BLASTX nr result

ID: Coptis21_contig00017862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017862
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314452.1| predicted protein [Populus trichocarpa] gi|2...   256   3e-66
ref|XP_002516904.1| Mitochondrial deoxynucleotide carrier, putat...   255   3e-66
ref|XP_002330367.1| predicted protein [Populus trichocarpa] gi|2...   248   6e-64
ref|XP_002272682.1| PREDICTED: mitochondrial thiamine pyrophosph...   245   5e-63
gb|AFK35462.1| unknown [Lotus japonicus]                              243   1e-62

>ref|XP_002314452.1| predicted protein [Populus trichocarpa] gi|222863492|gb|EEF00623.1|
           predicted protein [Populus trichocarpa]
          Length = 339

 Score =  256 bits (653), Expect = 3e-66
 Identities = 123/161 (76%), Positives = 130/161 (80%)
 Frame = -1

Query: 593 VKARGIPGLYAGLTPTLVEIIPYAGLQFGTYDTFKRWTMGWNKFRHXXXXXXXXXXXXXX 414
           V+ RG  GLYAGL+PTLVEI+PYAGLQFGTYDTFKRWTM WN  +               
Sbjct: 179 VRTRGFRGLYAGLSPTLVEIVPYAGLQFGTYDTFKRWTMAWNHHKSSSTSSISTDDNLSS 238

Query: 413 XXXXLCGLAAGTCAKAVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRGMHDALRRILQ 234
               +CGLAAGTCAK VCHPLDVVKKRFQIEGLQRHPKYG RVEHRAYR M DALRRILQ
Sbjct: 239 FQLFICGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPKYGGRVEHRAYRNMFDALRRILQ 298

Query: 233 AEGWAGLYKGIVPSIIKAAPAGAVTFVAYEFTSDWLESIVT 111
            EGWAGLYKGIVPS +KAAPAGAVTFVAYEFTSDWLESI+T
Sbjct: 299 TEGWAGLYKGIVPSTVKAAPAGAVTFVAYEFTSDWLESILT 339



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 35/154 (22%), Positives = 60/154 (38%)
 Frame = -1

Query: 590 KARGIPGLYAGLTPTLVEIIPYAGLQFGTYDTFKRWTMGWNKFRHXXXXXXXXXXXXXXX 411
           +  G+PG + G  P L+ ++PY  +QF      K +  G +K                  
Sbjct: 81  REEGLPGFWRGNVPALLMVMPYTAIQFAVLHKLKTFAAGSSK--------TEDHIQLSPY 132

Query: 410 XXXLCGLAAGTCAKAVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRGMHDALRRILQA 231
                G  AG  A    +P D+++     +G           E + Y  M  A   I++ 
Sbjct: 133 LSYASGALAGCAATVGSYPFDLLRTILASQG-----------EPKVYPTMRSAFVDIVRT 181

Query: 230 EGWAGLYKGIVPSIIKAAPAGAVTFVAYEFTSDW 129
            G+ GLY G+ P++++  P   + F  Y+    W
Sbjct: 182 RGFRGLYAGLSPTLVEIVPYAGLQFGTYDTFKRW 215


>ref|XP_002516904.1| Mitochondrial deoxynucleotide carrier, putative [Ricinus communis]
           gi|223543992|gb|EEF45518.1| Mitochondrial
           deoxynucleotide carrier, putative [Ricinus communis]
          Length = 331

 Score =  255 bits (652), Expect = 3e-66
 Identities = 125/161 (77%), Positives = 131/161 (81%)
 Frame = -1

Query: 593 VKARGIPGLYAGLTPTLVEIIPYAGLQFGTYDTFKRWTMGWNKFRHXXXXXXXXXXXXXX 414
           ++ RG  GLYAGL+PTLVEIIPYAGLQFGTYDTFKRW M WN  R               
Sbjct: 171 IRTRGFKGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWMMAWNCRRSSSTSSTYIDNSPSS 230

Query: 413 XXXXLCGLAAGTCAKAVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRGMHDALRRILQ 234
               +CGLAAGTCAK VCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYR M DALRRILQ
Sbjct: 231 FQLFVCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRNMADALRRILQ 290

Query: 233 AEGWAGLYKGIVPSIIKAAPAGAVTFVAYEFTSDWLESIVT 111
           AEGWAGLYKGI+PS IKAAPAGAVTFVAYEFTSDWLESI+T
Sbjct: 291 AEGWAGLYKGILPSTIKAAPAGAVTFVAYEFTSDWLESILT 331


>ref|XP_002330367.1| predicted protein [Populus trichocarpa] gi|222871571|gb|EEF08702.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score =  248 bits (633), Expect = 6e-64
 Identities = 119/158 (75%), Positives = 127/158 (80%)
 Frame = -1

Query: 590 KARGIPGLYAGLTPTLVEIIPYAGLQFGTYDTFKRWTMGWNKFRHXXXXXXXXXXXXXXX 411
           + RG  GLYAGL+PTLVEI+PYAGLQFGTYDTFKRWTMGWN  R                
Sbjct: 171 RTRGFRGLYAGLSPTLVEIVPYAGLQFGTYDTFKRWTMGWNHDRSSTTSFISTDDSLSSF 230

Query: 410 XXXLCGLAAGTCAKAVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRGMHDALRRILQA 231
              +CGLAAGTCAK VCHPLDVVKKRFQIEGLQRHP+YGARVEH AY+ M DAL RILQ 
Sbjct: 231 QLFVCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPRYGARVEHHAYKNMFDALSRILQM 290

