BLASTX nr result

ID: Coptis21_contig00017822 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017822
         (715 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319259.1| predicted protein [Populus trichocarpa] gi|2...   223   3e-56
emb|CBI20464.3| unnamed protein product [Vitis vinifera]              221   1e-55
ref|XP_002280346.1| PREDICTED: WD repeat-containing protein 25-l...   221   1e-55
emb|CAN83694.1| hypothetical protein VITISV_013363 [Vitis vinifera]   221   1e-55
ref|XP_003556021.1| PREDICTED: WD repeat-containing protein 25-l...   202   6e-50

>ref|XP_002319259.1| predicted protein [Populus trichocarpa] gi|222857635|gb|EEE95182.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score =  223 bits (568), Expect = 3e-56
 Identities = 101/123 (82%), Positives = 113/123 (91%)
 Frame = -2

Query: 714 VYVEAYTCPSIKHHPFERSFVAQSNGNYIAIFSSNTPFKLDKYKRYENHGVSGFPVKCDF 535
           VYVEAYTCPS++ HPFE  FVAQSN NYIAIFSS+ PF+LDKYKRYE+HGVSGFPVKC+F
Sbjct: 286 VYVEAYTCPSVRCHPFEPCFVAQSNANYIAIFSSSPPFRLDKYKRYESHGVSGFPVKCNF 345

Query: 534 SLDGEKLASGSSDGCLYLYDYRSSELLRKIKAYEQACIDVAFHPKLPNVIASCSWSGDVS 355
           SLDGEKL SGSSDGC+Y+Y+YRSSEL+RKIK YEQACIDV FHP LPNVI SCSW+GDVS
Sbjct: 346 SLDGEKLVSGSSDGCIYIYNYRSSELIRKIKVYEQACIDVVFHPVLPNVIGSCSWNGDVS 405

Query: 354 VFE 346
           +FE
Sbjct: 406 IFE 408


>emb|CBI20464.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score =  221 bits (563), Expect = 1e-55
 Identities = 103/123 (83%), Positives = 112/123 (91%)
 Frame = -2

Query: 714 VYVEAYTCPSIKHHPFERSFVAQSNGNYIAIFSSNTPFKLDKYKRYENHGVSGFPVKCDF 535
           VYVEAYTCP I+ HP +  F+AQSNGNYIAIFSS  PFKLDKYKRYENHGVSGFP+KC+F
Sbjct: 384 VYVEAYTCPCIRCHPSDPFFIAQSNGNYIAIFSSCPPFKLDKYKRYENHGVSGFPIKCNF 443

Query: 534 SLDGEKLASGSSDGCLYLYDYRSSELLRKIKAYEQACIDVAFHPKLPNVIASCSWSGDVS 355
           SLDGEKLASGSSDGC+YLYDYRSSEL++KIKAYEQACIDVAFHP LPNVIA+C W G VS
Sbjct: 444 SLDGEKLASGSSDGCIYLYDYRSSELVQKIKAYEQACIDVAFHPLLPNVIAACGWDGAVS 503

Query: 354 VFE 346
           VFE
Sbjct: 504 VFE 506


>ref|XP_002280346.1| PREDICTED: WD repeat-containing protein 25-like [Vitis vinifera]
          Length = 418

 Score =  221 bits (563), Expect = 1e-55
 Identities = 103/123 (83%), Positives = 112/123 (91%)
 Frame = -2

Query: 714 VYVEAYTCPSIKHHPFERSFVAQSNGNYIAIFSSNTPFKLDKYKRYENHGVSGFPVKCDF 535
           VYVEAYTCP I+ HP +  F+AQSNGNYIAIFSS  PFKLDKYKRYENHGVSGFP+KC+F
Sbjct: 296 VYVEAYTCPCIRCHPSDPFFIAQSNGNYIAIFSSCPPFKLDKYKRYENHGVSGFPIKCNF 355

Query: 534 SLDGEKLASGSSDGCLYLYDYRSSELLRKIKAYEQACIDVAFHPKLPNVIASCSWSGDVS 355
           SLDGEKLASGSSDGC+YLYDYRSSEL++KIKAYEQACIDVAFHP LPNVIA+C W G VS
Sbjct: 356 SLDGEKLASGSSDGCIYLYDYRSSELVQKIKAYEQACIDVAFHPLLPNVIAACGWDGAVS 415

Query: 354 VFE 346
           VFE
Sbjct: 416 VFE 418


>emb|CAN83694.1| hypothetical protein VITISV_013363 [Vitis vinifera]
          Length = 297

 Score =  221 bits (563), Expect = 1e-55
 Identities = 103/123 (83%), Positives = 112/123 (91%)
 Frame = -2

Query: 714 VYVEAYTCPSIKHHPFERSFVAQSNGNYIAIFSSNTPFKLDKYKRYENHGVSGFPVKCDF 535
           VYVEAYTCP I+ HP +  F+AQSNGNYIAIFSS  PFKLDKYKRYENHGVSGFP+KC+F
Sbjct: 175 VYVEAYTCPCIRCHPSDPFFIAQSNGNYIAIFSSCPPFKLDKYKRYENHGVSGFPIKCNF 234

Query: 534 SLDGEKLASGSSDGCLYLYDYRSSELLRKIKAYEQACIDVAFHPKLPNVIASCSWSGDVS 355
           SLDGEKLASGSSDGC+YLYDYRSSEL++KIKAYEQACIDVAFHP LPNVIA+C W G VS
Sbjct: 235 SLDGEKLASGSSDGCIYLYDYRSSELVQKIKAYEQACIDVAFHPLLPNVIAACGWDGAVS 294

Query: 354 VFE 346
           VFE
Sbjct: 295 VFE 297


>ref|XP_003556021.1| PREDICTED: WD repeat-containing protein 25-like [Glycine max]
          Length = 359

 Score =  202 bits (514), Expect = 6e-50
 Identities = 89/123 (72%), Positives = 111/123 (90%)
 Frame = -2

Query: 714 VYVEAYTCPSIKHHPFERSFVAQSNGNYIAIFSSNTPFKLDKYKRYENHGVSGFPVKCDF 535
           VYVEAYTCP ++ HPF+ +FVAQSNGNY+AIF++N P++L+K KRYE H VSGFPVKC+F
Sbjct: 237 VYVEAYTCPCVRRHPFDSTFVAQSNGNYVAIFTTNPPYRLNKCKRYEGHVVSGFPVKCNF 296

Query: 534 SLDGEKLASGSSDGCLYLYDYRSSELLRKIKAYEQACIDVAFHPKLPNVIASCSWSGDVS 355
           SLDG+KLASGSSDG +YLYDY+SS++++KIKA++QACIDVAFHP +PNVIASCSW G + 
Sbjct: 297 SLDGKKLASGSSDGSIYLYDYQSSKVVKKIKAHDQACIDVAFHPVIPNVIASCSWDGSIL 356

Query: 354 VFE 346
           VFE
Sbjct: 357 VFE 359


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