BLASTX nr result

ID: Coptis21_contig00017815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017815
         (1408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277233.2| PREDICTED: uncharacterized protein LOC100249...   365   2e-98
emb|CAN66216.1| hypothetical protein VITISV_041165 [Vitis vinifera]   350   4e-94
emb|CBI30260.3| unnamed protein product [Vitis vinifera]              343   6e-92
ref|XP_002534110.1| conserved hypothetical protein [Ricinus comm...   331   3e-88
ref|XP_003625769.1| GRL3 [Medicago truncatula] gi|355500784|gb|A...   315   2e-83

>ref|XP_002277233.2| PREDICTED: uncharacterized protein LOC100249368 [Vitis vinifera]
          Length = 394

 Score =  365 bits (937), Expect = 2e-98
 Identities = 215/390 (55%), Positives = 251/390 (64%), Gaps = 19/390 (4%)
 Frame = +1

Query: 97   MKQWRNQLHESEEQQPSAKIPRLLLLEPTHQPSPVASALPLFVPEPNSRIITSLSAFSDA 276
            +KQWRNQ HESEE  PS K+PRLLL        P  SALPLFVPEPNS+I ++LSAF D+
Sbjct: 5    LKQWRNQ-HESEEA-PSGKMPRLLL-----DQQPSGSALPLFVPEPNSKI-SNLSAFPDS 56

Query: 277  TTS--RFSGMG-CLFSXXXXXXXXXXXXIFKYMIAGAPVPAELLQPIKKSLLNTPAAAAC 447
            TT+  RFS  G   FS            IF++M+AGA VP ELLQ IKKSLLN P     
Sbjct: 57   TTTATRFSKTGGSYFSLAQWQELELQALIFRHMLAGAAVPPELLQLIKKSLLNHPPYYL- 115

Query: 448  XXXXXXXXXXXXXTMLQSGYWGRNSVDPEPGRCRRTDGKKWRCSREIVPGHKYCERHVHR 627
                          +LQSGYWGR ++DPEPGRCRRTDGKKWRCSR++V G KYCERH+HR
Sbjct: 116  -QHPLQHYQHYQPALLQSGYWGRAAMDPEPGRCRRTDGKKWRCSRDVVTGQKYCERHMHR 174

Query: 628  GRNRSRKLVETPTPAATKGD-----------LKTPITVAALPITALATGNQFAPSGPSTS 774
            GRNRSRK VE PTPAA  G              T   +AA P+T +A G  FA SGP  S
Sbjct: 175  GRNRSRKPVEIPTPAAAGGGGGAAVASVGALKSTTAAIAAQPLTTVAGGTHFALSGPPPS 234

Query: 775  ANLTQLNQSRASENKMGNGGLLEIQNGRLSDEGRSDGQLLRQFFDDWPRSNQDSD----G 942
             +L  LN+S   E K  N GL E +   +S +GRSDG++LR FFDDWPRS Q+ D    G
Sbjct: 235  IDLLHLNRS-PPEPKTENKGLFEHRTENVSGDGRSDGRVLRHFFDDWPRSIQEPDNAANG 293

Query: 943  VGRNGGPSTTCLSISTPG-GSSDFSLKLSTGNGDEPEYQDGNGREERPQLDWGTGWNAHQ 1119
               +   S+T LS+S  G  SSD SLKLSTGNGDE   QD N   ERPQL+W  GW  HQ
Sbjct: 294  SNNSQATSSTYLSMSILGHHSSDVSLKLSTGNGDEQSPQDVNAERERPQLNWAAGWGTHQ 353

Query: 1120 VSSMGGPLAEALRSSTSNASPTSVLYELRR 1209
             + MGGPLAEALRS+TSN+SPTSVL++L R
Sbjct: 354  SAQMGGPLAEALRSATSNSSPTSVLHQLPR 383


>emb|CAN66216.1| hypothetical protein VITISV_041165 [Vitis vinifera]
          Length = 437

 Score =  350 bits (899), Expect = 4e-94
 Identities = 219/438 (50%), Positives = 254/438 (57%), Gaps = 60/438 (13%)
 Frame = +1