Query: 230 EGWAGLYKGIVPSIIKAAPAGAVTFVAYEFTSDWLESI 117
           EGWAGLYKGIVPS +KAAPAGAVTF+AYEFTSDWLESI
Sbjct: 291 EGWAGLYKGIVPSTVKAAPAGAVTFLAYEFTSDWLESI 328



 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 35/154 (22%), Positives = 60/154 (38%)
 Frame = -1

Query: 590 KARGIPGLYAGLTPTLVEIIPYAGLQFGTYDTFKRWTMGWNKFRHXXXXXXXXXXXXXXX 411
           +  G+PG + G  P L+ ++PY  +QF      K +  G +K                  
Sbjct: 72  REEGLPGFWRGNVPALLMVMPYTAIQFAVLHKLKTFAAGSSK--------TEDHIHLSPY 123

Query: 410 XXXLCGLAAGTCAKAVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRGMHDALRRILQA 231
              + G  AG  A    +P D+++     +G           E + Y  M  A   I + 
Sbjct: 124 LSYISGALAGCTATVGSYPFDLLRTILASQG-----------EPKVYPTMRSAFVDITRT 172

Query: 230 EGWAGLYKGIVPSIIKAAPAGAVTFVAYEFTSDW 129
            G+ GLY G+ P++++  P   + F  Y+    W
Sbjct: 173 RGFRGLYAGLSPTLVEIVPYAGLQFGTYDTFKRW 206


>ref|XP_002272682.1| PREDICTED: mitochondrial thiamine pyrophosphate carrier [Vitis
           vinifera] gi|297736865|emb|CBI26066.3| unnamed protein
           product [Vitis vinifera]
          Length = 330

 Score =  245 bits (625), Expect = 5e-63
 Identities = 120/161 (74%), Positives = 129/161 (80%)
 Frame = -1

Query: 593 VKARGIPGLYAGLTPTLVEIIPYAGLQFGTYDTFKRWTMGWNKFRHXXXXXXXXXXXXXX 414
           ++ RG  GLYAGL+PTLVEIIPYAGLQFGTYD FKRWTM WN++R               
Sbjct: 171 IRTRGFQGLYAGLSPTLVEIIPYAGLQFGTYDMFKRWTMAWNQYRSSNANLTGTDSISSF 230

Query: 413 XXXXLCGLAAGTCAKAVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRGMHDALRRILQ 234
                CG AAGTCAKAVCHPLDVVKKRFQIEGL R PKYGARVEHRAY  M+DALR+IL 
Sbjct: 231 QLFL-CGFAAGTCAKAVCHPLDVVKKRFQIEGLPRDPKYGARVEHRAYTNMYDALRQILL 289

Query: 233 AEGWAGLYKGIVPSIIKAAPAGAVTFVAYEFTSDWLESIVT 111
            EGWAGLYKGIVPSIIK+APAGAVTFVAYEFTSDWLES+VT
Sbjct: 290 VEGWAGLYKGIVPSIIKSAPAGAVTFVAYEFTSDWLESMVT 330



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 35/154 (22%), Positives = 61/154 (39%)
 Frame = -1

Query: 590 KARGIPGLYAGLTPTLVEIIPYAGLQFGTYDTFKRWTMGWNKFRHXXXXXXXXXXXXXXX 411
           +  G+PG + G  P L+ ++PY  +QF      K +  G +K                  
Sbjct: 73  REEGLPGFWRGNVPALLMVMPYTAIQFTVLHKLKTFAAGSSK--------SEDHIHLSPY 124

Query: 410 XXXLCGLAAGTCAKAVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRGMHDALRRILQA 231
              + G  AG  A    +P D+++     +G           E + Y  M  A   I++ 
Sbjct: 125 LSFVSGALAGCAATVGSYPFDLLRTLLASQG-----------EPKVYPKMRSAFLDIIRT 173

Query: 230 EGWAGLYKGIVPSIIKAAPAGAVTFVAYEFTSDW 129
            G+ GLY G+ P++++  P   + F  Y+    W
Sbjct: 174 RGFQGLYAGLSPTLVEIIPYAGLQFGTYDMFKRW 207


>gb|AFK35462.1| unknown [Lotus japonicus]
          Length = 166

 Score =  243 bits (621), Expect = 1e-62
 Identities = 117/160 (73%), Positives = 127/160 (79%)
 Frame = -1

Query: 590 KARGIPGLYAGLTPTLVEIIPYAGLQFGTYDTFKRWTMGWNKFRHXXXXXXXXXXXXXXX 411
           + RG PGLYAGLTPTL+EIIPYAGLQFGTYDTFKRW M WN   H               
Sbjct: 10  RTRGFPGLYAGLTPTLIEIIPYAGLQFGTYDTFKRWAMVWN---HRHYSNATADDSLSSF 66

Query: 410 XXXLCGLAAGTCAKAVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRGMHDALRRILQA 231
              LCGLAAGTCAK VCHPLDVVKKRFQIEGLQRHP+YGARVEHRAY+ M DA++RI+Q 
Sbjct: 67  QLFLCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPRYGARVEHRAYKNMFDAMKRIIQM 126

Query: 230 EGWAGLYKGIVPSIIKAAPAGAVTFVAYEFTSDWLESIVT 111
           EGWAGLYKG+ PS +KAAPAGAVTFVAYE TSDWLES+ T
Sbjct: 127 EGWAGLYKGLFPSTVKAAPAGAVTFVAYELTSDWLESVWT 166


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