BLASTX nr result

ID: Coptis21_contig00017924 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017924
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15390.3| unnamed protein product [Vitis vinifera]              160   8e-38
ref|XP_002271556.1| PREDICTED: G patch domain-containing protein...   160   8e-38
ref|XP_002511999.1| RNA binding protein, putative [Ricinus commu...   156   1e-36
ref|XP_002318558.1| predicted protein [Populus trichocarpa] gi|2...   149   3e-34
ref|XP_004155037.1| PREDICTED: LOW QUALITY PROTEIN: G patch doma...   145   3e-33

>emb|CBI15390.3| unnamed protein product [Vitis vinifera]
          Length = 944

 Score =  160 bits (406), Expect = 8e-38
 Identities = 84/153 (54%), Positives = 110/153 (71%)
 Frame = -2

Query: 459  IEKGKQDASNVLFPNQQLAEMSASASLQFTSGGLEEAKVSKVEEQIRSKMYPKRDEYQWR 280
            IEKG +   + L   QQ  EMSA+A ++F  GGLE+AKV++ EE +  KMYPKR+E+QWR
Sbjct: 587  IEKGLRGKESNL-STQQFMEMSATAVMEFAPGGLEQAKVTQAEELVIKKMYPKREEFQWR 645

Query: 279  PSPLLCKRFDIVDPYMGKPPPLPRARSRMDSLVFTSDFVKATKSEDTVPASGNSMFVSQP 100
            PSP+LCKRFDI+DP+MGKPPP PR RS+MDSLVFTSD VK+T  ++TV    + + V+Q 
Sbjct: 646  PSPILCKRFDIIDPFMGKPPPAPRRRSKMDSLVFTSDSVKSTTVDETVT---SKLPVAQL 702

Query: 99   EIQVTADEVLNSETEIEINSTNVERRVDLYKAI 1
            + Q  + +V   E E+ +    VER VDLYKAI
Sbjct: 703  DPQQFSTDVNAREIEVNMEVEKVERPVDLYKAI 735


>ref|XP_002271556.1| PREDICTED: G patch domain-containing protein 1-like [Vitis vinifera]
          Length = 997

 Score =  160 bits (406), Expect = 8e-38
 Identities = 84/153 (54%), Positives = 110/153 (71%)
 Frame = -2

Query: 459  IEKGKQDASNVLFPNQQLAEMSASASLQFTSGGLEEAKVSKVEEQIRSKMYPKRDEYQWR 280
            IEKG +   + L   QQ  EMSA+A ++F  GGLE+AKV++ EE +  KMYPKR+E+QWR
Sbjct: 587  IEKGLRGKESNL-STQQFMEMSATAVMEFAPGGLEQAKVTQAEELVIKKMYPKREEFQWR 645

Query: 279  PSPLLCKRFDIVDPYMGKPPPLPRARSRMDSLVFTSDFVKATKSEDTVPASGNSMFVSQP 100
            PSP+LCKRFDI+DP+MGKPPP PR RS+MDSLVFTSD VK+T  ++TV    + + V+Q 
Sbjct: 646  PSPILCKRFDIIDPFMGKPPPAPRRRSKMDSLVFTSDSVKSTTVDETVT---SKLPVAQL 702

Query: 99   EIQVTADEVLNSETEIEINSTNVERRVDLYKAI 1
            + Q  + +V   E E+ +    VER VDLYKAI
Sbjct: 703  DPQQFSTDVNAREIEVNMEVEKVERPVDLYKAI 735


>ref|XP_002511999.1| RNA binding protein, putative [Ricinus communis]
            gi|223549179|gb|EEF50668.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 1000

 Score =  156 bits (395), Expect = 1e-36
 Identities = 79/153 (51%), Positives = 103/153 (67%)
 Frame = -2

Query: 459  IEKGKQDASNVLFPNQQLAEMSASASLQFTSGGLEEAKVSKVEEQIRSKMYPKRDEYQWR 280
            IEKGK +    L   Q +A  S     QFTSGGLE+ K +  E+ +  K+YPKR+E+QWR
Sbjct: 590  IEKGKGNKETKLSAQQFMA-FSTGGGTQFTSGGLEQVKDAHAEDLLMKKIYPKREEFQWR 648

