BLASTX nr result

ID: Coptis21_contig00017776 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017776
         (1156 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_197933.1| protein phosphatase 2A regulatory B subunit [Ar...   322   1e-85
ref|XP_002874266.1| hypothetical protein ARALYDRAFT_489409 [Arab...   321   2e-85
ref|XP_003567932.1| PREDICTED: serine/threonine protein phosphat...   315   1e-83
ref|XP_002284526.1| PREDICTED: serine/threonine protein phosphat...   311   2e-82
ref|XP_002284853.2| PREDICTED: serine/threonine protein phosphat...   309   8e-82

>ref|NP_197933.1| protein phosphatase 2A regulatory B subunit [Arabidopsis thaliana]
            gi|75163671|sp|Q93YV6.1|2A5I_ARATH RecName:
            Full=Serine/threonine protein phosphatase 2A 57 kDa
            regulatory subunit B' iota isoform; Short=AtB' iota;
            Short=PP2A, B' subunit, iota isoform
            gi|16604607|gb|AAL24096.1| putative AtBgamma protein
            [Arabidopsis thaliana] gi|23296589|gb|AAN13126.1|
            putative AtBgamma protein [Arabidopsis thaliana]
            gi|332006073|gb|AED93456.1| protein phosphatase 2A
            regulatory B subunit [Arabidopsis thaliana]
          Length = 500

 Score =  322 bits (824), Expect = 1e-85
 Identities = 161/241 (66%), Positives = 189/241 (78%)
 Frame = +2

Query: 434  MLKQLLNRLPRKSSKXXXXXXXXXXXXXXXXTVSGTRIQRSNSANVVPNRTNALKRMSSA 613
            M KQ L++LPRKSSK                 V  +      S    P R+N+ KRMSSA
Sbjct: 1    MFKQFLSKLPRKSSKSDSGELNRSSSGPVSSPVQRSGTSGGGSG---PVRSNSGKRMSSA 57

Query: 614  VFPSTVVTGIEPLLSFKDVSTQEKQNLFVSKLNLCCVVFDFSDPNKNSLEKDVKRQTLIE 793
            VFP++VV GIEPL+ FKDV + EK NLFVSK++LCCV FDFSDP KNS+EKDVKRQTL+E
Sbjct: 58   VFPASVVAGIEPLVPFKDVPSSEKLNLFVSKVSLCCVTFDFSDPGKNSIEKDVKRQTLLE 117

Query: 794  LVDFVASGSARFTEPVIAGICKMSAVNLFRVFPPNYRSSLNGAEADDDEPVFDPSWSHLQ 973
            L+DFVASGS +FTEP I  +C+M AVNLFRVFPPNYRSS +G E DDDEP+FDP+W HLQ
Sbjct: 118  LLDFVASGSVKFTEPAILAMCRMCAVNLFRVFPPNYRSS-SGGENDDDEPMFDPAWPHLQ 176

Query: 974  VVYDILLRFITCGSLDAKVAKKYIDHSFILRLLDLFDSEDPRERDCLKTILHRIYGKFMV 1153
            +VYD+LL+FIT   LDAKVAKKY+DH+FI+RLLDLFDSEDPRER+CLKTILHR+YGKFMV
Sbjct: 177  IVYDLLLKFITSPCLDAKVAKKYLDHAFIVRLLDLFDSEDPRERECLKTILHRVYGKFMV 236

Query: 1154 H 1156
            H
Sbjct: 237  H 237


>ref|XP_002874266.1| hypothetical protein ARALYDRAFT_489409 [Arabidopsis lyrata subsp.
            lyrata] gi|297320103|gb|EFH50525.1| hypothetical protein
            ARALYDRAFT_489409 [Arabidopsis lyrata subsp. lyrata]
          Length = 499

 Score =  321 bits (823), Expect = 2e-85
 Identities = 162/242 (66%), Positives = 193/242 (79%), Gaps = 1/242 (0%)
 Frame = +2

Query: 434  MLKQLLNRLPRKSSKXXXXXXXXXXXXXXXXTVSGTRIQRSN-SANVVPNRTNALKRMSS 610
            M KQ L++LPRKSSK                    + +QRS  SA   P R+N+ KRMSS
Sbjct: 1    MFKQFLSKLPRKSSKSDSGELNRSSSGPV-----SSPVQRSGTSAGSGPVRSNSGKRMSS 55

