLRGIANVAAIRCPGFGEGKKAILQDIALMTG 1122
            EKT QL  PLLI+AEDVT E LATL++NKLRGI NVAAI+ PGFGE +KA+LQDIA+MTG
Sbjct: 282  EKTTQLRSPLLIVAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIMTG 341

Query: 1121 ADFXXXXXXXXXXXXTSDQLGLAQKIIISSDSTTIVADPTTKAEIRARIAQIKKDLSETD 942
            A+F            + +QLGLA+K+ I+ DSTTI+AD  +K EI+ARIAQIKK+L+ETD
Sbjct: 342  AEFQANDLGLLIENTSVEQLGLARKVTITKDSTTIIADAASKDEIQARIAQIKKELAETD 401

Query: 941  SSYLSKKLSERIAKLSGGVAIIKVGAPTEVELEDRKLRIEDAKNATFAAMDEGIAPGGGV 762
            S Y ++KL+ERIAKLSGGVA+IKVGA TE ELEDRKLRIEDAKNATFAA++EGI PGGG 
Sbjct: 402  SVYDTEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGA 461

Query: 761  TFIHLSKYITAIKDCMEDPDERLGADIISKALLIPAFSIASNAGVDGSVVVEKLLACQWQ 582
             F+HLS Y+ AIKD +ED DERLGADI+ KAL+ PA  IA NAGV+G VVVEK+ AC+W 
Sbjct: 462  AFVHLSTYVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKIKACEWA 521

Query: 581  TGYNALTDKYEDLFDAGVIDPCRVSRCALQNAASIAGILLLTQA 450
             GYNA+TDKYE+L +AGVIDP +V+RCALQNAAS+AG++L TQA
Sbjct: 522  VGYNAMTDKYENLVEAGVIDPAKVARCALQNAASVAGMVLTTQA 565