BLASTX nr result

ID: Coptis21_contig00017879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017879
         (1042 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF98292.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltra...   404   e-110
gb|AFM93780.1| plastid 2-C-methyl-D-erythritol 4-phosphate cytid...   404   e-110
dbj|BAF98291.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltra...   402   e-110
ref|XP_002268908.1| PREDICTED: 2-C-methyl-D-erythritol 4-phospha...   400   e-109
emb|CAN80766.1| hypothetical protein VITISV_013863 [Vitis vinifera]   400   e-109

>dbj|BAF98292.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Hevea
            brasiliensis]
          Length = 311

 Score =  404 bits (1039), Expect = e-110
 Identities = 201/256 (78%), Positives = 230/256 (89%)
 Frame = +2

Query: 254  PTALVISRKSNLRIXXXXXXXHQTCRAVKEGSVSVVLLAGGKGKRMGASMPKQYIPLLGQ 433
            P  + IS K + +I         +  AVKE SVSV+LLAGGKGKRMGASMPKQY+PLLGQ
Sbjct: 58   PRIVTISVKCSAKI-------ENSSAAVKEKSVSVILLAGGKGKRMGASMPKQYLPLLGQ 110

Query: 434  PIALYSFYTFSRMVQVKEIVVVCDPSYKDIFEDARDNIKVELKFALPGKERQDSVFNGFQ 613
            PIALYSFYTFS+M++VKEIVVVCDPSY+DIFEDA++NI V+LKFALPGKERQDSV++G Q
Sbjct: 111  PIALYSFYTFSKMIEVKEIVVVCDPSYQDIFEDAKENINVDLKFALPGKERQDSVYSGLQ 170

Query: 614  AIDDNSELVCIHDSARPLVSTEDIEKVLDDGWLNGAAVLGVPAKATIKEANSESFVVRTL 793
             +D NSELVC+HDSARPLVS+ D++KV++D W+NGAAVLGVPAKATIKEANSESFVVRTL
Sbjct: 171  EVDLNSELVCVHDSARPLVSSADVKKVIEDAWINGAAVLGVPAKATIKEANSESFVVRTL 230

Query: 794  DRKTLWEMQTPQIIKPELLTKGFELVNREGLEVTDDVSIVEHLKHPVYITQGSYTNIKVT 973
            DRKTLWEMQTPQ+IKP+LL KGFELV+R+GLEVTDDVSIVEHLKHPVYIT+GSYTNIKVT
Sbjct: 231  DRKTLWEMQTPQVIKPDLLKKGFELVSRDGLEVTDDVSIVEHLKHPVYITEGSYTNIKVT 290

Query: 974  TPDDLLLAERILNDDS 1021
            TPDDLLLAERILN +S
Sbjct: 291  TPDDLLLAERILNLNS 306


>gb|AFM93780.1| plastid 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
            [Picrorhiza kurrooa]
          Length = 311

 Score =  404 bits (1037), Expect = e-110
 Identities = 199/229 (86%), Positives = 218/229 (95%)
 Frame = +2

Query: 335  VKEGSVSVVLLAGGKGKRMGASMPKQYIPLLGQPIALYSFYTFSRMVQVKEIVVVCDPSY 514
            VKE SVSVVLLAGGKGKRMGASMPKQY+PLLGQPIALYSFYTFS+M +VKEIVVVCDPSY
Sbjct: 83   VKEKSVSVVLLAGGKGKRMGASMPKQYLPLLGQPIALYSFYTFSKMPEVKEIVVVCDPSY 142

Query: 515  KDIFEDARDNIKVELKFALPGKERQDSVFNGFQAIDDNSELVCIHDSARPLVSTEDIEKV 694
            +DIFEDA+DNI+V+LKFALPGKERQDSV++G +AID NSELVC+HDSARPLV TED+ KV
Sbjct: 143  QDIFEDAKDNIQVDLKFALPGKERQDSVYSGLEAIDSNSELVCVHDSARPLVLTEDVAKV 202

Query: 695  LDDGWLNGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQIIKPELLTKGFELVN 874
            L DGWL GAAV+GVPAKATIKEAN+ESFVV+TLDRKTLWEMQTPQ+IKP+LL KGFE VN
Sbjct: 203  LKDGWLIGAAVVGVPAKATIKEANTESFVVKTLDRKTLWEMQTPQVIKPDLLKKGFEHVN 262

Query: 875  REGLEVTDDVSIVEHLKHPVYITQGSYTNIKVTTPDDLLLAERILNDDS 1021
            REGLEVTDDVSIVEHLKHPVYIT+GSYTNI+VTTPDDLLLAERILN DS
Sbjct: 263  REGLEVTDDVSIVEHLKHPVYITEGSYTNIEVTTPDDLLLAERILNPDS 311


>dbj|BAF98291.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Hevea
            brasiliensis]
          Length = 311

 Score =  402 bits (1033), Expect = e-110
 Identities = 195/230 (84%), Positives = 219/230 (95%)
 Frame = +2