Query: 279  PSPLLCKRFDIVDPYMGKPPPLPRARSRMDSLVFTSDFVKATKSEDTVPASGNSMFVSQP 100
            P P+LCKRFD++DPYMGKPPP PR RS++DSL+FTSD VK TK E+T  A+ + +   Q 
Sbjct: 649  PLPILCKRFDLIDPYMGKPPPPPRMRSKLDSLIFTSDSVKPTKLEETTNANRDRISNLQS 708

Query: 99   EIQVTADEVLNSETEIEINSTNVERRVDLYKAI 1
              Q  + +  +SE  +E+   NVER VDLYKAI
Sbjct: 709  GTQKISKDAADSEKVVEVQVENVERPVDLYKAI 741


>ref|XP_002318558.1| predicted protein [Populus trichocarpa] gi|222859231|gb|EEE96778.1|
            predicted protein [Populus trichocarpa]
          Length = 965

 Score =  149 bits (375), Expect = 3e-34
 Identities = 79/153 (51%), Positives = 102/153 (66%)
 Frame = -2

Query: 459  IEKGKQDASNVLFPNQQLAEMSASASLQFTSGGLEEAKVSKVEEQIRSKMYPKRDEYQWR 280
            IEKGK +  N L  +QQL    AS  +QFT GGL++ K +  E+    K+YP+R+E+QWR
Sbjct: 594  IEKGKLNKENKL--SQQLMAFPASGGMQFTLGGLQQGKDTPDEDLATKKIYPRREEFQWR 651

Query: 279  PSPLLCKRFDIVDPYMGKPPPLPRARSRMDSLVFTSDFVKATKSEDTVPASGNSMFVSQP 100
            PS +LCKRFD++DP MGKPPP PR RS+MDSL+ TSD +KA K E+   A  N     Q 
Sbjct: 652  PSSVLCKRFDLIDPSMGKPPPPPRMRSKMDSLIVTSD-LKAMKMEEAFSADRNQPLALQF 710

Query: 99   EIQVTADEVLNSETEIEINSTNVERRVDLYKAI 1
              Q  + +V++ ETE E+   NVER VDLYKAI
Sbjct: 711  SPQEVSKDVVDRETEPEVQVENVERPVDLYKAI 743


>ref|XP_004155037.1| PREDICTED: LOW QUALITY PROTEIN: G patch domain-containing protein
           1-like [Cucumis sativus]
          Length = 470

 Score =  145 bits (367), Expect = 3e-33
 Identities = 75/154 (48%), Positives = 106/154 (68%), Gaps = 1/154 (0%)
 Frame = -2

Query: 459 IEKGKQDASNVLFPNQQLAEMSASASLQFTSGGLEEAKVSKVEEQIRSKMYPKRDEYQWR 280
           IEKGK          +   +  A+  +QFTSGG+EE K +K+E  +  KM PKR+EYQWR
Sbjct: 60  IEKGK-GLKETKLSAEHFVDFLATGGMQFTSGGVEEVKDTKLEGLMMEKMIPKREEYQWR 118

Query: 279 PSPLLCKRFDIVDPYMGKPPPLPRARSRMDSLVFTSDFVKATKSEDTVPASGNSMFVSQP 100
           P+P+LCKRFD++DPYMGKPPP PR RS++D+L+FTS+ VK+TK E+++ ++ +S   S  
Sbjct: 119 PAPILCKRFDLIDPYMGKPPPAPRMRSKLDTLIFTSNSVKSTKVEESLTSTPSSFPQSNA 178

Query: 99  EIQ-VTADEVLNSETEIEINSTNVERRVDLYKAI 1
           E + + A E +N + E+E     V+R VDLYKAI
Sbjct: 179 EEKDMDASENVNEKVEVEC----VDRPVDLYKAI 208


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