Query: 611  AVFPSTVVTGIEPLLSFKDVSTQEKQNLFVSKLNLCCVVFDFSDPNKNSLEKDVKRQTLI 790
            AVFP++VV GIEPL+ FKDV + EK NLFVSK++LCCV FDFS+P KNS+EKDVKRQTL+
Sbjct: 56   AVFPASVVAGIEPLVPFKDVPSSEKLNLFVSKVSLCCVTFDFSEPGKNSIEKDVKRQTLL 115

Query: 791  ELVDFVASGSARFTEPVIAGICKMSAVNLFRVFPPNYRSSLNGAEADDDEPVFDPSWSHL 970
            EL+DFVASGS +FTEP I  +C+M AVNLFRVFPPNYRSS +G E DDDEP+FDP+W HL
Sbjct: 116  ELLDFVASGSVKFTEPAILAMCRMCAVNLFRVFPPNYRSS-SGGENDDDEPMFDPAWPHL 174

Query: 971  QVVYDILLRFITCGSLDAKVAKKYIDHSFILRLLDLFDSEDPRERDCLKTILHRIYGKFM 1150
            Q+VYD+LL+FIT   LDAK+AKKY+DH+FI+RLLDLFDSEDPRER+CLKTILHR+YGKFM
Sbjct: 175  QIVYDLLLKFITSPCLDAKLAKKYLDHAFIVRLLDLFDSEDPRERECLKTILHRVYGKFM 234

Query: 1151 VH 1156
            VH
Sbjct: 235  VH 236


>ref|XP_003567932.1| PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory
            subunit B' iota isoform-like [Brachypodium distachyon]
          Length = 506

 Score =  315 bits (808), Expect = 1e-83
 Identities = 159/243 (65%), Positives = 188/243 (77%), Gaps = 2/243 (0%)
 Frame = +2

Query: 434  MLKQLLNRLPRKSSKXXXXXXXXXXXXXXXXTVSGTRIQRSNSANVVP--NRTNALKRMS 607
            M KQ L++LPRKSS                   +G+ IQR++S   +P    T+ +KRMS
Sbjct: 1    MWKQFLSKLPRKSSGSGRDDFDSGQCSNG----NGSSIQRTSSCGSIPAGRSTSTIKRMS 56

Query: 608  SAVFPSTVVTGIEPLLSFKDVSTQEKQNLFVSKLNLCCVVFDFSDPNKNSLEKDVKRQTL 787
            SAVFPS+VV GIEPL+SFKDV   EKQNLFVSKLNLCC VFDFSDP+K+S EKD+KRQTL
Sbjct: 57   SAVFPSSVVAGIEPLVSFKDVPNSEKQNLFVSKLNLCCAVFDFSDPSKSSAEKDIKRQTL 116

Query: 788  IELVDFVASGSARFTEPVIAGICKMSAVNLFRVFPPNYRSSLNGAEADDDEPVFDPSWSH 967
            ++LVDFV S S+RF+E VIA   +M AVNLFRVFPPNYRS   G E D+DEP+FDP+W H
Sbjct: 117  LDLVDFVDSSSSRFSEAVIAACSRMFAVNLFRVFPPNYRSGSGGGEGDEDEPMFDPAWCH 176

Query: 968  LQVVYDILLRFITCGSLDAKVAKKYIDHSFILRLLDLFDSEDPRERDCLKTILHRIYGKF 1147
            LQ+VY++LL+FI   SLDAK+ KKY DHSFI+RLL+L DSEDPRERDCLKTILHRIYGKF
Sbjct: 177  LQLVYELLLKFIGSNSLDAKIGKKYFDHSFIVRLLNLLDSEDPRERDCLKTILHRIYGKF 236

Query: 1148 MVH 1156
            MVH
Sbjct: 237  MVH 239


>ref|XP_002284526.1| PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory
            subunit B' iota isoform [Vitis vinifera]
          Length = 492

 Score =  311 bits (798), Expect = 2e-82
 Identities = 159/241 (65%), Positives = 186/241 (77%)
 Frame = +2