Query: 332  AVKEGSVSVVLLAGGKGKRMGASMPKQYIPLLGQPIALYSFYTFSRMVQVKEIVVVCDPS 511
            A KE SVSV+LLAGGKGKRMGASMPKQY+PLLGQPIALYSFYTFS+M++VKEIVVVCDPS
Sbjct: 77   AAKEKSVSVILLAGGKGKRMGASMPKQYLPLLGQPIALYSFYTFSKMIEVKEIVVVCDPS 136

Query: 512  YKDIFEDARDNIKVELKFALPGKERQDSVFNGFQAIDDNSELVCIHDSARPLVSTEDIEK 691
            Y+DIFEDA++NI V+LKFALPGKERQDSV++G   +D NSELVC+HDSARPLVS+ D++K
Sbjct: 137  YQDIFEDAKENINVDLKFALPGKERQDSVYSGLHEVDLNSELVCVHDSARPLVSSADVKK 196

Query: 692  VLDDGWLNGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQIIKPELLTKGFELV 871
            V++D W+NGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQ+IKP+LL KGFELV
Sbjct: 197  VIEDAWINGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELV 256

Query: 872  NREGLEVTDDVSIVEHLKHPVYITQGSYTNIKVTTPDDLLLAERILNDDS 1021
            NR+GLEVTDDVSIVEHLKHPVYIT+GSYTNIKVTTPDDLLLAERILN +S
Sbjct: 257  NRDGLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLLAERILNLNS 306


>ref|XP_002268908.1| PREDICTED: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase,
            chloroplastic [Vitis vinifera]
            gi|297739442|emb|CBI29624.3| unnamed protein product
            [Vitis vinifera]
          Length = 308

 Score =  400 bits (1029), Expect = e-109
 Identities = 202/235 (85%), Positives = 218/235 (92%)
 Frame = +2

Query: 317  HQTCRAVKEGSVSVVLLAGGKGKRMGASMPKQYIPLLGQPIALYSFYTFSRMVQVKEIVV 496
            ++T   VKE SVSV+LLAGGKGKRMGASMPKQY+PLLGQPIALYSFYTFSRM  VKEIVV
Sbjct: 71   NETDLVVKEKSVSVILLAGGKGKRMGASMPKQYLPLLGQPIALYSFYTFSRMSAVKEIVV 130

Query: 497  VCDPSYKDIFEDARDNIKVELKFALPGKERQDSVFNGFQAIDDNSELVCIHDSARPLVST 676
            VCDPSYKDIFEDA++NI +++KF LPGKERQDSV++G QA+D NSELVCIHDSARPLVST
Sbjct: 131  VCDPSYKDIFEDAKENIHIDVKFTLPGKERQDSVYSGLQAVDLNSELVCIHDSARPLVST 190

Query: 677  EDIEKVLDDGWLNGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQIIKPELLTK 856
             DIE+VL DG LNGAAVLGVP KATIKEANSESFVVRTLDRKTLWEMQTPQ+IKPELL K
Sbjct: 191  GDIEQVLKDGQLNGAAVLGVPVKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPELLRK 250

Query: 857  GFELVNREGLEVTDDVSIVEHLKHPVYITQGSYTNIKVTTPDDLLLAERILNDDS 1021
            GFELVNRE LEVTDDVSIVEHLKHPV+IT+GSYTNIKVTTPDDLLLAERILN DS
Sbjct: 251  GFELVNRECLEVTDDVSIVEHLKHPVFITEGSYTNIKVTTPDDLLLAERILNLDS 305


>emb|CAN80766.1| hypothetical protein VITISV_013863 [Vitis vinifera]
          Length = 312

 Score =  400 bits (1029), Expect = e-109
 Identities = 202/235 (85%), Positives = 218/235 (92%)
 Frame = +2

Query: 317  HQTCRAVKEGSVSVVLLAGGKGKRMGASMPKQYIPLLGQPIALYSFYTFSRMVQVKEIVV 496
            ++T   VKE SVSV+LLAGGKGKRMGASMPKQY+PLLGQPIALYSFYTFSRM  VKEIVV
Sbjct: 75   NETDLVVKEKSVSVILLAGGKGKRMGASMPKQYLPLLGQPIALYSFYTFSRMSAVKEIVV 134

Query: 497  VCDPSYKDIFEDARDNIKVELKFALPGKERQDSVFNGFQAIDDNSELVCIHDSARPLVST 676
            VCDPSYKDIFEDA++NI +++KF LPGKERQDSV++G QA+D NSELVCIHDSARPLVST
Sbjct: 135  VCDPSYKDIFEDAKENIHIDVKFTLPGKERQDSVYSGLQAVDLNSELVCIHDSARPLVST 194

Query: 677  EDIEKVLDDGWLNGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQIIKPELLTK 856
             DIE+VL DG LNGAAVLGVP KATIKEANSESFVVRTLDRKTLWEMQTPQ+IKPELL K
Sbjct: 195  GDIEQVLKDGQLNGAAVLGVPVKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPELLRK 254

Query: 857  GFELVNREGLEVTDDVSIVEHLKHPVYITQGSYTNIKVTTPDDLLLAERILNDDS 1021
            GFELVNRE LEVTDDVSIVEHLKHPV+IT+GSYTNIKVTTPDDLLLAERILN DS
Sbjct: 255  GFELVNRECLEVTDDVSIVEHLKHPVFITEGSYTNIKVTTPDDLLLAERILNLDS 309


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