BLASTX nr result

ID: Coptis21_contig00017919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017919
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138461.1| PREDICTED: protoporphyrinogen oxidase, chlor...   223   1e-56
ref|XP_004167686.1| PREDICTED: protoporphyrinogen oxidase, chlor...   223   2e-56
ref|XP_002509548.1| amine oxidase, putative [Ricinus communis] g...   222   3e-56
ref|XP_002263321.1| PREDICTED: protoporphyrinogen oxidase, mitoc...   218   8e-55
ref|XP_002298607.1| predicted protein [Populus trichocarpa] gi|2...   217   1e-54

>ref|XP_004138461.1| PREDICTED: protoporphyrinogen oxidase,
           chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 497

 Score =  223 bits (569), Expect = 1e-56
 Identities = 117/173 (67%), Positives = 135/173 (78%)
 Frame = +1

Query: 58  KTKLRSVKSVAVVGGGISGLAAAYKLKSNGLDVTLFEADERVGGKLKSVSRDGLIWDEGA 237
           K+   S K VAVVG G+SGLAAAYKLKS+G DVT+ EADERVGGKL+SVS  GLIWDEGA
Sbjct: 2   KSSQSSRKKVAVVGAGVSGLAAAYKLKSHGFDVTVLEADERVGGKLRSVSYKGLIWDEGA 61

Query: 238 NTMLESEMEVTRILDNAGLRGKQQFPISANKRYIVRNGQLEILPTNFFGFIKSNFLSTKS 417
           NTM ESE EV  +LD+ GLR KQQFPIS NKRYIVRNG   ++PTN    IKSNFLS KS
Sbjct: 62  NTMTESEPEVQCLLDDLGLREKQQFPISQNKRYIVRNGVPVLVPTNPIALIKSNFLSAKS 121

Query: 418 KFQLIMEPFLWRSYVKNVVSLEASNEDSKQSVRDFFERHFGKEVVDYLIDPFV 576
           KFQ+I+EPFLW+ Y  + VS + ++E    SV  FF+RHFG+EVVDYLIDP V
Sbjct: 122 KFQIILEPFLWKKYDSSKVSDDGTDE----SVGGFFQRHFGQEVVDYLIDPIV 170


>ref|XP_004167686.1| PREDICTED: protoporphyrinogen oxidase,
           chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 502

 Score =  223 bits (568), Expect = 2e-56
 Identities = 118/177 (66%), Positives = 138/177 (77%)
 Frame = +1

Query: 46  REDSKTKLRSVKSVAVVGGGISGLAAAYKLKSNGLDVTLFEADERVGGKLKSVSRDGLIW 225
           ++D +T   S K VAVVG G+SGLAAAYKLKS+G DVT+ EADERVGGKL+SVS  GLIW
Sbjct: 6   KQDRRT---SRKKVAVVGAGVSGLAAAYKLKSHGFDVTVLEADERVGGKLRSVSYKGLIW 62

Query: 226 DEGANTMLESEMEVTRILDNAGLRGKQQFPISANKRYIVRNGQLEILPTNFFGFIKSNFL 405
           DEGANTM ESE EV  +LD+ GLR KQQFPIS NKRYIVRNG   ++PTN    IKSNFL
Sbjct: 63  DEGANTMTESEPEVQCLLDDLGLREKQQFPISQNKRYIVRNGVPVLVPTNPIALIKSNFL 122

Query: 406 STKSKFQLIMEPFLWRSYVKNVVSLEASNEDSKQSVRDFFERHFGKEVVDYLIDPFV 576
           S KSKFQ+I+EPFLW+ Y  + VS + ++E    SV  FF+RHFG+EVVDYLIDP V
Sbjct: 123 SAKSKFQIILEPFLWKKYDSSKVSDDGTDE----SVGGFFQRHFGQEVVDYLIDPIV 175


>ref|XP_002509548.1| amine oxidase, putative [Ricinus communis]
           gi|223549447|gb|EEF50935.1| amine oxidase, putative
           [Ricinus communis]
          Length = 511

 Score =  222 bits (566), Expect = 3e-56
 Identities = 113/167 (67%), Positives = 133/167 (79%)
 Frame = +1

Query: 76  VKSVAVVGGGISGLAAAYKLKSNGLDVTLFEADERVGGKLKSVSRDGLIWDEGANTMLES 255
           VK VAVVG G+SGLAAAYKLKS+GL VT+FEA+ER GGKL+SV+ DGLIWDEGANTM ES
Sbjct: 14  VKRVAVVGAGVSGLAAAYKLKSHGLKVTVFEAEERAGGKLRSVNHDGLIWDEGANTMTES 73

