BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017779
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319650.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-32
ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containi...   104   3e-31
ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containi...   105   4e-29
ref|XP_003564466.1| PREDICTED: pentatricopeptide repeat-containi...    97   5e-25
tpg|DAA57138.1| TPA: hypothetical protein ZEAMMB73_430226 [Zea m...   100   1e-24

>ref|XP_002319650.1| predicted protein [Populus trichocarpa] gi|222858026|gb|EEE95573.1|
           predicted protein [Populus trichocarpa]
          Length = 705

 Score =  116 bits (291), Expect(2) = 2e-32
 Identities = 53/74 (71%), Positives = 63/74 (85%)
 Frame = +3

Query: 3   QAKSLDQAFDLFVQMRDAGMKPNEVTMVNLLSLCAQAGALDLGKWIHAYIDKEGIIADLI 182
           QA  +D AF LFVQMRD G++PNE+TMV+LLSLCA  GALD+GKW HAYIDK+G+  D+I
Sbjct: 310 QANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVI 369

Query: 183 LSTALVDMYAKCGD 224
           L TAL+DMYAKCGD
Sbjct: 370 LKTALIDMYAKCGD 383



 Score = 47.4 bits (111), Expect(2) = 2e-32
 Identities = 20/43 (46%), Positives = 31/43 (72%)
 Frame = +1

Query: 226 DILRARWIFNKSPARDICMWDAMLCGLAMHGCGEEALELFFQL 354
           DI  A+ +F+++  RDIC W+ M+ G  MHG GE+AL+LF ++
Sbjct: 383 DISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEM 425



 Score = 70.1 bits (170), Expect(2) = 3e-14
 Identities = 33/74 (44%), Positives = 49/74 (66%)
 Frame = +3

Query: 3   QAKSLDQAFDLFVQMRDAGMKPNEVTMVNLLSLCAQAGALDLGKWIHAYIDKEGIIADLI 182
           +   L++   LFV+M +  + PN++TM++L+  C   GA+ LGK +HAYI + G    L 
Sbjct: 209 RCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLA 268

Query: 183 LSTALVDMYAKCGD 224
           L+TALVDMY KCG+
Sbjct: 269 LATALVDMYGKCGE 282



 Score = 32.7 bits (73), Expect(2) = 3e-14
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +1

Query: 226 DILRARWIFNKSPARDICMWDAMLCGLAMHGCGEEALELFFQL 354
           +I  AR IF+    +D+  W AM+   A   C + A +LF Q+
Sbjct: 282 EIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQM 324


>ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 745

 Score =  104 bits (260), Expect(2) = 3e-31
 Identities = 47/70 (67%), Positives = 60/70 (85%)
 Frame = +3

Query: 15  LDQAFDLFVQMRDAGMKPNEVTMVNLLSLCAQAGALDLGKWIHAYIDKEGIIADLILSTA 194
           +DQ F+LFV+M +  +KPN VTMV+LLSLCA+AGALDLGKW HAYI++ G+  D+IL TA
Sbjct: 374 MDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETA 433

Query: 195 LVDMYAKCGD 224
           L++MYAKCGD
Sbjct: 434 LINMYAKCGD 443



 Score = 55.5 bits (132), Expect(2) = 3e-31
 Identities = 23/43 (53%), Positives = 33/43 (76%)
 Frame = +1

Query: 226 DILRARWIFNKSPARDICMWDAMLCGLAMHGCGEEALELFFQL 354
           D+  AR +FN++  RDI MW+ M+ G +MHGCG+EALELF ++
Sbjct: 443 DVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEM 485



 Score = 70.9 bits (172), Expect(2) = 1e-12
 Identities = 32/69 (46%), Positives = 45/69 (65%)
 Frame = +3

Query: 15  LDQAFDLFVQMRDAGMKPNEVTMVNLLSLCAQAGALDLGKWIHAYIDKEGIIADLILSTA 194
           LD+    F +M +  + PNE+T+++L++ C   G LDLGKW HAY+ + G    L L TA
Sbjct: 273 LDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTA 332

Query: 195 LVDMYAKCG 221
           L+DMY KCG
Sbjct: 333 LIDMYGKCG 341



 Score = 26.9 bits (58), Expect(2) = 1e-12
 Identities = 10/39 (25%), Positives = 20/39 (51%)
 Frame = +1

