BLASTX nr result

ID: Coptis21_contig00017825 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017825
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago trunc...   117   1e-24
ref|XP_002445200.1| hypothetical protein SORBIDRAFT_07g005790 [S...   115   5e-24
ref|NP_001067616.1| Os11g0247800 [Oryza sativa Japonica Group] g...   110   9e-23
gb|EEE51924.1| hypothetical protein OsJ_33534 [Oryza sativa Japo...   110   9e-23

>ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|222858184|gb|EEE95731.1|
           predicted protein [Populus trichocarpa]
          Length = 788

 Score =  119 bits (298), Expect = 3e-25
 Identities = 60/100 (60%), Positives = 76/100 (76%)
 Frame = -3

Query: 302 HNEIIHSVVLANAPSNNKLISPKIQKHLVGACATETTNMILSDLGGSLFSILIDESRDIS 123
           +NE I  V  + AP +NKL SP IQK +  A A E TN+I+ DLG SLFSILIDESRDIS
Sbjct: 234 NNEAIKRVTFSEAPRHNKLTSPDIQKDITQAAAEEITNVIIKDLGDSLFSILIDESRDIS 293

Query: 122 VKEQMAAVIRFVDKSGCVVERFLGMVHVAETSAISLKLAM 3
           +KEQMA V+R+VD +G ++ERFLG+ HV +T+A SLK A+
Sbjct: 294 IKEQMAVVLRYVDNNGHIIERFLGIQHVRDTTASSLKAAI 333


>ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago truncatula]
           gi|355516931|gb|AES98554.1| Zinc finger MYM-type protein
           [Medicago truncatula]
          Length = 892

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/96 (58%), Positives = 73/96 (76%)
 Frame = -3

Query: 290 IHSVVLANAPSNNKLISPKIQKHLVGACATETTNMILSDLGGSLFSILIDESRDISVKEQ 111
           +  VVL NAP N+K+  P IQK  V A + ETT  I+ DLG  LF+IL+DESRD+S KEQ
Sbjct: 341 VKRVVLENAPENDKMTCPSIQKEFVSAISLETTKAIIEDLGDELFAILVDESRDVSDKEQ 400

Query: 110 MAAVIRFVDKSGCVVERFLGMVHVAETSAISLKLAM 3
           M  V+R+V+K GC+VERFLG+VHV  T+A+SLK+A+
Sbjct: 401 MVVVLRYVNKYGCIVERFLGIVHVTTTTAMSLKIAI 436


>ref|XP_002445200.1| hypothetical protein SORBIDRAFT_07g005790 [Sorghum bicolor]
           gi|241941550|gb|EES14695.1| hypothetical protein
           SORBIDRAFT_07g005790 [Sorghum bicolor]
          Length = 776

 Score =  115 bits (287), Expect = 5e-24
 Identities = 56/98 (57%), Positives = 73/98 (74%)
 Frame = -3

Query: 296 EIIHSVVLANAPSNNKLISPKIQKHLVGACATETTNMILSDLGGSLFSILIDESRDISVK 117
           E ++ V L NAP NNKL SP+IQK L+  CA ETT +I+ DLG   F+IL DES D+  K
Sbjct: 225 EDVNRVGLKNAPKNNKLTSPRIQKELINCCAKETTKLIIDDLGDDYFAILADESSDVYQK 284

Query: 116 EQMAAVIRFVDKSGCVVERFLGMVHVAETSAISLKLAM 3
           EQ+A  +R+VDK G VVERFLG+VHV +T++ +LKLA+
Sbjct: 285 EQLALCLRYVDKKGQVVERFLGVVHVGDTTSATLKLAI 322


>ref|NP_001067616.1| Os11g0247800 [Oryza sativa Japonica Group]
           gi|62734649|gb|AAX96758.1| hAT family dimerisation
           domain, putative [Oryza sativa Japonica Group]
           gi|77549562|gb|ABA92359.1| hAT family dimerisation
           domain containing protein [Oryza sativa Japonica Group]
           gi|113644838|dbj|BAF27979.1| Os11g0247800 [Oryza sativa
           Japonica Group]
          Length = 1050

 Score =  110 bits (276), Expect = 9e-23
 Identities = 50/92 (54%), Positives = 72/92 (78%)
 Frame = -3

Query: 278 VLANAPSNNKLISPKIQKHLVGACATETTNMILSDLGGSLFSILIDESRDISVKEQMAAV 99
           +L N+P N+ L SPKIQKHL  ACA +TT  IL D+G   F+IL+DESRD S+KEQMA +
Sbjct: 478 LLGNSPGNHLLTSPKIQKHLCKACANKTTKAILKDIGERNFAILVDESRDASIKEQMAVI 537

Query: 98  IRFVDKSGCVVERFLGMVHVAETSAISLKLAM 3
           +R+++  G V+ERFLG+ HV +T++++LK+A+
Sbjct: 538 LRYINSKGQVIERFLGVEHVPDTTSVALKIAL 569


>gb|EEE51924.1| hypothetical protein OsJ_33534 [Oryza sativa Japonica Group]
          Length = 1002

 Score =  110 bits (276), Expect = 9e-23
 Identities = 50/92 (54%), Positives = 72/92 (78%)
 Frame = -3

Query: 278 VLANAPSNNKLISPKIQKHLVGACATETTNMILSDLGGSLFSILIDESRDISVKEQMAAV 99
           +L N+P N+ L SPKIQKHL  ACA +TT  IL D+G   F+IL+DESRD S+KEQMA +
Sbjct: 430 LLGNSPGNHLLTSPKIQKHLCKACANKTTKAILKDIGERNFAILVDESRDASIKEQMAVI 489

Query: 98  IRFVDKSGCVVERFLGMVHVAETSAISLKLAM 3
           +R+++  G V+ERFLG+ HV +T++++LK+A+
Sbjct: 490 LRYINSKGQVIERFLGVEHVPDTTSVALKIAL 521


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