Query: 434  MLKQLLNRLPRKSSKXXXXXXXXXXXXXXXXTVSGTRIQRSNSANVVPNRTNALKRMSSA 613
            MLKQ+L+RLPRK+ K                T +GT   RS+S +     T+A K  +S+
Sbjct: 1    MLKQILSRLPRKALKAESGDLVR--------TDTGT--PRSSSGSPGSRPTSAKK--TSS 48

Query: 614  VFPSTVVTGIEPLLSFKDVSTQEKQNLFVSKLNLCCVVFDFSDPNKNSLEKDVKRQTLIE 793
            VFP+  V G+EP  +F DV   EK NLFVSKLNLCC VFDF+DP+KNS+EKDVKRQTLIE
Sbjct: 49   VFPTNAVAGVEPSAAFNDVPIAEKLNLFVSKLNLCCTVFDFNDPSKNSIEKDVKRQTLIE 108

Query: 794  LVDFVASGSARFTEPVIAGICKMSAVNLFRVFPPNYRSSLNGAEADDDEPVFDPSWSHLQ 973
            LVDF+ SG  RFTEPVIA +CKM A NLFRVFPPNYRS+  G E DDDEP FDP+WSHLQ
Sbjct: 109  LVDFMVSGPPRFTEPVIAAMCKMCATNLFRVFPPNYRSNSLGGENDDDEPTFDPAWSHLQ 168

Query: 974  VVYDILLRFITCGSLDAKVAKKYIDHSFILRLLDLFDSEDPRERDCLKTILHRIYGKFMV 1153
            +VYD+LL+F+T   LDAKVAKKYIDHSF+LRLLDLFD+EDPRER+CLKT+LHRIYGKFMV
Sbjct: 169  LVYDLLLKFVTSSCLDAKVAKKYIDHSFVLRLLDLFDTEDPRERECLKTVLHRIYGKFMV 228

Query: 1154 H 1156
            H
Sbjct: 229  H 229


>ref|XP_002284853.2| PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory
            subunit B' iota isoform [Vitis vinifera]
          Length = 540

 Score =  309 bits (792), Expect = 8e-82
 Identities = 160/244 (65%), Positives = 185/244 (75%), Gaps = 3/244 (1%)
 Frame = +2

Query: 434  MLKQLLNRLPRKSSKXXXXXXXXXXXXXXXXTVSGTRIQRSNSANVVPNRTNALKRMSSA 613
            M+KQ+L++LPRKSSK                T  G+ IQ SN  NVV       +RMSSA
Sbjct: 42   MIKQILSKLPRKSSKSDTLASAGSDSNNN--TNLGSSIQCSNGLNVV-------RRMSSA 92

Query: 614  VFPSTVVTG---IEPLLSFKDVSTQEKQNLFVSKLNLCCVVFDFSDPNKNSLEKDVKRQT 784
            VFPS V  G   +EP LSFKDV   EKQ LFVSKLNLCCVV+ F+DP+K+  EKD KRQ 
Sbjct: 93   VFPSMVAAGAEAVEPHLSFKDVPNTEKQKLFVSKLNLCCVVYHFNDPDKDQAEKDSKRQA 152

Query: 785  LIELVDFVASGSARFTEPVIAGICKMSAVNLFRVFPPNYRSSLNGAEADDDEPVFDPSWS 964
            LIELVDFVASGSA+F+E  IA  CKM A+NLFR FPP YRS+  G E +D+EP+FDP+WS
Sbjct: 153  LIELVDFVASGSAKFSEAAIAATCKMCAINLFRDFPPKYRSNSTGGETEDEEPMFDPAWS 212

Query: 965  HLQVVYDILLRFITCGSLDAKVAKKYIDHSFILRLLDLFDSEDPRERDCLKTILHRIYGK 1144
            HLQ+VYD+LLRF++  SLD KVAKKY+DHSFILRLL+LFDSEDPRERDCLKTILHRIYGK
Sbjct: 213  HLQIVYDLLLRFVSYSSLDVKVAKKYVDHSFILRLLELFDSEDPRERDCLKTILHRIYGK 272

Query: 1145 FMVH 1156
            FMVH
Sbjct: 273  FMVH 276


Top