BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017928
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5YLB4.1|GYRB_NICBE RecName: Full=DNA gyrase subunit B, chlor...   151   6e-35
emb|CBI30132.3| unnamed protein product [Vitis vinifera]              149   2e-34
ref|XP_002266668.1| PREDICTED: DNA gyrase subunit B, chloroplast...   149   2e-34
ref|XP_003554124.1| PREDICTED: DNA gyrase subunit B, chloroplast...   148   4e-34
ref|XP_003521129.1| PREDICTED: DNA gyrase subunit B, chloroplast...   148   4e-34

>sp|Q5YLB4.1|GYRB_NICBE RecName: Full=DNA gyrase subunit B, chloroplastic/mitochondrial;
           Flags: Precursor gi|38017095|gb|AAR07943.1| DNA gyrase B
           subunit [Nicotiana benthamiana]
          Length = 731

 Score =  151 bits (381), Expect = 6e-35
 Identities = 79/95 (83%), Positives = 81/95 (85%)
 Frame = +3

Query: 3   CVISVKVPNPEFEGQTKTRLGNPEVRRVVDQSVQEYLTEYLELHPDVLDLILSKSLNXXX 182
           CVISVKVPNPEFEGQTKTRLGNPEVR+VVDQSVQEYLTEYLELHPDVLD ILSKSLN   
Sbjct: 415 CVISVKVPNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLNALK 474

Query: 183 XXXXXXXXXELVRQKSVLKSSSLPGKLADHSATDP 287
                    ELVRQKSVLKSSSLPGKLAD SAT+P
Sbjct: 475 AALAAKRARELVRQKSVLKSSSLPGKLADCSATNP 509



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/34 (91%), Positives = 33/34 (97%)
 Frame = +3

Query: 327 TRLGNPEVQRVVDQSVQEYLTEYLELHPDVLDLI 428
           TRLGNPEV++VVDQSVQEYLTEYLELHPDVLD I
Sbjct: 432 TRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSI 465


>emb|CBI30132.3| unnamed protein product [Vitis vinifera]
          Length = 707

 Score =  149 bits (377), Expect = 2e-34
 Identities = 77/95 (81%), Positives = 82/95 (86%)
 Frame = +3

Query: 3   CVISVKVPNPEFEGQTKTRLGNPEVRRVVDQSVQEYLTEYLELHPDVLDLILSKSLNXXX 182
           CVISVKVPNPEFEGQTKTRLGNPEVR+VVDQ+VQE+LTEYLELHPDVLDLILSKSLN   
Sbjct: 391 CVISVKVPNPEFEGQTKTRLGNPEVRKVVDQTVQEFLTEYLELHPDVLDLILSKSLNALK 450

Query: 183 XXXXXXXXXELVRQKSVLKSSSLPGKLADHSATDP 287
                    ELVRQKSVLKSSSLPGKLAD S+T+P
Sbjct: 451 AALAAKRARELVRQKSVLKSSSLPGKLADCSSTNP 485



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/34 (88%), Positives = 34/34 (100%)
 Frame = +3

Query: 327 TRLGNPEVQRVVDQSVQEYLTEYLELHPDVLDLI 428
           TRLGNPEV++VVDQ+VQE+LTEYLELHPDVLDLI
Sbjct: 408 TRLGNPEVRKVVDQTVQEFLTEYLELHPDVLDLI 441


>ref|XP_002266668.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
           [Vitis vinifera]
          Length = 719

 Score =  149 bits (377), Expect = 2e-34
 Identities = 77/95 (81%), Positives = 82/95 (86%)
 Frame = +3

Query: 3   CVISVKVPNPEFEGQTKTRLGNPEVRRVVDQSVQEYLTEYLELHPDVLDLILSKSLNXXX 182
           CVISVKVPNPEFEGQTKTRLGNPEVR+VVDQ+VQE+LTEYLELHPDVLDLILSKSLN   
Sbjct: 403 CVISVKVPNPEFEGQTKTRLGNPEVRKVVDQTVQEFLTEYLELHPDVLDLILSKSLNALK 462

Query: 183 XXXXXXXXXELVRQKSVLKSSSLPGKLADHSATDP 287
                    ELVRQKSVLKSSSLPGKLAD S+T+P
Sbjct: 463 AALAAKRARELVRQKSVLKSSSLPGKLADCSSTNP 497



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/34 (88%), Positives = 34/34 (100%)
 Frame = +3

Query: 327 TRLGNPEVQRVVDQSVQEYLTEYLELHPDVLDLI 428
           TRLGNPEV++VVDQ+VQE+LTEYLELHPDVLDLI
Sbjct: 420 TRLGNPEVRKVVDQTVQEFLTEYLELHPDVLDLI 453


>ref|XP_003554124.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
           [Glycine max]
          Length = 724

 Score =  148 bits (374), Expect = 4e-34
 Identities = 74/95 (77%), Positives = 81/95 (85%)
 Frame = +3

Query: 3   CVISVKVPNPEFEGQTKTRLGNPEVRRVVDQSVQEYLTEYLELHPDVLDLILSKSLNXXX 182
           CV+SVKVPNPEFEGQTKTRLGNPEVR+VVDQS+QEYLTEYLELHPDVLD +LSK+LN   
Sbjct: 408 CVVSVKVPNPEFEGQTKTRLGNPEVRKVVDQSIQEYLTEYLELHPDVLDSVLSKALNAFK 467

Query: 183 XXXXXXXXXELVRQKSVLKSSSLPGKLADHSATDP 287
                    ELVRQKSVL+SSSLPGKLAD S+TDP
Sbjct: 468 AALAAKRARELVRQKSVLRSSSLPGKLADCSSTDP 502



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 29/34 (85%), Positives = 33/34 (97%)
 Frame = +3

Query: 327 TRLGNPEVQRVVDQSVQEYLTEYLELHPDVLDLI 428
           TRLGNPEV++VVDQS+QEYLTEYLELHPDVLD +
Sbjct: 425 TRLGNPEVRKVVDQSIQEYLTEYLELHPDVLDSV 458


>ref|XP_003521129.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
           [Glycine max]
          Length = 726

 Score =  148 bits (374), Expect = 4e-34
 Identities = 74/95 (77%), Positives = 81/95 (85%)
 Frame = +3

Query: 3   CVISVKVPNPEFEGQTKTRLGNPEVRRVVDQSVQEYLTEYLELHPDVLDLILSKSLNXXX 182
           CV+SVKVPNPEFEGQTKTRLGNPEVR+VVDQS+QEYLTEYLELHPDVLD +LSK+LN   
Sbjct: 410 CVVSVKVPNPEFEGQTKTRLGNPEVRKVVDQSIQEYLTEYLELHPDVLDSVLSKALNAFK 469

Query: 183 XXXXXXXXXELVRQKSVLKSSSLPGKLADHSATDP 287
                    ELVRQKSVL+SSSLPGKLAD S+TDP
Sbjct: 470 AALAAKRARELVRQKSVLRSSSLPGKLADCSSTDP 504



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 29/34 (85%), Positives = 33/34 (97%)
 Frame = +3

Query: 327 TRLGNPEVQRVVDQSVQEYLTEYLELHPDVLDLI 428
           TRLGNPEV++VVDQS+QEYLTEYLELHPDVLD +
Sbjct: 427 TRLGNPEVRKVVDQSIQEYLTEYLELHPDVLDSV 460