BLASTX nr result
ID: Coptis21_contig00017779
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00017779 (355 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002319650.1| predicted protein [Populus trichocarpa] gi|2... 116 2e-32 ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containi... 104 3e-31 ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containi... 105 4e-29 ref|XP_003564466.1| PREDICTED: pentatricopeptide repeat-containi... 97 5e-25 tpg|DAA57138.1| TPA: hypothetical protein ZEAMMB73_430226 [Zea m... 100 1e-24 >ref|XP_002319650.1| predicted protein [Populus trichocarpa] gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa] Length = 705 Score = 116 bits (291), Expect(2) = 2e-32 Identities = 53/74 (71%), Positives = 63/74 (85%) Frame = +3 Query: 3 QAKSLDQAFDLFVQMRDAGMKPNEVTMVNLLSLCAQAGALDLGKWIHAYIDKEGIIADLI 182 QA +D AF LFVQMRD G++PNE+TMV+LLSLCA GALD+GKW HAYIDK+G+ D+I Sbjct: 310 QANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVI 369 Query: 183 LSTALVDMYAKCGD 224 L TAL+DMYAKCGD Sbjct: 370 LKTALIDMYAKCGD 383 Score = 47.4 bits (111), Expect(2) = 2e-32 Identities = 20/43 (46%), Positives = 31/43 (72%) Frame = +1 Query: 226 DILRARWIFNKSPARDICMWDAMLCGLAMHGCGEEALELFFQL 354 DI A+ +F+++ RDIC W+ M+ G MHG GE+AL+LF ++ Sbjct: 383 DISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEM 425 Score = 70.1 bits (170), Expect(2) = 3e-14 Identities = 33/74 (44%), Positives = 49/74 (66%) Frame = +3 Query: 3 QAKSLDQAFDLFVQMRDAGMKPNEVTMVNLLSLCAQAGALDLGKWIHAYIDKEGIIADLI 182 + L++ LFV+M + + PN++TM++L+ C GA+ LGK +HAYI + G L Sbjct: 209 RCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLA 268 Query: 183 LSTALVDMYAKCGD 224 L+TALVDMY KCG+ Sbjct: 269 LATALVDMYGKCGE 282 Score = 32.7 bits (73), Expect(2) = 3e-14 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +1 Query: 226 DILRARWIFNKSPARDICMWDAMLCGLAMHGCGEEALELFFQL 354 +I AR IF+ +D+ W AM+ A C + A +LF Q+ Sbjct: 282 EIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQM 324 >ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like [Cucumis sativus] Length = 745 Score = 104 bits (260), Expect(2) = 3e-31 Identities = 47/70 (67%), Positives = 60/70 (85%) Frame = +3 Query: 15 LDQAFDLFVQMRDAGMKPNEVTMVNLLSLCAQAGALDLGKWIHAYIDKEGIIADLILSTA 194 +DQ F+LFV+M + +KPN VTMV+LLSLCA+AGALDLGKW HAYI++ G+ D+IL TA Sbjct: 374 MDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETA 433 Query: 195 LVDMYAKCGD 224 L++MYAKCGD Sbjct: 434 LINMYAKCGD 443 Score = 55.5 bits (132), Expect(2) = 3e-31 Identities = 23/43 (53%), Positives = 33/43 (76%) Frame = +1 Query: 226 DILRARWIFNKSPARDICMWDAMLCGLAMHGCGEEALELFFQL 354 D+ AR +FN++ RDI MW+ M+ G +MHGCG+EALELF ++ Sbjct: 443 DVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEM 485 Score = 70.9 bits (172), Expect(2) = 1e-12 Identities = 32/69 (46%), Positives = 45/69 (65%) Frame = +3 Query: 15 LDQAFDLFVQMRDAGMKPNEVTMVNLLSLCAQAGALDLGKWIHAYIDKEGIIADLILSTA 194 LD+ F +M + + PNE+T+++L++ C G LDLGKW HAY+ + G L L TA Sbjct: 273 LDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTA 332 Query: 195 LVDMYAKCG 221 L+DMY KCG Sbjct: 333 LIDMYGKCG 341 Score = 26.9 bits (58), Expect(2) = 1e-12 Identities = 10/39 (25%), Positives = 20/39 (51%) Frame = +1 Query: 238 ARWIFNKSPARDICMWDAMLCGLAMHGCGEEALELFFQL 354 AR +FN +D+ +W ++ A C ++ LF ++ Sbjct: 346 ARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEM 384 >ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like [Glycine max] Length = 801 Score = 105 bits (262), Expect(2) = 4e-29 Identities = 46/81 (56%), Positives = 63/81 (77%) Frame = +3 Query: 3 QAKSLDQAFDLFVQMRDAGMKPNEVTMVNLLSLCAQAGALDLGKWIHAYIDKEGIIADLI 182 Q +D+AFD+FV M G++PNE TMV+LL +CA+AG+L++GKWIH+YIDK+GI D+I Sbjct: 406 QNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMI 465 Query: 183 LSTALVDMYAKCGDGHTTSKM 245 L T+ VDMYA CGD T ++ Sbjct: 466 LKTSFVDMYANCGDIDTAHRL 486 Score = 47.8 bits (112), Expect(2) = 4e-29 Identities = 23/43 (53%), Positives = 30/43 (69%) Frame = +1 Query: 226 DILRARWIFNKSPARDICMWDAMLCGLAMHGCGEEALELFFQL 354 DI A +F ++ RDI MW+AM+ G AMHG GE ALELF ++ Sbjct: 479 DIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEM 521 Score = 78.2 bits (191), Expect = 7e-13 Identities = 35/71 (49%), Positives = 50/71 (70%) Frame = +3 Query: 12 SLDQAFDLFVQMRDAGMKPNEVTMVNLLSLCAQAGALDLGKWIHAYIDKEGIIADLILST 191 +L++ LFV+M GM PNE+TM++L+ C AGAL+LGK +HA+ + G L+L+T Sbjct: 308 NLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLAT 367 Query: 192 ALVDMYAKCGD 224 A +DMY KCGD Sbjct: 368 AFIDMYGKCGD 378 >ref|XP_003564466.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980-like [Brachypodium distachyon] Length = 600 Score = 97.1 bits (240), Expect(2) = 5e-25 Identities = 43/69 (62%), Positives = 58/69 (84%) Frame = +3 Query: 15 LDQAFDLFVQMRDAGMKPNEVTMVNLLSLCAQAGALDLGKWIHAYIDKEGIIADLILSTA 194 +++A LF M+ G+ P+EVTMV+++S CA+AGALDLGKW+HA+ID++GI DL LSTA Sbjct: 210 VNEALGLFRDMQAVGVNPDEVTMVSVISACAKAGALDLGKWVHAFIDRKGITVDLELSTA 269 Query: 195 LVDMYAKCG 221 L+DMYAKCG Sbjct: 270 LIDMYAKCG 278 Score = 42.4 bits (98), Expect(2) = 5e-25 Identities = 20/42 (47%), Positives = 27/42 (64%) Frame = +1 Query: 229 ILRARWIFNKSPARDICMWDAMLCGLAMHGCGEEALELFFQL 354 I RA+ +F+ RD W AM+ GLAMHG E+AL LF ++ Sbjct: 280 IERAKSVFDSMVERDTKAWSAMIVGLAMHGLAEDALGLFSRM 321 >tpg|DAA57138.1| TPA: hypothetical protein ZEAMMB73_430226 [Zea mays] Length = 648 Score = 99.8 bits (247), Expect(2) = 1e-24 Identities = 44/69 (63%), Positives = 60/69 (86%) Frame = +3 Query: 15 LDQAFDLFVQMRDAGMKPNEVTMVNLLSLCAQAGALDLGKWIHAYIDKEGIIADLILSTA 194 +++A LF +M+ G++P+EVTMV+++S CA+AGALDLGKW+HAYID++GI DL LSTA Sbjct: 258 VNEALGLFREMQAVGVEPDEVTMVSVISACAKAGALDLGKWVHAYIDRKGITVDLELSTA 317 Query: 195 LVDMYAKCG 221 L+DMYAKCG Sbjct: 318 LIDMYAKCG 326 Score = 38.1 bits (87), Expect(2) = 1e-24 Identities = 18/42 (42%), Positives = 26/42 (61%) Frame = +1 Query: 229 ILRARWIFNKSPARDICMWDAMLCGLAMHGCGEEALELFFQL 354 I RAR +F+ +D W AM+ G A+HG E+AL LF ++ Sbjct: 328 IERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLFSRM 369