BLASTX nr result
ID: Coptis21_contig00017944
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00017944 (380 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002269842.1| PREDICTED: WD repeat-containing protein 55 [... 70 1e-10 ref|XP_002966476.1| hypothetical protein SELMODRAFT_168086 [Sela... 69 3e-10 ref|XP_002271081.1| PREDICTED: WD repeat-containing protein 55 [... 69 3e-10 ref|XP_003545509.1| PREDICTED: T-complex protein 1 subunit eta-l... 69 5e-10 ref|XP_002312854.1| predicted protein [Populus trichocarpa] gi|2... 69 5e-10 >ref|XP_002269842.1| PREDICTED: WD repeat-containing protein 55 [Vitis vinifera] gi|298205166|emb|CBI17225.3| unnamed protein product [Vitis vinifera] Length = 346 Score = 70.5 bits (171), Expect = 1e-10 Identities = 29/35 (82%), Positives = 35/35 (100%) Frame = +3 Query: 135 QVWDTRQRTCCNSFDAHEEYISDMTYAADSLKLLG 239 +VWDTRQ++CCNSFDAHEEYISDMT+A+DS+KLLG Sbjct: 119 KVWDTRQQSCCNSFDAHEEYISDMTFASDSMKLLG 153 >ref|XP_002966476.1| hypothetical protein SELMODRAFT_168086 [Selaginella moellendorffii] gi|302800574|ref|XP_002982044.1| hypothetical protein SELMODRAFT_179309 [Selaginella moellendorffii] gi|300150060|gb|EFJ16712.1| hypothetical protein SELMODRAFT_179309 [Selaginella moellendorffii] gi|300165896|gb|EFJ32503.1| hypothetical protein SELMODRAFT_168086 [Selaginella moellendorffii] Length = 564 Score = 69.3 bits (168), Expect = 3e-10 Identities = 35/49 (71%), Positives = 37/49 (75%), Gaps = 2/49 (4%) Frame = +2 Query: 221 FIETFGN--EVIPRQLCDNAGFDATDVLNKLRQKHALPSVGSV*YGLSV 361 FI F EVIPRQLCDNAGFDATDVLNKLRQKHALPS YG+ + Sbjct: 436 FINAFAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPSGEGALYGVDI 484 >ref|XP_002271081.1| PREDICTED: WD repeat-containing protein 55 [Vitis vinifera] gi|297743547|emb|CBI36414.3| unnamed protein product [Vitis vinifera] Length = 346 Score = 69.3 bits (168), Expect = 3e-10 Identities = 28/35 (80%), Positives = 35/35 (100%) Frame = +3 Query: 135 QVWDTRQRTCCNSFDAHEEYISDMTYAADSLKLLG 239 +VWDTRQ++CCNSFD+HEEYISDMT+A+DS+KLLG Sbjct: 119 KVWDTRQQSCCNSFDSHEEYISDMTFASDSMKLLG 153 >ref|XP_003545509.1| PREDICTED: T-complex protein 1 subunit eta-like [Glycine max] Length = 560 Score = 68.6 bits (166), Expect = 5e-10 Identities = 34/49 (69%), Positives = 38/49 (77%), Gaps = 2/49 (4%) Frame = +2 Query: 221 FIETFGN--EVIPRQLCDNAGFDATDVLNKLRQKHALPSVGSV*YGLSV 361 FI ++ EVIPRQLCDNAGFDATDVLNKLRQKHALPS YG+ + Sbjct: 437 FINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPSGEGAPYGVDI 485 >ref|XP_002312854.1| predicted protein [Populus trichocarpa] gi|222849262|gb|EEE86809.1| predicted protein [Populus trichocarpa] Length = 561 Score = 68.6 bits (166), Expect = 5e-10 Identities = 34/49 (69%), Positives = 38/49 (77%), Gaps = 2/49 (4%) Frame = +2 Query: 221 FIETFGN--EVIPRQLCDNAGFDATDVLNKLRQKHALPSVGSV*YGLSV 361 FI ++ EVIPRQLCDNAGFDATDVLNKLRQKHALPS YG+ + Sbjct: 437 FINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPSGEGAPYGVDI 485