BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017926
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]    90   2e-16
gb|ABF95666.1| retrotransposon protein, putative, Ty1-copia subc...    89   5e-16
emb|CAN74381.1| hypothetical protein VITISV_007944 [Vitis vinifera]    88   6e-16
ref|XP_002446435.1| hypothetical protein SORBIDRAFT_06g016046 [S...    88   8e-16
dbj|BAA78427.1| polyprotein [Arabidopsis thaliana]                     87   1e-15

>emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]
          Length = 1361

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 40/79 (50%), Positives = 55/79 (69%)
 Frame = -3

Query: 240 DMARTLLFSSHVPLIHWVDAVSTAVYLINRLPSPTIQWSSPFSRLYGKSPTYSELRIFGC 61
           ++  TL+F + VPL  W +A STAV+LINRLP P++   +P+  L+GK P YS LR FGC
Sbjct: 589 EIGLTLMFHARVPLSLWDEAFSTAVFLINRLPPPSLAGKTPYELLFGKQPDYSMLRTFGC 648

Query: 60  ACYPHLGAYMTNKLLPRTT 4
            C+P+L  Y  NKL P++T
Sbjct: 649 LCFPYLRDYSPNKLSPKST 667


>gb|ABF95666.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
           [Oryza sativa Japonica Group]
          Length = 976

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 39/79 (49%), Positives = 55/79 (69%)
 Frame = -3

Query: 240 DMARTLLFSSHVPLIHWVDAVSTAVYLINRLPSPTIQWSSPFSRLYGKSPTYSELRIFGC 61
           ++ R+LLF + +P   WV+A+ TA +LINR P+ T++  +PF  LYG  P+Y  LR+FGC
Sbjct: 356 NIVRSLLFQASLPASFWVEALYTATHLINRHPTKTLKHHTPFFALYGTHPSYDHLRVFGC 415

Query: 60  ACYPHLGAYMTNKLLPRTT 4
            CYP+L A   NKL PR+T
Sbjct: 416 KCYPNLSATAANKLSPRST 434


>emb|CAN74381.1| hypothetical protein VITISV_007944 [Vitis vinifera]
          Length = 1884

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 41/78 (52%), Positives = 53/78 (67%)
 Frame = -3

Query: 240 DMARTLLFSSHVPLIHWVDAVSTAVYLINRLPSPTIQWSSPFSRLYGKSPTYSELRIFGC 61
           +M  T+LF++ +PL  WVDA  TAVYLINRLPS  ++  SPF  L+ + P Y  LRIFGC
Sbjct: 575 EMGLTMLFNAKLPLSLWVDAFLTAVYLINRLPSTVLKMESPFFMLFKQYPEYRSLRIFGC 634

Query: 60  ACYPHLGAYMTNKLLPRT 7
            C+P+L  Y  NK  P+T
Sbjct: 635 QCFPYLRDYGKNKFSPKT 652


>ref|XP_002446435.1| hypothetical protein SORBIDRAFT_06g016046 [Sorghum bicolor]
           gi|241937618|gb|EES10763.1| hypothetical protein
           SORBIDRAFT_06g016046 [Sorghum bicolor]
          Length = 856

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 39/79 (49%), Positives = 56/79 (70%)
 Frame = -3

Query: 240 DMARTLLFSSHVPLIHWVDAVSTAVYLINRLPSPTIQWSSPFSRLYGKSPTYSELRIFGC 61
           ++ RTLLF + +P  +W DA++TA  LINRLP+ T+  S+PF  LYG  P+Y +LR+FG 
Sbjct: 14  NVTRTLLFQASMPPTYWADALATATLLINRLPTKTLNMSTPFFALYGTLPSYHDLRVFGS 73

Query: 60  ACYPHLGAYMTNKLLPRTT 4
            CYP+L A   +KL PR++
Sbjct: 74  TCYPNLTATTPHKLAPRSS 92


>dbj|BAA78427.1| polyprotein [Arabidopsis thaliana]
          Length = 1421

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 39/74 (52%), Positives = 52/74 (70%)
 Frame = -3

Query: 240 DMARTLLFSSHVPLIHWVDAVSTAVYLINRLPSPTIQWSSPFSRLYGKSPTYSELRIFGC 61
           +M  TLL  + VP  +W+ A S AVYLINRLP+P +Q  SPF +L+G+ P Y +L++FGC
Sbjct: 632 EMGLTLLSHASVPKTYWLYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGC 691

Query: 60  ACYPHLGAYMTNKL 19
           ACYP L  Y  +KL
Sbjct: 692 ACYPWLRPYNRHKL 705