BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017858
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_565951.1| Nup93/Nic96 nucleoporin interacting component-c...   100   2e-19
ref|NP_191294.5| nuclear pore complex component Nup93/Nic96 doma...    99   5e-19
ref|XP_002329719.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19
ref|XP_002284404.1| PREDICTED: uncharacterized protein At2g41620...    97   1e-18
ref|XP_004136664.1| PREDICTED: uncharacterized protein At2g41620...    96   2e-18

>ref|NP_565951.1| Nup93/Nic96 nucleoporin interacting component-containing protein
           [Arabidopsis thaliana]
           gi|21542465|sp|O22224.2|Y2162_ARATH RecName:
           Full=Uncharacterized protein At2g41620
           gi|14334432|gb|AAK59414.1| unknown protein [Arabidopsis
           thaliana] gi|20196948|gb|AAB84345.2| expressed protein
           [Arabidopsis thaliana] gi|21281026|gb|AAM44953.1|
           unknown protein [Arabidopsis thaliana]
           gi|330254914|gb|AEC10008.1| Nup93/Nic96 nucleoporin
           interacting component-containing protein [Arabidopsis
           thaliana]
          Length = 861

 Score =  100 bits (248), Expect = 2e-19
 Identities = 48/61 (78%), Positives = 56/61 (91%)
 Frame = -1

Query: 185 MANEAEMSSWTDLLHSTNKLLEKASPYPQFPPLQRNLDQLESLSKKLKAKTLRSETPSKS 6
           MAN+ EMS WTDLLHS++KLLE+A+P  QFPPLQRNLDQLE+LSKKLKAKTLR+E PS+S
Sbjct: 1   MANDQEMSGWTDLLHSSSKLLEQAAPSSQFPPLQRNLDQLEALSKKLKAKTLRNEAPSQS 60

Query: 5   I 3
           I
Sbjct: 61  I 61


>ref|NP_191294.5| nuclear pore complex component Nup93/Nic96 domain-containing
           protein [Arabidopsis thaliana]
           gi|332646124|gb|AEE79645.1| nuclear pore complex
           component Nup93/Nic96 domain-containing protein
           [Arabidopsis thaliana]
          Length = 860

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 47/61 (77%), Positives = 55/61 (90%)
 Frame = -1

Query: 185 MANEAEMSSWTDLLHSTNKLLEKASPYPQFPPLQRNLDQLESLSKKLKAKTLRSETPSKS 6
           MAN+ EMS WTDLLHS+ KLLE+A+P  QFPPLQRNLDQLE+LS+KLKAKTLR+E PS+S
Sbjct: 1   MANDQEMSGWTDLLHSSTKLLEQAAPSSQFPPLQRNLDQLEALSRKLKAKTLRNEAPSQS 60

Query: 5   I 3
           I
Sbjct: 61  I 61


>ref|XP_002329719.1| predicted protein [Populus trichocarpa] gi|222870627|gb|EEF07758.1|
           predicted protein [Populus trichocarpa]
          Length = 863

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 46/61 (75%), Positives = 55/61 (90%)
 Frame = -1

Query: 185 MANEAEMSSWTDLLHSTNKLLEKASPYPQFPPLQRNLDQLESLSKKLKAKTLRSETPSKS 6
           MA+E +MS+WTDLLHS+ KLLE+A+P PQFPPLQRNLDQLE+LSKKLKAK +R E PS+S
Sbjct: 1   MASEQDMSNWTDLLHSSTKLLEQAAPSPQFPPLQRNLDQLEALSKKLKAKAIRPEAPSQS 60

Query: 5   I 3
           I
Sbjct: 61  I 61


>ref|XP_002284404.1| PREDICTED: uncharacterized protein At2g41620 [Vitis vinifera]
           gi|297739625|emb|CBI29807.3| unnamed protein product
           [Vitis vinifera]
          Length = 863

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 45/61 (73%), Positives = 56/61 (91%)
 Frame = -1

Query: 185 MANEAEMSSWTDLLHSTNKLLEKASPYPQFPPLQRNLDQLESLSKKLKAKTLRSETPSKS 6
           MA +++MSSWTDLLHS+ KLLE+A+P  QFPPLQRNLDQLE+LSKKLK+KTLR+E PS+S
Sbjct: 1   MATDSDMSSWTDLLHSSTKLLEQAAPSAQFPPLQRNLDQLEALSKKLKSKTLRAEAPSQS 60

Query: 5   I 3
           +
Sbjct: 61  V 61


>ref|XP_004136664.1| PREDICTED: uncharacterized protein At2g41620-like [Cucumis sativus]
           gi|449494745|ref|XP_004159635.1| PREDICTED:
           uncharacterized protein At2g41620-like [Cucumis sativus]
          Length = 863

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 46/61 (75%), Positives = 54/61 (88%)
 Frame = -1

Query: 185 MANEAEMSSWTDLLHSTNKLLEKASPYPQFPPLQRNLDQLESLSKKLKAKTLRSETPSKS 6
           MAN+ +MS WTDLLHS+ KLLE+A+P  QFPPLQRNLDQLE LSKKLKAKTLR+E P++S
Sbjct: 1   MANDQDMSGWTDLLHSSTKLLEQAAPSAQFPPLQRNLDQLEVLSKKLKAKTLRTEAPTQS 60

Query: 5   I 3
           I
Sbjct: 61  I 61