Query: 256 EMEVTRILDNAGLRGKQQFPISANKRYIVRNGQLEILPTNFFGFIKSNFLSTKSKFQLIM 435
           EMEV  ++ N G+R KQQFPIS NKRYIVRNG+  ++PTN    I SN LS +SKFQ+I+
Sbjct: 74  EMEVKSLIGNLGIREKQQFPISQNKRYIVRNGKPILIPTNPIALITSNILSAQSKFQIIL 133

Query: 436 EPFLWRSYVKNVVSLEASNEDSKQSVRDFFERHFGKEVVDYLIDPFV 576
           EPFLW    K   S E  N  +++SV +FF+RHFGKEVVDYLIDPFV
Sbjct: 134 EPFLW----KKRESSETHNAYTEESVGEFFQRHFGKEVVDYLIDPFV 176


>ref|XP_002263321.1| PREDICTED: protoporphyrinogen oxidase, mitochondrial [Vitis
           vinifera] gi|296090240|emb|CBI40059.3| unnamed protein
           product [Vitis vinifera]
          Length = 508

 Score =  218 bits (554), Expect = 8e-55
 Identities = 112/168 (66%), Positives = 136/168 (80%)
 Frame = +1

Query: 73  SVKSVAVVGGGISGLAAAYKLKSNGLDVTLFEADERVGGKLKSVSRDGLIWDEGANTMLE 252
           S K VAVVG G+SGLAAAYKLK +G+++TL+EA+ER GGKL+SVS+ GL+WDEGANTM E
Sbjct: 14  SGKRVAVVGAGVSGLAAAYKLKLHGVNITLYEAEERAGGKLRSVSQHGLVWDEGANTMTE 73

Query: 253 SEMEVTRILDNAGLRGKQQFPISANKRYIVRNGQLEILPTNFFGFIKSNFLSTKSKFQLI 432
           SE+EV  +LDN  LR KQQFPIS NKRYIVRNG   +LP+N    IKSN LS KSKFQ+I
Sbjct: 74  SEIEVGSLLDNLRLREKQQFPISQNKRYIVRNGMPVLLPSNPIALIKSNILSAKSKFQII 133

Query: 433 MEPFLWRSYVKNVVSLEASNEDSKQSVRDFFERHFGKEVVDYLIDPFV 576
           +EPFLW+   K+ +S + S++  K+SV  FF+RHFGKEVVDYLIDPFV
Sbjct: 134 LEPFLWK---KSDLS-KVSDDHMKESVGGFFQRHFGKEVVDYLIDPFV 177


>ref|XP_002298607.1| predicted protein [Populus trichocarpa] gi|222845865|gb|EEE83412.1|
           predicted protein [Populus trichocarpa]
          Length = 482

 Score =  217 bits (552), Expect = 1e-54
 Identities = 109/166 (65%), Positives = 132/166 (79%)
 Frame = +1

Query: 79  KSVAVVGGGISGLAAAYKLKSNGLDVTLFEADERVGGKLKSVSRDGLIWDEGANTMLESE 258
           K+VAV+G G+SGLAAAYKLKSNG+ VT+FEA+ R GGKL+SVS   L+WDEGANTM ESE
Sbjct: 16  KNVAVIGAGVSGLAAAYKLKSNGVKVTVFEAEGRAGGKLRSVSHHDLVWDEGANTMTESE 75

Query: 259 MEVTRILDNAGLRGKQQFPISANKRYIVRNGQLEILPTNFFGFIKSNFLSTKSKFQLIME 438
           +EV  +LD+ GLR KQQFPI+ NKRYIVRNG   ++PTN    IKSNFLS +SK Q+I+E
Sbjct: 76  VEVKSLLDDLGLREKQQFPIAQNKRYIVRNGMPVLIPTNPVALIKSNFLSAQSKLQIILE 135

Query: 439 PFLWRSYVKNVVSLEASNEDSKQSVRDFFERHFGKEVVDYLIDPFV 576
           PFLW    K   S + S+ D ++SV +FF+RHFGKEVVDYLIDPFV
Sbjct: 136 PFLW----KKNESSKVSDADIQESVGEFFQRHFGKEVVDYLIDPFV 177


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