BLASTX nr result

ID: Coptis21_contig00017950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017950
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23729.3| unnamed protein product [Vitis vinifera]              197   6e-49
ref|XP_002282256.1| PREDICTED: uncharacterized protein LOC100266...   197   6e-49
ref|XP_002528340.1| ATP binding protein, putative [Ricinus commu...   194   8e-48
ref|XP_002314510.1| predicted protein [Populus trichocarpa] gi|2...   192   2e-47
dbj|BAB02932.1| unnamed protein product [Arabidopsis thaliana]        188   3e-46

>emb|CBI23729.3| unnamed protein product [Vitis vinifera]
          Length = 1114

 Score =  197 bits (502), Expect = 6e-49
 Identities = 96/131 (73%), Positives = 109/131 (83%)
 Frame = +3

Query: 3   TISSEKRPRPLHLGTATQIGALPTEGIPSLLKVLFPSNCSGLPMLYVRDLLLNPPTFEIA 182
           T+SSEKRPR LHLGTATQIGA+PTEGIP LLKVL PSNC+GLP+LYVRDLLLNPP +EIA
Sbjct: 358 TVSSEKRPRSLHLGTATQIGAIPTEGIPCLLKVLLPSNCTGLPLLYVRDLLLNPPAYEIA 417

Query: 183 VEIQETCKLMSNVMCSIPEFTCVSAAXXXXXXXXXXXNHIEFCRIKNVVDEILQMHRNSE 362
             IQ TC+LM+NV CSIPEFTCVS A           NHIEFCRIK+V+DEILQMHRNS+
Sbjct: 418 SIIQATCRLMNNVTCSIPEFTCVSPAKLVKLLELREANHIEFCRIKSVLDEILQMHRNSD 477

Query: 363 LHRILQLLFKP 395
           L++IL+LL  P
Sbjct: 478 LNKILKLLMDP 488


>ref|XP_002282256.1| PREDICTED: uncharacterized protein LOC100266612 [Vitis vinifera]
          Length = 1144

 Score =  197 bits (502), Expect = 6e-49
 Identities = 96/131 (73%), Positives = 109/131 (83%)
 Frame = +3

Query: 3   TISSEKRPRPLHLGTATQIGALPTEGIPSLLKVLFPSNCSGLPMLYVRDLLLNPPTFEIA 182
           T+SSEKRPR LHLGTATQIGA+PTEGIP LLKVL PSNC+GLP+LYVRDLLLNPP +EIA
Sbjct: 358 TVSSEKRPRSLHLGTATQIGAIPTEGIPCLLKVLLPSNCTGLPLLYVRDLLLNPPAYEIA 417

Query: 183 VEIQETCKLMSNVMCSIPEFTCVSAAXXXXXXXXXXXNHIEFCRIKNVVDEILQMHRNSE 362
             IQ TC+LM+NV CSIPEFTCVS A           NHIEFCRIK+V+DEILQMHRNS+
Sbjct: 418 SIIQATCRLMNNVTCSIPEFTCVSPAKLVKLLELREANHIEFCRIKSVLDEILQMHRNSD 477

Query: 363 LHRILQLLFKP 395
           L++IL+LL  P
Sbjct: 478 LNKILKLLMDP 488


>ref|XP_002528340.1| ATP binding protein, putative [Ricinus communis]
           gi|223532208|gb|EEF34012.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 937

 Score =  194 bits (492), Expect = 8e-48
 Identities = 92/131 (70%), Positives = 106/131 (80%)
 Frame = +3

Query: 3   TISSEKRPRPLHLGTATQIGALPTEGIPSLLKVLFPSNCSGLPMLYVRDLLLNPPTFEIA 182
           T+ S+ RPRPLHLGTATQIGA+PTEGIP LLKVL PSNC+GLP+LYVRDLLLNPP +EIA
Sbjct: 361 TVPSDNRPRPLHLGTATQIGAIPTEGIPCLLKVLLPSNCTGLPVLYVRDLLLNPPAYEIA 420

Query: 183 VEIQETCKLMSNVMCSIPEFTCVSAAXXXXXXXXXXXNHIEFCRIKNVVDEILQMHRNSE 362
             IQ TCKLMS++ CSIPEFTC+S+A           NH+EFCRIKNV+DEIL MHRNSE
Sbjct: 421 STIQATCKLMSSITCSIPEFTCISSAKLVKLLELREANHLEFCRIKNVLDEILHMHRNSE 480

Query: 363 LHRILQLLFKP 395
           L+ IL+ L  P
Sbjct: 481 LNEILKSLMDP 491


>ref|XP_002314510.1| predicted protein [Populus trichocarpa] gi|222863550|gb|EEF00681.1|
           predicted protein [Populus trichocarpa]
          Length = 1130

 Score =  192 bits (489), Expect = 2e-47
 Identities = 94/130 (72%), Positives = 105/130 (80%)
 Frame = +3

Query: 6   ISSEKRPRPLHLGTATQIGALPTEGIPSLLKVLFPSNCSGLPMLYVRDLLLNPPTFEIAV 185
           +SSE RPRPLHLGTATQIGA+PTEGIP LLKVL PSNC+GLP LYVRD+LLNPP +EIA 
Sbjct: 359 VSSENRPRPLHLGTATQIGAIPTEGIPCLLKVLLPSNCTGLPELYVRDMLLNPPAYEIAS 418

Query: 186 EIQETCKLMSNVMCSIPEFTCVSAAXXXXXXXXXXXNHIEFCRIKNVVDEILQMHRNSEL 365
            IQ TCKLMSN+ CSIPEFTCVS+A           NHIEFCRIKNV+DEIL M+RNSEL
Sbjct: 419 TIQATCKLMSNITCSIPEFTCVSSAKLVKLLEQKEANHIEFCRIKNVLDEILFMYRNSEL 478

Query: 366 HRILQLLFKP 395
           + IL+ L  P
Sbjct: 479 NEILKSLMDP 488


>dbj|BAB02932.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1016

 Score =  188 bits (478), Expect = 3e-46
 Identities = 91/130 (70%), Positives = 105/130 (80%)
 Frame = +3

Query: 6   ISSEKRPRPLHLGTATQIGALPTEGIPSLLKVLFPSNCSGLPMLYVRDLLLNPPTFEIAV 185
           + S+ RPRPLHLGTATQIGALPTEGIP LLKVL PS CSGLP LYVRDLLLNPP ++IA+
Sbjct: 257 VPSKNRPRPLHLGTATQIGALPTEGIPCLLKVLLPSTCSGLPSLYVRDLLLNPPAYDIAL 316

Query: 186 EIQETCKLMSNVMCSIPEFTCVSAAXXXXXXXXXXXNHIEFCRIKNVVDEILQMHRNSEL 365
           +IQETCKLMS V CSIPEFTCVS+A           N+IEFCRIKNV+D++L MHR++EL
Sbjct: 317 KIQETCKLMSTVTCSIPEFTCVSSAKLVKLLEQREANYIEFCRIKNVLDDVLHMHRHAEL 376

Query: 366 HRILQLLFKP 395
             IL+LL  P
Sbjct: 377 VEILKLLMDP 386


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