Query: 76   LSMDCDLMKQWRNQLHESEEQQPSAKIPRLLLLEPTHQPSPVASALPLFVPEPNSRIITS 255
            +SMD  L KQWRNQ HESEE  PS K+PRLLL        P  SALPLFVPEPNS+I ++
Sbjct: 1    MSMDFHL-KQWRNQ-HESEEA-PSGKMPRLLL-----DQQPSGSALPLFVPEPNSKI-SN 51

Query: 256  LSAFSDATTS--RFSGM------------------------------------------G 303
            LSAF D+TT+  RFS                                            G
Sbjct: 52   LSAFPDSTTTATRFSKQLRKLGSRYGKVSGFLVSRFASNLPFFFSLFVWWCAFGLLETGG 111

Query: 304  CLFSXXXXXXXXXXXXIFKYMIAGAPVPAELLQPIKKSLLNTPAAAACXXXXXXXXXXXX 483
              FS            IF++M+AGA VP ELLQ IKKSLLN P                 
Sbjct: 112  SYFSLAQWQELELQALIFRHMLAGAAVPPELLQLIKKSLLNHPPYYL--QHPLQHYQHYQ 169

Query: 484  XTMLQSGYWGRNSVDPEPGRCRRTDGKKWRCSREIVPGHKYCERHVHRGRNRSRKLVETP 663
              +LQSGYWGR ++DPEPGRCRRTDGKKWRCSR++V G KYCERH+HRGRNRSRK VE P
Sbjct: 170  PALLQSGYWGRAAMDPEPGRCRRTDGKKWRCSRDVVTGQKYCERHMHRGRNRSRKPVEIP 229

Query: 664  TPAATKGD-----------LKTPITVAALPITALATGNQFAPSGPSTSANLTQLNQSRAS 810
            TPAA  G              T   +AA P+T +A G  FA SGP  S +L  LN+S   
Sbjct: 230  TPAAAGGGGGAAVXSVGALKSTTAAIAAQPLTTVAGGTHFALSGPPPSIDLLHLNRS-PP 288

Query: 811  ENKMGNGGLLEIQNGRLSDEGRSDGQLLRQFFDDWPRSNQDSD----GVGRNGGPSTTCL 978
            E K  N GL E     +S +GRSDG++LR FFDDWPRS Q+ D    G   +   S+T L
Sbjct: 289  EPKTENKGLFEHXTENVSGDGRSDGRVLRHFFDDWPRSIQEPDNAANGSNNSQATSSTYL 348

Query: 979  SISTPG-GSSDFSLKLSTGNGDEPEYQDGNGREERPQLDWGTGWNAHQVSSMGGPLAEAL 1155
            S+S  G  SSD SLKLSTGNGDE   QD N   ERPQL+W  GW  HQ + MGGPLAEAL
Sbjct: 349  SMSILGHHSSDVSLKLSTGNGDEQSPQDVNAERERPQLNWAAGWGTHQSAQMGGPLAEAL 408

Query: 1156 RSSTSNASPTSVLYELRR 1209
            RS+TSN+SPTSVL++L R
Sbjct: 409  RSATSNSSPTSVLHQLPR 426


>emb|CBI30260.3| unnamed protein product [Vitis vinifera]
          Length = 391

 Score =  343 bits (880), Expect = 6e-92
 Identities = 201/371 (54%), Positives = 236/371 (63%), Gaps = 19/371 (5%)
 Frame = +1

Query: 154  IPRLLLLEPTHQPSPVASALPLFVPEPNSRIITSLSAFSDATTS--RFSGMG-CLFSXXX 324
            +PRLLL        P  SALPLFVPEPNS+I ++LSAF D+TT+  RFS  G   FS   
Sbjct: 1    MPRLLL-----DQQPSGSALPLFVPEPNSKI-SNLSAFPDSTTTATRFSKTGGSYFSLAQ 54

Query: 325  XXXXXXXXXIFKYMIAGAPVPAELLQPIKKSLLNTPAAAACXXXXXXXXXXXXXTMLQSG 504
                     IF++M+AGA VP ELLQ IKKSLLN P                   +LQSG
Sbjct: 55   WQELELQALIFRHMLAGAAVPPELLQLIKKSLLNHPPYYL--QHPLQHYQHYQPALLQSG 112