Query: 238 ARWIFNKSPARDICMWDAMLCGLAMHGCGEEALELFFQL 354
           AR +FN    +D+ +W  ++   A   C ++   LF ++
Sbjct: 346 ARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEM 384


>ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 801

 Score =  105 bits (262), Expect(2) = 4e-29
 Identities = 46/81 (56%), Positives = 63/81 (77%)
 Frame = +3

Query: 3   QAKSLDQAFDLFVQMRDAGMKPNEVTMVNLLSLCAQAGALDLGKWIHAYIDKEGIIADLI 182
           Q   +D+AFD+FV M   G++PNE TMV+LL +CA+AG+L++GKWIH+YIDK+GI  D+I
Sbjct: 406 QNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMI 465

Query: 183 LSTALVDMYAKCGDGHTTSKM 245
           L T+ VDMYA CGD  T  ++
Sbjct: 466 LKTSFVDMYANCGDIDTAHRL 486



 Score = 47.8 bits (112), Expect(2) = 4e-29
 Identities = 23/43 (53%), Positives = 30/43 (69%)
 Frame = +1

Query: 226 DILRARWIFNKSPARDICMWDAMLCGLAMHGCGEEALELFFQL 354
           DI  A  +F ++  RDI MW+AM+ G AMHG GE ALELF ++
Sbjct: 479 DIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEM 521



 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 35/71 (49%), Positives = 50/71 (70%)
 Frame = +3

Query: 12  SLDQAFDLFVQMRDAGMKPNEVTMVNLLSLCAQAGALDLGKWIHAYIDKEGIIADLILST 191
           +L++   LFV+M   GM PNE+TM++L+  C  AGAL+LGK +HA+  + G    L+L+T
Sbjct: 308 NLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLAT 367

Query: 192 ALVDMYAKCGD 224
           A +DMY KCGD
Sbjct: 368 AFIDMYGKCGD 378


>ref|XP_003564466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Brachypodium distachyon]
          Length = 600

 Score = 97.1 bits (240), Expect(2) = 5e-25
 Identities = 43/69 (62%), Positives = 58/69 (84%)
 Frame = +3

Query: 15  LDQAFDLFVQMRDAGMKPNEVTMVNLLSLCAQAGALDLGKWIHAYIDKEGIIADLILSTA 194
           +++A  LF  M+  G+ P+EVTMV+++S CA+AGALDLGKW+HA+ID++GI  DL LSTA
Sbjct: 210 VNEALGLFRDMQAVGVNPDEVTMVSVISACAKAGALDLGKWVHAFIDRKGITVDLELSTA 269

Query: 195 LVDMYAKCG 221
           L+DMYAKCG
Sbjct: 270 LIDMYAKCG 278



 Score = 42.4 bits (98), Expect(2) = 5e-25
 Identities = 20/42 (47%), Positives = 27/42 (64%)
 Frame = +1

Query: 229 ILRARWIFNKSPARDICMWDAMLCGLAMHGCGEEALELFFQL 354
           I RA+ +F+    RD   W AM+ GLAMHG  E+AL LF ++
Sbjct: 280 IERAKSVFDSMVERDTKAWSAMIVGLAMHGLAEDALGLFSRM 321


>tpg|DAA57138.1| TPA: hypothetical protein ZEAMMB73_430226 [Zea mays]
          Length = 648

 Score = 99.8 bits (247), Expect(2) = 1e-24
 Identities = 44/69 (63%), Positives = 60/69 (86%)
 Frame = +3

Query: 15  LDQAFDLFVQMRDAGMKPNEVTMVNLLSLCAQAGALDLGKWIHAYIDKEGIIADLILSTA 194
           +++A  LF +M+  G++P+EVTMV+++S CA+AGALDLGKW+HAYID++GI  DL LSTA
Sbjct: 258 VNEALGLFREMQAVGVEPDEVTMVSVISACAKAGALDLGKWVHAYIDRKGITVDLELSTA 317

Query: 195 LVDMYAKCG 221
           L+DMYAKCG
Sbjct: 318 LIDMYAKCG 326



 Score = 38.1 bits (87), Expect(2) = 1e-24
 Identities = 18/42 (42%), Positives = 26/42 (61%)
 Frame = +1

Query: 229 ILRARWIFNKSPARDICMWDAMLCGLAMHGCGEEALELFFQL 354
           I RAR +F+    +D   W AM+ G A+HG  E+AL LF ++
Sbjct: 328 IERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLFSRM 369