Query: 505  YWGRNSVDPEPGRCRRTDGKKWRCSREIVPGHKYCERHVHRGRNRSRKLVETPTPAATKG 684
            YWGR ++DPEPGRCRRTDGKKWRCSR++V G KYCERH+HRGRNRSRK VE PTPAA  G
Sbjct: 113  YWGRAAMDPEPGRCRRTDGKKWRCSRDVVTGQKYCERHMHRGRNRSRKPVEIPTPAAAGG 172

Query: 685  D-----------LKTPITVAALPITALATGNQFAPSGPSTSANLTQLNQSRASENKMGNG 831
                          T   +AA P+T +A G  FA SGP  S +L  LN+S   E K  N 
Sbjct: 173  GGGAAVASVGALKSTTAAIAAQPLTTVAGGTHFALSGPPPSIDLLHLNRS-PPEPKTENK 231

Query: 832  GLLEIQNGRLSDEGRSDGQLLRQFFDDWPRSNQDSD----GVGRNGGPSTTCLSISTPG- 996
            GL E +   +S +GRSDG++LR FFDDWPRS Q+ D    G   +   S+T LS+S  G 
Sbjct: 232  GLFEHRTENVSGDGRSDGRVLRHFFDDWPRSIQEPDNAANGSNNSQATSSTYLSMSILGH 291

Query: 997  GSSDFSLKLSTGNGDEPEYQDGNGREERPQLDWGTGWNAHQVSSMGGPLAEALRSSTSNA 1176
             SSD SLKLSTGNGDE   QD N   ERPQL+W  GW  HQ + MGGPLAEALRS+TSN+
Sbjct: 292  HSSDVSLKLSTGNGDEQSPQDVNAERERPQLNWAAGWGTHQSAQMGGPLAEALRSATSNS 351

Query: 1177 SPTSVLYELRR 1209
            SPTSVL++L R
Sbjct: 352  SPTSVLHQLPR 362


>ref|XP_002534110.1| conserved hypothetical protein [Ricinus communis]
            gi|223525833|gb|EEF28270.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 428

 Score =  331 bits (848), Expect = 3e-88
 Identities = 203/418 (48%), Positives = 251/418 (60%), Gaps = 49/418 (11%)
 Frame = +1

Query: 97   MKQWRNQLHESEEQ--QPSAKIPRLLLLEPTHQPSP-----------VASALPLFVPEPN 237
            +KQWRNQ HESEE+  QPS K+P+LLL +P H+P              A+ LPLFVPEP+
Sbjct: 5    LKQWRNQQHESEEEEEQPSEKMPKLLL-DPPHEPQQQEQQHYPISGSTAAPLPLFVPEPH 63

Query: 238  SRIITS-LSAFSDATTS-----RFSGMGC--LFSXXXXXXXXXXXXIFKYMIAGAPVPAE 393
            S    S LSAF D++T+     RF  MG    FS            I++YM+AGA +P E
Sbjct: 64   SNNKNSNLSAFLDSSTAPPATARFPRMGGSGYFSLAQWQELELQALIYRYMLAGAAIPPE 123

Query: 394  LLQPIKKSLLNTPAAAACXXXXXXXXXXXXXTMLQSGYWGRNSVDPEPGRCRRTDGKKWR 573
            LLQPIKKSLL++P                   +LQ+GYWGR ++DPEPGRCRRTDGKKWR
Sbjct: 124  LLQPIKKSLLHSPPYFL--HHPLQHYSYYQPALLQTGYWGRAAMDPEPGRCRRTDGKKWR 181

Query: 574  CSREIVPGHKYCERHVHRGRNRSRKLVETPTPAATKG----------------------- 684
            CSR++V G KYCERHVHRGRNRSRK VE PT  ++                         
Sbjct: 182  CSRDVVAGQKYCERHVHRGRNRSRKPVEIPTTNSSTSTNTNSTGIGGGGGGGSAGGAISA 241

Query: 685  --DLKTPITVAALPITALATGNQFAPSGPSTSANLTQLNQSRASENKMGNGGLLEIQNGR 858
                 +P  VA L ++ +A+G   + SG S S  L  LN +R+S+ K    GLL      
Sbjct: 242  AFSSSSPAIVAPL-LSGVASGTSLSFSGHSPSNELLHLN-NRSSDPKAEIKGLLLGPQNE 299

Query: 859  LSDEGRSDGQLLRQFFDDWPRSNQDSDGVGRNGGP--STTCLSISTPG-GSSDFSLKLST 1029
            +++  RSDG +LR FFDDWPRS Q+ D    N  P  S TCLSIS  G  SSD SLKLST
Sbjct: 300  VAN--RSDGHILRHFFDDWPRSLQEPDNTASNASPMNSATCLSISMSGNSSSDVSLKLST 357

Query: 1030 GNGDEPEYQDGNGREERPQLDWGTGWNAHQVSSMGGPLAEALRSSTSNASPTSVLYEL 1203
            GNG+EP    G+ RE  PQ++W  GW  +Q+S MGGPLAEALRSSTSN+SPTSVL++L
Sbjct: 358  GNGEEPAGSRGSEREHHPQVNWTGGWGTNQMSPMGGPLAEALRSSTSNSSPTSVLHQL 415


>ref|XP_003625769.1| GRL3 [Medicago truncatula] gi|355500784|gb|AES81987.1| GRL3 [Medicago
            truncatula]
          Length = 384

 Score =  315 bits (807), Expect = 2e-83
 Identities = 189/393 (48%), Positives = 246/393 (62%), Gaps = 23/393 (5%)
 Frame = +1

Query: 100  KQWRNQLHESEEQQPSAKIPRLL------LLEPTHQPSPVASALPLFVPEPNSRIITSLS 261
            KQWRNQ HESE+Q  S K+P+LL          +HQ SP   ALPLF+P+PN+++ T+LS
Sbjct: 6    KQWRNQQHESEKQH-STKMPKLLHPAQSQSQSHSHQQSP---ALPLFLPQPNTKV-TNLS 60

Query: 262  AFSDATTSRFS--GMGCLFSXXXXXXXXXXXXIFKYMIAGAPVPAELLQPIKKSLLNTPA 435
              +  + +RF   GMG  FS            IF+YM+ GA VP ELLQPIKKSLL++  
Sbjct: 61   DSALPSNNRFPRIGMGSHFSLSQWQELELQALIFRYMLVGASVPPELLQPIKKSLLHSSP 120

Query: 436  AAACXXXXXXXXXXXXXTMLQSGYWGRNSVDPEPGRCRRTDGKKWRCSREIVPGHKYCER 615
                              +LQSGYWGR ++DPEPGRCRRTDGKKWRC+R++V G KYCER
Sbjct: 121  --------YFLHHYQPTALLQSGYWGRGAMDPEPGRCRRTDGKKWRCARDVVAGQKYCER 172

Query: 616  HVHRGRNRSRKLVETPTPAATKGDLKTPI-TVAALPITALATGNQFAPSGPSTSANLTQL 792
            H+HRGRNRSRK VE PTP +  G   + + ++++ P+   +  + F         + T+ 
Sbjct: 173  HMHRGRNRSRKPVELPTPTSNGGGSFSALSSISSQPLVTSSFKSPF-------DLHFTE- 224

Query: 793  NQSRASENKMGNGGLLEIQNGRLSDEGRSDGQLLRQFFDDWPRSNQDSDGVGRNGGPSTT 972
               R++  K+    L E  +  +  +GR  GQ+LR FFDDWPRS QDSD    NGG S+T
Sbjct: 225  ---RSTGTKIEEKSLCE-SDDHVGGDGRPGGQMLRHFFDDWPRSLQDSDNAENNGGSSST 280

Query: 973  CLSISTPG------GSSDFSLKLSTGNGDEPEYQDGN-------GREERPQLDWGTGWNA 1113
            CLSIS PG       SSD SLKLSTG G+EP  ++ N        ++++ QL+W  GWN+
Sbjct: 281  CLSISMPGNNNTSSSSSDVSLKLSTGYGEEPCPRNENVGLVQTEQQQQQLQLNWIGGWNS 340

Query: 1114 -HQVSSMGGPLAEALRSSTSNASPTSVLYELRR 1209
             +QVSSMGGPLAEALRSSTS +SPTSVL++L R
Sbjct: 341  GNQVSSMGGPLAEALRSSTSTSSPTSVLHQLPR 373


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